BLASTX nr result
ID: Aconitum21_contig00006205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00006205
(1693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 419 e-114
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 384 e-104
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 381 e-103
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 374 e-101
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 370 e-100
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 419 bits (1076), Expect = e-114
Identities = 216/563 (38%), Positives = 321/563 (57%)
Frame = +1
Query: 4 LSRIFSNITTPFLVLEDFNDISNASEKIGGLPKSFQRMQNFNSFINSNHLLDIGFSGSPF 183
L+R+ + + P+++ DFN++ + SEKIGG + F +NS L ++ SG F
Sbjct: 120 LTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQF 179
Query: 184 TWINKQGDNLIQERLDRALANTLWLDQFKNQLLSHIWIAGSDHAVLALDTNKTNNSSCYF 363
+W + D L+Q RLDR +AN W++ F +++ SDH+ L N +
Sbjct: 180 SWYGNRNDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLI---NNLVGDNWRK 236
Query: 364 PKRFTYNKSWANYQTCNNTIADTWNKTFSGTKCFQLYKKIESTRSSILSWLKTTKPNSAK 543
F Y+K W + + + + W++ + T + +KI S R I W + +KP+SA
Sbjct: 237 WAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMM-EKIASCRREISKWKRVSKPSSAV 295
Query: 544 RIEEINQKLSNLYNQINGDRNQINYLESQLFACMKEESNYWRMKSRALWLENGDNNTKFF 723
RI+E+ KL QI DR ++ L+ +L E +W+ KSR +W+ NGD NTK+F
Sbjct: 296 RIQELQFKLDAATKQIPFDRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYF 355
Query: 724 HASTQNRRQKNKISHLKDHNNNLFFDQSDLESIAINHFQXXXXXXXXXXWDIIEPCISKK 903
HA+T+NRR +N+I L D + DL +A +F+ ++
Sbjct: 356 HAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPL 415
Query: 904 VSQEDNTRLLAPLSDEEIRTVVFDTNPEKSPGPDGLNGDFYQTHWNVIGKDICEAIKDFF 1083
VS + N LLAP++ EE++ F NP K PGPDG+NG YQ W +G I E ++ FF
Sbjct: 416 VSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFF 475
Query: 1084 VSGKLLHKANYTLISLIPKISNPECLAQYRPISLTNQYYKFIAKILANRFKKVVDKIVSP 1263
SG + N T I LIPKI E + +RPISL N YK I K++ANR KK++ ++S
Sbjct: 476 RSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISE 535
Query: 1264 NQTAFLKDRLITDNILIVHELIHHIKNRKRGKEGLMSLKLDMTQAFDRIEWSYIRNMLEA 1443
Q AF+K RLI+DNILI HEL+H + + + E +++K D+++A+DR+EW ++ +
Sbjct: 536 TQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRG 595
Query: 1444 LGFANHWINLIMECISTVSYSVLVNGKVVGYIKPTRGIRQGDPLSPLLFIICAEGLSALI 1623
LGFA+HWI LIMEC+ +V Y VL+NG G I P+RG+RQGDPLSP LF+IC E L ++
Sbjct: 596 LGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKML 655
Query: 1624 NKVETGGNLKGLKIANSAPSISH 1692
E + GLK+A AP ISH
Sbjct: 656 QSAEQKNQITGLKVARGAPPISH 678
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 384 bits (985), Expect = e-104
Identities = 197/563 (34%), Positives = 322/563 (57%)
Frame = +1
Query: 4 LSRIFSNITTPFLVLEDFNDISNASEKIGGLPKSFQRMQNFNSFINSNHLLDIGFSGSPF 183
L R+ ++ + P+++ DFN+I N +EK GG +S +QNF + IN ++ D+ G+P+
Sbjct: 482 LQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPY 541
Query: 184 TWINKQGDNLIQERLDRALANTLWLDQFKNQLLSHIWIAGSDHAVLALDTNKTNNSSCYF 363
+W+ K+ + I+ LDR N+ W F + IAGSDHA + +D + C
Sbjct: 542 SWVGKRQNETIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAE---EVCTK 598
Query: 364 PKRFTYNKSWANYQTCNNTIADTWNKTFSGTKCFQLYKKIESTRSSILSWLKTTKPNSAK 543
+F Y++ ++ +++ WN+ S + Y+K+ R + W + TK N+A+
Sbjct: 599 RGQFRYDRRHFQFEDFVDSVQRGWNRGRSDSHG-GYYEKLHCCRQELAKWKRRTKTNTAE 657
Query: 544 RIEEINQKLSNLYNQINGDRNQINYLESQLFACMKEESNYWRMKSRALWLENGDNNTKFF 723
+IE + ++ I L L ++E YW +KSR W+ GD NT FF
Sbjct: 658 KIETLKYRVDAAERDHTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFF 717
Query: 724 HASTQNRRQKNKISHLKDHNNNLFFDQSDLESIAINHFQXXXXXXXXXXWDIIEPCISKK 903
+AST+ R+ +N+I + D F + +A N+F W+ I I+ K
Sbjct: 718 YASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQTSDWEEIISGIAPK 777
Query: 904 VSQEDNTRLLAPLSDEEIRTVVFDTNPEKSPGPDGLNGDFYQTHWNVIGKDICEAIKDFF 1083
V+++ N LL ++D+E+R VF +++PG DG FY W++IG D+C ++ FF
Sbjct: 778 VTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFF 837
Query: 1084 VSGKLLHKANYTLISLIPKISNPECLAQYRPISLTNQYYKFIAKILANRFKKVVDKIVSP 1263
S + ++ N T I LIPKI +P+ ++ YRPISL YK I+KIL R K+ + ++S
Sbjct: 838 ESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILIKRLKQCLGDVISD 897
Query: 1264 NQTAFLKDRLITDNILIVHELIHHIKNRKRGKEGLMSLKLDMTQAFDRIEWSYIRNMLEA 1443
+Q AF+ + I+DN+L+ HEL+H +K+R+ + G +++K D+++A+DR+EW+++ ++
Sbjct: 898 SQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQ 957
Query: 1444 LGFANHWINLIMECISTVSYSVLVNGKVVGYIKPTRGIRQGDPLSPLLFIICAEGLSALI 1623
LGFA W+ IM C+++VSY VL+NG G I P+RGIRQGDPLSP LF+ CAE LS ++
Sbjct: 958 LGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNML 1017
Query: 1624 NKVETGGNLKGLKIANSAPSISH 1692
K E + G+KI +ISH
Sbjct: 1018 RKAEVNKQIHGMKITKDCLAISH 1040
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 381 bits (978), Expect = e-103
Identities = 191/545 (35%), Positives = 310/545 (56%)
Frame = +1
Query: 58 NDISNASEKIGGLPKSFQRMQNFNSFINSNHLLDIGFSGSPFTWINKQGDNLIQERLDRA 237
N+I + SEK GG P+ +F SFI+ N L D+ +SG+PF+W + D +++RLDRA
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRYDWFVRQRLDRA 95
Query: 238 LANTLWLDQFKNQLLSHIWIAGSDHAVLALDTNKTNNSSCYFPKRFTYNKSWANYQTCNN 417
++N WL+ F + ++ GSDH L + ++ +F ++ + N
Sbjct: 96 MSNNSWLESFPSGRSEYLRFEGSDHRPLVVFVDEARVKR---RGQFRFDNRLRDNDVVNA 152
Query: 418 TIADTWNKTFSGTKCFQLYKKIESTRSSILSWLKTTKPNSAKRIEEINQKLSNLYNQING 597
I +TW + + K+ R I++W + NSA+ IE+ + L
Sbjct: 153 LIQETWTNAGDAS----VLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALTADPP 208
Query: 598 DRNQINYLESQLFACMKEESNYWRMKSRALWLENGDNNTKFFHASTQNRRQKNKISHLKD 777
+ I L + L K E +W+ +SR LWL +GD NT +FHA T+NRR +N+++ ++D
Sbjct: 209 NPTTIGALTATLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMED 268
Query: 778 HNNNLFFDQSDLESIAINHFQXXXXXXXXXXWDIIEPCISKKVSQEDNTRLLAPLSDEEI 957
N ++ + I +FQ + +++ I VSQ DN L +DEE+
Sbjct: 269 INGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEV 328
Query: 958 RTVVFDTNPEKSPGPDGLNGDFYQTHWNVIGKDICEAIKDFFVSGKLLHKANYTLISLIP 1137
+ VF N K+PGPDG FY ++W++I D+ I+ FF S + N T I LIP
Sbjct: 329 KDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIP 388
Query: 1138 KISNPECLAQYRPISLTNQYYKFIAKILANRFKKVVDKIVSPNQTAFLKDRLITDNILIV 1317
K P +A YRPI+L N +YK +AKI+ R + ++ K++S NQ+AF+ R+I+DN+LI
Sbjct: 389 KDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLIT 448
Query: 1318 HELIHHIKNRKRGKEGLMSLKLDMTQAFDRIEWSYIRNMLEALGFANHWINLIMECISTV 1497
HE++H ++ K M++K DM++A+DR+EW +++ +L+ GF + WI+ ++EC+++V
Sbjct: 449 HEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSV 508
Query: 1498 SYSVLVNGKVVGYIKPTRGIRQGDPLSPLLFIICAEGLSALINKVETGGNLKGLKIANSA 1677
SYS L+NG G + PTRG+RQGDPLSP LFI+C E LS L + + L G++++ +
Sbjct: 509 SYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSING 568
Query: 1678 PSISH 1692
P ++H
Sbjct: 569 PRVNH 573
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 374 bits (959), Expect = e-101
Identities = 206/553 (37%), Positives = 306/553 (55%), Gaps = 3/553 (0%)
Frame = +1
Query: 43 VLEDFNDISNASEKIGGLPKSFQRMQNFNSFINSNHLLDIGFSGSPFTWINKQGDNLIQE 222
++ DFNDI + EK+GG +S Q F + + + ++G +G+ FTW + D +Q
Sbjct: 132 LIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNRNDQWVQC 191
Query: 223 RLDRALANTLWLDQFKNQLLSHIWIA---GSDHAVLALDTNKTNNSSCYFPKRFTYNKSW 393
+LDR N W F N +H W GSDH + + K N + F +F Y+K
Sbjct: 192 KLDRCFGNPAWFSIFPN---AHQWFLEKFGSDHRPVLV---KFTNDNELFRGQFRYDKRL 245
Query: 394 ANYQTCNNTIADTWNKTFSGTKCFQLYKKIESTRSSILSWLKTTKPNSAKRIEEINQKLS 573
+ C I +WN S + IE R+ I W ++ N+ RI+ + + L
Sbjct: 246 DDDPYCIEVIHRSWNSAMSQGTHSSFFSLIECRRA-ISVWKHSSDTNAQSRIKRLRKDLD 304
Query: 574 NLYNQINGDRNQINYLESQLFACMKEESNYWRMKSRALWLENGDNNTKFFHASTQNRRQK 753
+ +I Y++ QL +E +WR KSR WL GD NT FFHA+ + R K
Sbjct: 305 AEKSIQIPCWPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLK 364
Query: 754 NKISHLKDHNNNLFFDQSDLESIAINHFQXXXXXXXXXXWDIIEPCISKKVSQEDNTRLL 933
N++S L D N+ F SD IA + F+ + + KV+ E N L+
Sbjct: 365 NELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLI 424
Query: 934 APLSDEEIRTVVFDTNPEKSPGPDGLNGDFYQTHWNVIGKDICEAIKDFFVSGKLLHKAN 1113
+++ E+ VF N E +PGPDG F+Q HW+++ I I FF +G L N
Sbjct: 425 QEVTELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWN 484
Query: 1114 YTLISLIPKISNPECLAQYRPISLTNQYYKFIAKILANRFKKVVDKIVSPNQTAFLKDRL 1293
+T I LIPKI++P+ ++ RPISL + YK I+KIL R KK + IVS Q+AF+ RL
Sbjct: 485 HTHICLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRL 544
Query: 1294 ITDNILIVHELIHHIKNRKRGKEGLMSLKLDMTQAFDRIEWSYIRNMLEALGFANHWINL 1473
I+DNIL+ HE+IH ++ R + M+ K DM++A+DR+EW ++ M+ ALGF N WI+
Sbjct: 545 ISDNILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISW 604
Query: 1474 IMECISTVSYSVLVNGKVVGYIKPTRGIRQGDPLSPLLFIICAEGLSALINKVETGGNLK 1653
IM C+++VSYSVL+NG+ G+I PTRGIRQGDPLSP LF++C E L ++NK E G +
Sbjct: 605 IMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKIT 664
Query: 1654 GLKIANSAPSISH 1692
G++ + S++H
Sbjct: 665 GIQFQDKKVSVNH 677
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 370 bits (950), Expect = e-100
Identities = 198/563 (35%), Positives = 315/563 (55%)
Frame = +1
Query: 4 LSRIFSNITTPFLVLEDFNDISNASEKIGGLPKSFQRMQNFNSFINSNHLLDIGFSGSPF 183
+SRI + + DFNDI + EK GG +S + FN I L+++ G+ F
Sbjct: 83 ISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGF 142
Query: 184 TWINKQGDNLIQERLDRALANTLWLDQFKNQLLSHIWIAGSDHAVLALDTNKTNNSSCYF 363
TW ++GD+ IQ RLDRA N W F + + GSDH + + + +S +
Sbjct: 143 TWAGRRGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSSQDS---Y 199
Query: 364 PKRFTYNKSWANYQTCNNTIADTWNKTFSGTKCFQLYKKIESTRSSILSWLKTTKPNSAK 543
+F ++K + + I TW++ GT + ++ + R S+ SW K NS
Sbjct: 200 RGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTN-ISVADRLRACRKSLSSWKKQNNLNSLD 258
Query: 544 RIEEINQKLSNLYNQINGDRNQINYLESQLFACMKEESNYWRMKSRALWLENGDNNTKFF 723
+I ++ L + + +++ L+ L +EE YW+ KSR WL +G+ N+K+F
Sbjct: 259 KINQLEAALEKEQSLVWPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYF 318
Query: 724 HASTQNRRQKNKISHLKDHNNNLFFDQSDLESIAINHFQXXXXXXXXXXWDIIEPCISKK 903
HA+ + RQ+ +I LKD N N+ ++ +A +F + + +
Sbjct: 319 HAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPR 378
Query: 904 VSQEDNTRLLAPLSDEEIRTVVFDTNPEKSPGPDGLNGDFYQTHWNVIGKDICEAIKDFF 1083
VS+ N L+ +S +EI+ VF P +PGPDG++ F+Q +W+ +G + +K FF
Sbjct: 379 VSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFF 438
Query: 1084 VSGKLLHKANYTLISLIPKISNPECLAQYRPISLTNQYYKFIAKILANRFKKVVDKIVSP 1263
G + + NYT + LIPK +P + RPISL + YK I+KI+A R + + +IVS
Sbjct: 439 ADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSD 498
Query: 1264 NQTAFLKDRLITDNILIVHELIHHIKNRKRGKEGLMSLKLDMTQAFDRIEWSYIRNMLEA 1443
Q+AF+ +RLITDNIL+ HEL+H +K R M++K DM++A+DR+EWSY+R++L +
Sbjct: 499 TQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLS 558
Query: 1444 LGFANHWINLIMECISTVSYSVLVNGKVVGYIKPTRGIRQGDPLSPLLFIICAEGLSALI 1623
LGF W+N IM C+S+V+YSVL+N G I RG+RQGDPLSP LF++C EGL+ L+
Sbjct: 559 LGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLL 618
Query: 1624 NKVETGGNLKGLKIANSAPSISH 1692
NK + G L+G++ + + P + H
Sbjct: 619 NKAQWEGALEGIQFSENGPMVHH 641