BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00005949
         (1005 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39565.3| unnamed protein product [Vitis vinifera]              279   7e-73
ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like...   279   7e-73
emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]   276   6e-72
ref|XP_004135590.1| PREDICTED: DNA polymerase III PolC-type-like...   265   1e-68
ref|XP_004165902.1| PREDICTED: DNA polymerase III PolC-type-like...   264   3e-68

>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score =  279 bits (714), Expect = 7e-73
 Identities = 138/253 (54%), Positives = 198/253 (78%), Gaps = 1/253 (0%)
 Frame = -3

Query: 967 SSKPRIVRPDELLDEVIATSSGIHINEAKASVSEGMEHHDVQQKVV-NRNIQQLLTILLF 791
           SSK   +R  E++D  ++TS+ + +++ + S S+ +++ +VQ+KV  N+++ +L+T+++F
Sbjct: 73  SSKRSNIR-HEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTVIVF 131

Query: 790 DTETTGFSRKSERIVEIAFRDLSGGVNSTFQTLINPDCYVPNHHIHGISTHMVDRPEVPR 611
           DTETTG SR ++RI+EI  +DL GG NSTFQTL+NP+  VPN H+HGI+T+MV+RP+VPR
Sbjct: 132 DTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPR 191

Query: 610 FKELIPILLHYIESRRIPDTPILLVAHNARSFDVPFLINEFSRCSVDIPSHFRFLDTMSI 431
           +K+LIPILL Y+ESR+ P   IL VAHN RSFDVPFLINEFSRC+ ++P ++RFLDT+ +
Sbjct: 192 WKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLPL 251

Query: 430 AREKAKLEATKNLAGVSLQALREYYGIPLVGTAHNAMSDVHTLAMVLKEMTHDLKLTPLD 251
           ARE  K   +    G SLQALREYY IPLVG AH  +SDV+TL+ VL+ +T +LK++  +
Sbjct: 252 ARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVAN 311

Query: 250 LLERSFTASDVVN 212
           LL+RSFTASD++N
Sbjct: 312 LLDRSFTASDIIN 324


>ref|XP_002282861.1| PREDICTED: DNA polymerase III polC-type-like isoform 2 [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           DNA polymerase III polC-type-like isoform 1 [Vitis
           vinifera]
          Length = 337

 Score =  279 bits (714), Expect = 7e-73
 Identities = 138/253 (54%), Positives = 198/253 (78%), Gaps = 1/253 (0%)
 Frame = -3

Query: 967 SSKPRIVRPDELLDEVIATSSGIHINEAKASVSEGMEHHDVQQKVV-NRNIQQLLTILLF 791
           SSK   +R  E++D  ++TS+ + +++ + S S+ +++ +VQ+KV  N+++ +L+T+++F
Sbjct: 78  SSKRSNIR-HEIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTVIVF 136

Query: 790 DTETTGFSRKSERIVEIAFRDLSGGVNSTFQTLINPDCYVPNHHIHGISTHMVDRPEVPR 611
           DTETTG SR ++RI+EI  +DL GG NSTFQTL+NP+  VPN H+HGI+T+MV+RP+VPR
Sbjct: 137 DTETTGLSRANDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPR 196

Query: 610 FKELIPILLHYIESRRIPDTPILLVAHNARSFDVPFLINEFSRCSVDIPSHFRFLDTMSI 431
           +K+LIPILL Y+ESR+ P   IL VAHN RSFDVPFLINEFSRC+ ++P ++RFLDT+ +
Sbjct: 197 WKDLIPILLQYVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFLDTLPL 256

Query: 430 AREKAKLEATKNLAGVSLQALREYYGIPLVGTAHNAMSDVHTLAMVLKEMTHDLKLTPLD 251
           ARE  K   +    G SLQALREYY IPLVG AH  +SDV+TL+ VL+ +T +LK++  +
Sbjct: 257 ARELIKSAGSDLPPGASLQALREYYRIPLVGPAHRVLSDVYTLSQVLQMLTFNLKVSVAN 316

Query: 250 LLERSFTASDVVN 212
           LL+RSFTASD++N
Sbjct: 317 LLDRSFTASDIIN 329


>emb|CAN74413.1| hypothetical protein VITISV_042394 [Vitis vinifera]
          Length = 340

 Score =  276 bits (706), Expect = 6e-72
 Identities = 131/243 (53%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
 Frame = -3

Query: 937 ELLDEVIATSSGIHINEAKASVSEGMEHHDVQQKVV-NRNIQQLLTILLFDTETTGFSRK 761
           E++D  ++TS+ + +++ + S S+ +++ +VQ+KV  N+++ +L+T+++FDTETTG SR 
Sbjct: 90  EIVDGTVSTSTKLIVDKLEISESQRIQYCEVQEKVTENKDLAKLVTVIVFDTETTGLSRA 149

Query: 760 SERIVEIAFRDLSGGVNSTFQTLINPDCYVPNHHIHGISTHMVDRPEVPRFKELIPILLH 581
           ++RI+EI  +DL GG NSTFQTL+NP+  VPN H+HGI+T+MV+RP+VPR+K+LIPILL 
Sbjct: 150 NDRIIEIGLQDLGGGENSTFQTLVNPERIVPNPHVHGITTYMVNRPDVPRWKDLIPILLQ 209

Query: 580 YIESRRIPDTPILLVAHNARSFDVPFLINEFSRCSVDIPSHFRFLDTMSIAREKAKLEAT 401
           Y+ESR+ P   IL VAHN RSFDVPFLINEFSRC+ ++P ++RF+DT+ +ARE  K   +
Sbjct: 210 YVESRQKPGGLILWVAHNGRSFDVPFLINEFSRCNTEVPPNWRFMDTLPLAREFIKSAGS 269

Query: 400 KNLAGVSLQALREYYGIPLVGTAHNAMSDVHTLAMVLKEMTHDLKLTPLDLLERSFTASD 221
              +G SLQALREY+ IPLVG AH  +SDV+TL+ +L+ +T +LK++  +LL+RSFTASD
Sbjct: 270 DLPSGASLQALREYFRIPLVGPAHRVLSDVYTLSQILQMLTFNLKVSVANLLDRSFTASD 329

Query: 220 VVN 212
           ++N
Sbjct: 330 IIN 332


>ref|XP_004135590.1| PREDICTED: DNA polymerase III PolC-type-like [Cucumis sativus]
          Length = 327

 Score =  265 bits (678), Expect = 1e-68
 Identities = 138/265 (52%), Positives = 193/265 (72%), Gaps = 1/265 (0%)
 Frame = -3

Query: 1003 TTEEYVTENTLLSSKPRIVRPDELLDEVIATSSGIHINEAKASVSEGMEHHDVQQKVV-N 827
            TT+      T  SSKP  +R +E+L E +  S  ++IN+++ S ++ +++ D+Q  ++ +
Sbjct: 61   TTKAGEKAKTNPSSKPTNIR-NEILQESMLASCTVNINKSEKSETQKLQYCDIQPTIIKS 119

Query: 826  RNIQQLLTILLFDTETTGFSRKSERIVEIAFRDLSGGVNSTFQTLINPDCYVPNHHIHGI 647
            +    L+T++ FD ETTGFSR  +RIVEIAF+DLSGG NSTFQTLINP CY+ N +IHGI
Sbjct: 120  KEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGI 179

Query: 646  STHMVDRPEVPRFKELIPILLHYIESRRIPDTPILLVAHNARSFDVPFLINEFSRCSVDI 467
            S  MVD P VPR +ELIPI+L +++SR+ P   +LLVAHNAR+FDVPFL++EFSR SVDI
Sbjct: 180  SNRMVDSPSVPRMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDI 239

Query: 466  PSHFRFLDTMSIAREKAKLEATKNLAGVSLQALREYYGIPLVGTAHNAMSDVHTLAMVLK 287
            P ++ F DTM++AR+  KL  +K +  ++LQAL EYYGI L G AH A+SDV  L+ +L+
Sbjct: 240  PLNWLFFDTMTLARQLMKLSDSK-ITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ 298

Query: 286  EMTHDLKLTPLDLLERSFTASDVVN 212
             +T DLKL   DL+ER+FT  D++N
Sbjct: 299  RLTFDLKLDISDLVERAFTPLDLIN 323


>ref|XP_004165902.1| PREDICTED: DNA polymerase III PolC-type-like [Cucumis sativus]
          Length = 334

 Score =  264 bits (674), Expect = 3e-68
 Identities = 137/265 (51%), Positives = 192/265 (72%), Gaps = 1/265 (0%)
 Frame = -3

Query: 1003 TTEEYVTENTLLSSKPRIVRPDELLDEVIATSSGIHINEAKASVSEGMEHHDVQQKVV-N 827
            TT+      T  SSKP  +R +E+L E +  S  ++IN+++ S ++ +++ D+Q  ++ +
Sbjct: 61   TTKAGEKAKTNPSSKPTNIR-NEILQESVLASCTVNINKSEKSETQKLQYCDIQPTIIKS 119

Query: 826  RNIQQLLTILLFDTETTGFSRKSERIVEIAFRDLSGGVNSTFQTLINPDCYVPNHHIHGI 647
            +    L+T++ FD ETTGFSR  +RIVEIAF+DLSGG NSTFQTLINP CY+ N +IHGI
Sbjct: 120  KEFAHLVTVITFDIETTGFSRNLDRIVEIAFQDLSGGENSTFQTLINPQCYITNSNIHGI 179

Query: 646  STHMVDRPEVPRFKELIPILLHYIESRRIPDTPILLVAHNARSFDVPFLINEFSRCSVDI 467
            S  MVD P VP  +ELIPI+L +++SR+ P   +LLVAHNAR+FDVPFL++EFSR SVDI
Sbjct: 180  SNRMVDSPSVPSMQELIPIILQFVKSRQKPGGYVLLVAHNARTFDVPFLLSEFSRYSVDI 239

Query: 466  PSHFRFLDTMSIAREKAKLEATKNLAGVSLQALREYYGIPLVGTAHNAMSDVHTLAMVLK 287
            P ++ F DTM++AR+  KL  +K +  ++LQAL EYYGI L G AH A+SDV  L+ +L+
Sbjct: 240  PLNWLFFDTMTLARQLMKLSDSK-ITKITLQALGEYYGIKLDGKAHRALSDVRLLSSILQ 298

Query: 286  EMTHDLKLTPLDLLERSFTASDVVN 212
             +T DLKL   DL+ER+FT  D++N
Sbjct: 299  RLTFDLKLDISDLVERAFTPLDLIN 323