BLASTX nr result

ID: Aconitum21_contig00006460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006460
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525006.1| RNA-binding protein with multiple splicing, ...   209   1e-51
ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797...   204   4e-50
ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-...   204   4e-50
ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotei...   201   2e-49
ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829...   201   2e-49

>ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
           communis] gi|223535714|gb|EEF37378.1| RNA-binding
           protein with multiple splicing, putative [Ricinus
           communis]
          Length = 337

 Score =  209 bits (532), Expect = 1e-51
 Identities = 100/132 (75%), Positives = 113/132 (85%), Gaps = 1/132 (0%)
 Frame = +2

Query: 8   YPAP-VPMQAPAPLPAPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSVQPGFK 184
           YP P VPM APAP+PAPS Y PVQN+KDNPPCNTLFIGNLGEN+ E+ELR LFSVQPGFK
Sbjct: 201 YPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTLFIGNLGENINEDELRGLFSVQPGFK 260

Query: 185 QMKLLRQERNTVCFIEFNDMGSATNVHQKLQGAVIPSSGRGGIRIQYSKNPFGRRKDGLN 364
           QMK+LRQER+TVCFIEF D+ SA+NVH+ LQGAVIPSSG  G+RIQYSKNPFG+RKDG +
Sbjct: 261 QMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVIPSSGSVGMRIQYSKNPFGKRKDGSH 320

Query: 365 AAGGPEANWA*P 400
           +   P AN A P
Sbjct: 321 SVASPSANGAPP 332


>ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
          Length = 320

 Score =  204 bits (518), Expect = 4e-50
 Identities = 102/132 (77%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
 Frame = +2

Query: 8   YP-APVPMQAPAPLPAPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSVQPGFK 184
           YP APVPM  PAP+PAPS Y PVQN+KDNPPCNTLFIGNLGEN+ EEE+R LFSVQPGFK
Sbjct: 185 YPVAPVPMPTPAPIPAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFK 244

Query: 185 QMKLLRQERNTVCFIEFNDMGSATNVHQKLQGAVIPSSGRGGIRIQYSKNPFGRRKDGLN 364
           QMK+LRQER+TVCFIEF D+ SATNVH  LQGAVIPSSG  G+RIQYSKNPFG+RKD L 
Sbjct: 245 QMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYSKNPFGKRKDNLP 304

Query: 365 AAGGPEANWA*P 400
            A  P AN A P
Sbjct: 305 IA-VPSANGAPP 315


>ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
          Length = 328

 Score =  204 bits (518), Expect = 4e-50
 Identities = 100/131 (76%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
 Frame = +2

Query: 5   AYPAP-VPMQAPAPLPAPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSVQPGF 181
           AYP P VPM APAP+PAPS Y PVQN+KDNPPCNTLFIGNLGEN+ EEELR LFSVQPGF
Sbjct: 191 AYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEELRGLFSVQPGF 250

Query: 182 KQMKLLRQERNTVCFIEFNDMGSATNVHQKLQGAVIPSSGRGGIRIQYSKNPFGRRKDGL 361
           KQMK+LRQER+TVCFIEF DM +ATNVH  LQGAVIPSSG  G+RIQYSKNPFG+RKD  
Sbjct: 251 KQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQYSKNPFGKRKDSG 310

Query: 362 NAAGGPEANWA 394
           +      AN A
Sbjct: 311 HPVAVAGANGA 321


>ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus] gi|449515829|ref|XP_004164950.1| PREDICTED: U1
           small nuclear ribonucleoprotein A-like [Cucumis sativus]
          Length = 335

 Score =  201 bits (512), Expect = 2e-49
 Identities = 97/128 (75%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
 Frame = +2

Query: 8   YPAP-VPMQAPAPLPAPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSVQPGFK 184
           YP P VPM APAP+PAPS Y PVQN+KDNPPCNTLFIGNLGENV EEELR LFSVQPGFK
Sbjct: 199 YPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENVNEEELRGLFSVQPGFK 258

Query: 185 QMKLLRQERNTVCFIEFNDMGSATNVHQKLQGAVIPSSGRGGIRIQYSKNPFGRRKDGLN 364
           QMK+LRQER+TVCFIEF D+ +ATNVH  LQGAVIPSSG  G+RIQ+SKNPFG+RKD   
Sbjct: 259 QMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVGMRIQFSKNPFGKRKDAAY 318

Query: 365 AAGGPEAN 388
               P  N
Sbjct: 319 PVSAPGVN 326


>ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829014 [Brachypodium
           distachyon]
          Length = 317

 Score =  201 bits (512), Expect = 2e-49
 Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
 Frame = +2

Query: 5   AYPAP-VPMQAPAPLPAPSGYAPVQNSKDNPPCNTLFIGNLGENVIEEELRNLFSVQPGF 181
           AYP P VPM +P+PLP P+ YAPVQN+KDNPPCNTLFIGNLGE V+EEELR LFSVQPGF
Sbjct: 185 AYPVPPVPMASPSPLPGPTAYAPVQNTKDNPPCNTLFIGNLGETVVEEELRGLFSVQPGF 244

Query: 182 KQMKLLRQERNTVCFIEFNDMGSATNVHQKLQGAVIPSSGRGGIRIQYSKNPFGRRKDGL 361
           KQMK+LRQ+RNTVCFIEF+D+ +A+ VH  LQGAVIPSSGRGG+RIQ+SKNPFGRRKD +
Sbjct: 245 KQMKVLRQDRNTVCFIEFDDVSAASAVHHTLQGAVIPSSGRGGMRIQFSKNPFGRRKDLV 304

Query: 362 NAAGG 376
               G
Sbjct: 305 GGMAG 309


Top