BLASTX nr result

ID: Aconitum21_contig00006087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00006087
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27227.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]    107   2e-21
ref|XP_002304597.1| predicted protein [Populus trichocarpa] gi|2...    87   5e-15
ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis ...    86   7e-15
ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine ...    86   1e-14

>emb|CBI27227.3| unnamed protein product [Vitis vinifera]
          Length = 773

 Score =  114 bits (285), Expect = 2e-23
 Identities = 61/118 (51%), Positives = 80/118 (67%), Gaps = 1/118 (0%)
 Frame = +3

Query: 3   LRYGAAKIQEDALKLFNSGQREFLGSFRVDTRGNQYNAWGVTALSVTATKILATP-GTCS 179
           LRYG AKIQEDAL LF +G RE+LGS +V TR NQ + W +TALSV+A+KI+A P GTCS
Sbjct: 385 LRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWSITALSVSASKIVAIPTGTCS 444

Query: 180 ILKYFHGRDLSLAPEEHIGSEVTQDALLPSHLGTETCSGGNMIELPKESSHEEAKSGF 353
           I+KYFHG+DLS +  +      T++A   SH G+E+  G N  E  K+   EE +  +
Sbjct: 445 IMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSGSESYLGLNPRETQKQFPGEETRINY 502


>ref|XP_002275643.2| PREDICTED: DNA polymerase eta [Vitis vinifera]
          Length = 779

 Score =  107 bits (268), Expect = 2e-21
 Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 7/124 (5%)
 Frame = +3

Query: 3   LRYGAAKIQEDALKLFNSGQREFLGSFRVDTRGNQYNAWGVTALSVTATKILATP-GTCS 179
           LRYG AKIQEDAL LF +G RE+LGS +V TR NQ + W +TALSV+A+KI+A P GTCS
Sbjct: 385 LRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWSITALSVSASKIVAIPTGTCS 444

Query: 180 ILKYFHGRDLSLAPEEHIGSEVTQDALLPSH------LGTETCSGGNMIELPKESSHEEA 341
           I+KYFHG+DLS +  +      T++A   SH       G+E+  G N  E  K+   EE 
Sbjct: 445 IMKYFHGQDLSSSSLKQPQDRSTEEAASLSHSDWGVYSGSESYLGLNPRETQKQFPGEET 504

Query: 342 KSGF 353
           +  +
Sbjct: 505 RINY 508


>ref|XP_002304597.1| predicted protein [Populus trichocarpa] gi|222842029|gb|EEE79576.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 42/68 (61%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   LRYGAAKIQEDALKLFNSGQREFLGSFRVDTRGNQYNAWGVTALSVTATKILATP-GTCS 179
           LRYG AKIQEDA  LF +G RE++GS  V T G+ +N WG+T+LSV+A+KI+A P GT S
Sbjct: 285 LRYGTAKIQEDAFNLFQAGLREYIGSHGVKTLGHHHNGWGITSLSVSASKIVAIPSGTGS 344

Query: 180 ILKYFHGR 203
           I KYFHG+
Sbjct: 345 ITKYFHGQ 352


>ref|XP_004170496.1| PREDICTED: DNA polymerase eta-like [Cucumis sativus]
          Length = 557

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
 Frame = +3

Query: 3   LRYGAAKIQEDALKLFNSGQREFLGSFRVDTRGNQYNAWGVTALSVTATKILATP-GTCS 179
           LRYGAAKIQEDAL LF +G R++LGS+R +  G+  N W +T+LSV+A+KI+  P G CS
Sbjct: 386 LRYGAAKIQEDALNLFKAGLRDYLGSYRANILGDSNNGWRITSLSVSASKIMTIPSGMCS 445

Query: 180 ILKYFHGRDLSLAPEEHIGSEVTQDALLPSHLGTETCSGGNMIELPKESSHEEAK 344
           I KY H +  S    E       Q+  L  H G    S  +  E   E + EE K
Sbjct: 446 ITKYLHVQHSSCTSSEQPQDNDIQETAL--HSGCTNYSVMDSNEAHDERTGEEMK 498


>ref|XP_003532665.1| PREDICTED: DNA polymerase eta-like [Glycine max]
          Length = 703

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 5/120 (4%)
 Frame = +3

Query: 3   LRYGAAKIQEDALKLFNSGQREFLGSFRVDTRGNQYNAWGVTALSVTATKILATP-GTCS 179
           LRYG  KIQEDAL LF +G R+FLG +     GN+ N WGVT+LSV+A+K+++ P GT S
Sbjct: 386 LRYGTRKIQEDALILFQAGLRDFLGFYNCKAHGNENNNWGVTSLSVSASKLVSIPSGTHS 445

Query: 180 ILKYFHGRDLSLAPEEHIGSEVTQDALLPSHLGTETCSG--GNMIEL--PKESSHEEAKS 347
           I+KYF G   S +        V  +A   S  G+  CSG   N  EL  P+++  +++K+
Sbjct: 446 IVKYFGGSFPSSSTSNQSLDVVIDEAAPSSPSGSGNCSGLVPNEFELEYPEDTGMKDSKA 505


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