BLASTX nr result

ID: Aconitum21_contig00006343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006343
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vit...   158   1e-36
pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofacto...   154   1e-35
ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thali...   154   1e-35
ref|XP_003617682.1| Tubulin-specific chaperone A [Medicago trunc...   150   2e-34
gb|ABK27074.1| unknown [Picea sitchensis]                             150   2e-34

>ref|XP_002270593.1| PREDICTED: tubulin-specific chaperone A [Vitis vinifera]
           gi|147854591|emb|CAN82778.1| hypothetical protein
           VITISV_011414 [Vitis vinifera]
           gi|297734639|emb|CBI16690.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = -3

Query: 592 MATLRNLKIKTGTCKRVIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 413
           MAT+RNLKIKT TCKR+IKE HSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATIRNLKIKTSTCKRIIKEFHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 412 MIPDCRKRLESSLADIKETLAELETDQQ 329
           MIPDCRKRLE+SLAD+K TLAELE   Q
Sbjct: 61  MIPDCRKRLEASLADLKGTLAELEESNQ 88


>pdb|3MXZ|A Chain A, Crystal Structure Of Tubulin Folding Cofactor A From
           Arabidopsis Thaliana
          Length = 116

 Score =  154 bits (390), Expect = 1e-35
 Identities = 76/89 (85%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = -3

Query: 592 MATLRNLKIKTGTCKRVIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 413
           MAT+RNLKIKT TCKR++KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 4   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 63

Query: 412 MIPDCRKRLESSLADIKETLAEL-ETDQQ 329
           MIPDC KRLES+LAD+K TLAEL ETD++
Sbjct: 64  MIPDCHKRLESALADLKSTLAELEETDEK 92


>ref|NP_565699.1| tubulin-specific chaperone A [Arabidopsis thaliana]
           gi|334184582|ref|NP_001189640.1| tubulin-specific
           chaperone A [Arabidopsis thaliana]
           gi|21542453|sp|O04350.2|TBCA_ARATH RecName:
           Full=Tubulin-specific chaperone A; AltName:
           Full=TCP1-chaperonin cofactor A; AltName:
           Full=Tubulin-folding cofactor A; Short=CFA
           gi|20514257|gb|AAM22957.1|AF486848_1 tubulin folding
           cofactor A [Arabidopsis thaliana]
           gi|15293037|gb|AAK93629.1| putative TCP1-chaperonin
           cofactor A isolog [Arabidopsis thaliana]
           gi|20196887|gb|AAM14821.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana] gi|20198325|gb|AAB63093.2|
           TCP1-chaperonin cofactor A isolog [Arabidopsis thaliana]
           gi|20259135|gb|AAM14283.1| putative TCP1-chaperonin
           cofactor A protein [Arabidopsis thaliana]
           gi|21553949|gb|AAM63030.1| TCP1-chaperonin cofactor A
           isolog [Arabidopsis thaliana]
           gi|330253289|gb|AEC08383.1| tubulin-specific chaperone A
           [Arabidopsis thaliana] gi|330253290|gb|AEC08384.1|
           tubulin-specific chaperone A [Arabidopsis thaliana]
          Length = 113

 Score =  154 bits (390), Expect = 1e-35
 Identities = 76/89 (85%), Positives = 84/89 (94%), Gaps = 1/89 (1%)
 Frame = -3

Query: 592 MATLRNLKIKTGTCKRVIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 413
           MAT+RNLKIKT TCKR++KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRM
Sbjct: 1   MATIRNLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRM 60

Query: 412 MIPDCRKRLESSLADIKETLAEL-ETDQQ 329
           MIPDC KRLES+LAD+K TLAEL ETD++
Sbjct: 61  MIPDCHKRLESALADLKSTLAELEETDEK 89


>ref|XP_003617682.1| Tubulin-specific chaperone A [Medicago truncatula]
           gi|355519017|gb|AET00641.1| Tubulin-specific chaperone A
           [Medicago truncatula]
          Length = 293

 Score =  150 bits (380), Expect = 2e-34
 Identities = 76/105 (72%), Positives = 87/105 (82%), Gaps = 2/105 (1%)
 Frame = -3

Query: 637 SHNSPKPRCCSIQVEMATLRNLKIKTGTCKRVIKELHSYEKEVEREAAKTADMKEKGADP 458
           SH   K  C  ++  M T+R+LKIKT TCKR++KELHSYEKEVEREAAKTADMK KGADP
Sbjct: 165 SHRVNKNTCLMVENSMDTVRSLKIKTSTCKRLVKELHSYEKEVEREAAKTADMKNKGADP 224

Query: 457 YDLKQQENVLAESRMMIPDCRKRLESSLADIKETLAEL--ETDQQ 329
           YDLKQQENVL ESRMMIPDCRKRLE++L D+K  LAEL  ETD++
Sbjct: 225 YDLKQQENVLGESRMMIPDCRKRLEAALEDLKGILAELLNETDKK 269


>gb|ABK27074.1| unknown [Picea sitchensis]
          Length = 112

 Score =  150 bits (380), Expect = 2e-34
 Identities = 74/88 (84%), Positives = 81/88 (92%)
 Frame = -3

Query: 592 MATLRNLKIKTGTCKRVIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRM 413
           MATL+ LKIKTGTCKRV+KELHSYEKEV+REAAKTADMKEKGADPYDLKQQENVLAESRM
Sbjct: 1   MATLKTLKIKTGTCKRVLKELHSYEKEVDREAAKTADMKEKGADPYDLKQQENVLAESRM 60

Query: 412 MIPDCRKRLESSLADIKETLAELETDQQ 329
           M+PDCRKRLES+L D++  LAELE   Q
Sbjct: 61  MLPDCRKRLESALTDLQGMLAELEQSGQ 88


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