BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00005884
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   602   e-170
ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chlor...   583   e-164
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   579   e-163
ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chlor...   577   e-162
ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis vinifera]
            gi|302144082|emb|CBI23187.3| unnamed protein product
            [Vitis vinifera]
          Length = 472

 Score =  602 bits (1552), Expect = e-170
 Identities = 274/339 (80%), Positives = 317/339 (93%)
 Frame = -2

Query: 1200 SLVCPKPPPTATPDQIRLFQEVTSPSVLSKRPSLKGKTVREAQKTFRITHVHEFVEAGTY 1021
            +LVCP+PPP+ATP+Q+RLF+EVT+PSVL KRPS+KGKT+REAQKTFRIT V+EFVEAGTY
Sbjct: 133  ALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTY 192

Query: 1020 IRVHVHPKRFPRCYEIDWKSRIIAVDESYVVLDKPAGTSVGGTTDNIEETCATFATRALG 841
            +RVHVHPKRFPRCYEIDWKSRIIAV ESYVVLDKPAGTSVGGTTDNIEE+CATFATRALG
Sbjct: 193  LRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 252

Query: 840  LESPLMTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKRVKKLYRALAAAPLQLGIITHY 661
            L +PL TTHQIDNC+EGCVVLARTKEYCSVFHGKIREK+VKKLYRALAAAP+ +GI+THY
Sbjct: 253  LTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHY 312

Query: 660  MRPLNIAPRLVSKDFHRGWHLCQLEVLECREVPWPNAIVQEKYCIDDCGWPSKDAAYECK 481
            MRP+NIAPRL+S+DF +GW+LCQLEVLEC+EVPWP+ +++EKYCI+D GWP K++A++CK
Sbjct: 313  MRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIEDRGWPLKNSAFKCK 372

Query: 480  INLLTGRTHQIRAQFAACGAPIVGDAMYMPAVLAEKSNPGLNPFGEHGKLYPTEEDKANA 301
            INLLTGRTHQIRAQ AACGAPIVGD+MYMPA +AE ++PGLNPFG++ K Y TE D+  A
Sbjct: 373  INLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKYKKKYTTENDRETA 432

Query: 300  VKEWMAQHGKEPSVAIGLQAFQISWDEGEHFYEAGSPWW 184
            V EW+AQHGKEP VAIGLQA QISWD+GEHFY+AGSPWW
Sbjct: 433  VAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471


>ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
            max]
          Length = 473

 Score =  583 bits (1502), Expect = e-164
 Identities = 265/340 (77%), Positives = 307/340 (90%)
 Frame = -2

Query: 1200 SLVCPKPPPTATPDQIRLFQEVTSPSVLSKRPSLKGKTVREAQKTFRITHVHEFVEAGTY 1021
            +LVCP+PPP AT +QIR+F+EVT PSVL KR S+KGKTVREAQKTFR+THV +FVE GTY
Sbjct: 133  ALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTY 192

Query: 1020 IRVHVHPKRFPRCYEIDWKSRIIAVDESYVVLDKPAGTSVGGTTDNIEETCATFATRALG 841
            +RVHVHPKRFPR YEIDW+SRIIAV ESYVVLDKPAGTSVGGTTDNIEE+CATFATRALG
Sbjct: 193  LRVHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 252

Query: 840  LESPLMTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKRVKKLYRALAAAPLQLGIITHY 661
            + +PLMTTHQIDNC+EGCVVLARTK+YCS+FHGKIREK+VKKLY ALAA+PL  GIITHY
Sbjct: 253  MTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHY 312

Query: 660  MRPLNIAPRLVSKDFHRGWHLCQLEVLECREVPWPNAIVQEKYCIDDCGWPSKDAAYECK 481
            MRP+N+APRL+S+DF +GWHLCQLEVLECR++PWP   +Q+KYC++DCGWPS+D AYECK
Sbjct: 313  MRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTTAIQDKYCVEDCGWPSQDYAYECK 372

Query: 480  INLLTGRTHQIRAQFAACGAPIVGDAMYMPAVLAEKSNPGLNPFGEHGKLYPTEEDKANA 301
            INLLTG+THQIRAQFAA  AP++GD+MYMPA +A+ SNPGLNPFG++ K + +E +K  A
Sbjct: 373  INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVSNPGLNPFGKYKKDFSSESEKETA 432

Query: 300  VKEWMAQHGKEPSVAIGLQAFQISWDEGEHFYEAGSPWWR 181
            V  WMAQHGKEPSVAIGLQA QISWD+ EHFYEAG PWWR
Sbjct: 433  VVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLPWWR 472


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 476

 Score =  579 bits (1493), Expect = e-163
 Identities = 264/340 (77%), Positives = 308/340 (90%)
 Frame = -2

Query: 1200 SLVCPKPPPTATPDQIRLFQEVTSPSVLSKRPSLKGKTVREAQKTFRITHVHEFVEAGTY 1021
            +LVCP+PP TATP+QIRLF++ T+PSVL KR S+KGKTVREAQKTFRITHV +++EAGTY
Sbjct: 133  ALVCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTY 192

Query: 1020 IRVHVHPKRFPRCYEIDWKSRIIAVDESYVVLDKPAGTSVGGTTDNIEETCATFATRALG 841
            +RVHVHPKRFPRCY+IDWKSRIIAV + YVVLDKPAGTSVGGT DNIEE+CATFATRALG
Sbjct: 193  LRVHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALG 252

Query: 840  LESPLMTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKRVKKLYRALAAAPLQLGIITHY 661
            L +PL TTHQIDNC+EGCVVLAR+KEYCSVFHGKIREK+VKKLY ALAA+P+ +G+I +Y
Sbjct: 253  LTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNY 312

Query: 660  MRPLNIAPRLVSKDFHRGWHLCQLEVLECREVPWPNAIVQEKYCIDDCGWPSKDAAYECK 481
            MRP+NIAPRL+S++F  GWHLCQLEVLECR+VPWP+A ++EKY ++DCGWPSKD AYECK
Sbjct: 313  MRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDAAIEEKYSVEDCGWPSKDFAYECK 372

Query: 480  INLLTGRTHQIRAQFAACGAPIVGDAMYMPAVLAEKSNPGLNPFGEHGKLYPTEEDKANA 301
            INLLTGRTHQIRAQ AA GAP+VGD+MYMPA +AE +NPGLNPFG+H K Y  E D++ A
Sbjct: 373  INLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMANPGLNPFGKHRKQYTNESDESMA 432

Query: 300  VKEWMAQHGKEPSVAIGLQAFQISWDEGEHFYEAGSPWWR 181
            V EW+AQHGKEP VAIGLQA +ISWDEG+H Y+AGSPWWR
Sbjct: 433  VAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSPWWR 472


>ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
            max]
          Length = 473

 Score =  577 bits (1487), Expect = e-162
 Identities = 265/340 (77%), Positives = 303/340 (89%)
 Frame = -2

Query: 1200 SLVCPKPPPTATPDQIRLFQEVTSPSVLSKRPSLKGKTVREAQKTFRITHVHEFVEAGTY 1021
            +LVCP+PPP AT +QIR+F+EVT PSVL KR S+KGKTVREAQKTFR+THV +FVE GTY
Sbjct: 133  ALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTY 192

Query: 1020 IRVHVHPKRFPRCYEIDWKSRIIAVDESYVVLDKPAGTSVGGTTDNIEETCATFATRALG 841
            +RVHVHPKR PRCYEIDW+SRII V ESYVVLDKPAGTSVGGTTDNIEE+CATFATRALG
Sbjct: 193  LRVHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALG 252

Query: 840  LESPLMTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKRVKKLYRALAAAPLQLGIITHY 661
            + +PLMTTHQIDNC+EGCVVLARTKEYCSVFHGKIREK+VKK Y ALAA PL  GIITHY
Sbjct: 253  MTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHY 312

Query: 660  MRPLNIAPRLVSKDFHRGWHLCQLEVLECREVPWPNAIVQEKYCIDDCGWPSKDAAYECK 481
            MRP+++APRL+S+DF +GWHLCQLEVLECR+VPWP   +Q+KYCI+DCGWPS+D AYECK
Sbjct: 313  MRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPATAIQDKYCIEDCGWPSQDYAYECK 372

Query: 480  INLLTGRTHQIRAQFAACGAPIVGDAMYMPAVLAEKSNPGLNPFGEHGKLYPTEEDKANA 301
            INLLTG+THQIRAQFAA  AP++GD+MYMPA +A  SNPGLNPFG++ K + +E +K  A
Sbjct: 373  INLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMSNPGLNPFGKYKKDFSSESEKETA 432

Query: 300  VKEWMAQHGKEPSVAIGLQAFQISWDEGEHFYEAGSPWWR 181
            V  W+AQHGKEPSVAIGLQA QISWD+ EHFYEA SPWWR
Sbjct: 433  VVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSPWWR 472


>ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|222847890|gb|EEE85437.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  573 bits (1478), Expect = e-161
 Identities = 261/340 (76%), Positives = 307/340 (90%)
 Frame = -2

Query: 1200 SLVCPKPPPTATPDQIRLFQEVTSPSVLSKRPSLKGKTVREAQKTFRITHVHEFVEAGTY 1021
            +LVCP+PP TATP+QIR+F+EVT+PSVL KR S+KGKTVREAQKTFRITHV +F+EAG Y
Sbjct: 127  ALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMY 186

Query: 1020 IRVHVHPKRFPRCYEIDWKSRIIAVDESYVVLDKPAGTSVGGTTDNIEETCATFATRALG 841
            +RVHVHPKRFPRCY+IDWKSRII V ES+VVLDKPAGTSVGGTTDNIEE+CATFATRALG
Sbjct: 187  LRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALG 246

Query: 840  LESPLMTTHQIDNCSEGCVVLARTKEYCSVFHGKIREKRVKKLYRALAAAPLQLGIITHY 661
            L +PL TTHQIDNC+EGCVVLART+E CSVFHGKIREK VKKLY ALAA+P+ +G++ HY
Sbjct: 247  LTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHY 306

Query: 660  MRPLNIAPRLVSKDFHRGWHLCQLEVLECREVPWPNAIVQEKYCIDDCGWPSKDAAYECK 481
            MRP+N+APRLVS++F +GWHLCQLEV+EC+ VPWP+A+++EKYC+ DCGWPSKD AYECK
Sbjct: 307  MRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQDCGWPSKDHAYECK 366

Query: 480  INLLTGRTHQIRAQFAACGAPIVGDAMYMPAVLAEKSNPGLNPFGEHGKLYPTEEDKANA 301
            INLLTGRTHQIRAQ AA GAP+VGD+MYMPA +AE  +PG NPFG++ K Y +E+DKA A
Sbjct: 367  INLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKYKKQYTSEDDKAIA 426

Query: 300  VKEWMAQHGKEPSVAIGLQAFQISWDEGEHFYEAGSPWWR 181
            V+EW+  HGKEP+VAIGLQA QISWD+G+H Y AGSPWWR
Sbjct: 427  VEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466