BLASTX nr result

ID: Aconitum21_contig00005860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00005860
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   308   e-107
ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-bin...   283   2e-97
emb|CBI17917.3| unnamed protein product [Vitis vinifera]              266   2e-94
ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g...   277   2e-93
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   273   8e-93

>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
            vinifera]
          Length = 466

 Score =  308 bits (790), Expect(2) = e-107
 Identities = 171/269 (63%), Positives = 202/269 (75%), Gaps = 4/269 (1%)
 Frame = -3

Query: 1101 SEQIVEES-DALDTSPVEA---SPASEKKWAGWPGDNVYRLIVPVVKVXXXXXXXXXXXX 934
            SEQ   E+ ++  T+P E    +PASEKKW GWPGD V+RLIVPV+KV            
Sbjct: 42   SEQAPSENLESESTAPPETEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIK 101

Query: 933  XXXXETKARIRILDGVPGTTDRIVLISGKEEPEARLSPAMNAVIRVFKRINGLSENEDEX 754
                ET+ARIR+LDG  GT+DRIVLISG+EEPEA LSPAM+AVIRVFKR+ GLSE+E + 
Sbjct: 102  KMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDG 161

Query: 753  XXXXXXXXXXXXARLLVASSQAINLIGKQGSLIKSIQESTTASVRVLSGDEVPFYATSEE 574
                         RLLVAS+QAINLIGKQGSLIKSIQEST ASVRVLSGDEVPFYA ++E
Sbjct: 162  KAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADE 221

Query: 573  RVVDIQGESLNVLKALEAVVGHLRKFLVDHSIIPLFEKVGNTTQNNATVSQDHAVETWAD 394
            R+V++QGE+L V KALEAVVGHLRKFLVDHS++PLFE+       NAT+SQD   +TWAD
Sbjct: 222  RIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERT-----YNATISQDRQSDTWAD 276

Query: 393  KSLSFIHTSSQTGIGSDYSLSMKRDSLYL 307
            KSL  +H +SQTG+GSDYSL  KR+SLYL
Sbjct: 277  KSL--LHGTSQTGMGSDYSLPAKRESLYL 303



 Score =  107 bits (267), Expect(2) = e-107
 Identities = 57/81 (70%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 GQDPALSGLRSSVLTRGSAPVITQMTQTMQIPLSYAEDXXXXXXXXXXXIRRTSGAILTV 66
           GQ+  LSG+RSS L R  AP++TQ+ QTMQIPLSYAED           IRRTSGAILTV
Sbjct: 318 GQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTV 377

Query: 65  QESRGLPDEITVELKGTSSQV 3
           QESRGLPDEITVE+KGTSSQV
Sbjct: 378 QESRGLPDEITVEIKGTSSQV 398


>ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
            [Cucumis sativus]
          Length = 468

 Score =  283 bits (724), Expect(2) = 2e-97
 Identities = 161/261 (61%), Positives = 189/261 (72%)
 Frame = -3

Query: 1089 VEESDALDTSPVEASPASEKKWAGWPGDNVYRLIVPVVKVXXXXXXXXXXXXXXXXETKA 910
            V  SD+    P   +  S+KKW GWPGD V+RLIVPVVKV                ET+A
Sbjct: 53   VPPSDSAAHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRA 112

Query: 909  RIRILDGVPGTTDRIVLISGKEEPEARLSPAMNAVIRVFKRINGLSENEDEXXXXXXXXX 730
            RIR+LDG  GT DR+VLISGKEE E+ LSPAM+AVIRVFKR++GLSENEDE         
Sbjct: 113  RIRVLDGAVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSI- 171

Query: 729  XXXXARLLVASSQAINLIGKQGSLIKSIQESTTASVRVLSGDEVPFYATSEERVVDIQGE 550
                 RLLVAS+QAINLIGKQGSLIKSIQEST ASVRVLSGDE+PFYA ++ER+V++QGE
Sbjct: 172  -----RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGE 226

Query: 549  SLNVLKALEAVVGHLRKFLVDHSIIPLFEKVGNTTQNNATVSQDHAVETWADKSLSFIHT 370
            SL VLKALE VVGHLRKFLVDHS++PLFEK  NT       SQD   ETWADK  S + T
Sbjct: 227  SLKVLKALEGVVGHLRKFLVDHSVLPLFEKSFNT-----PASQDRQTETWADK--SSLLT 279

Query: 369  SSQTGIGSDYSLSMKRDSLYL 307
            +SQ+ I ++Y+ S KR+SL+L
Sbjct: 280  ASQSIISAEYAPSTKRESLFL 300



 Score =  100 bits (250), Expect(2) = 2e-97
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -1

Query: 245 GQDPALSGLRSSVLTRGSAPVITQMTQTMQIPLSYAEDXXXXXXXXXXXIRRTSGAILTV 66
           GQD  L  +RSS + R   P++TQ+TQTMQIPLSYAED           IRR SGAILT+
Sbjct: 319 GQDRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDIIGVGGTNIAFIRRNSGAILTI 378

Query: 65  QESRGLPDEITVELKGTSSQV 3
           QESRGLPDEITVE+KGTSSQV
Sbjct: 379 QESRGLPDEITVEIKGTSSQV 399


>emb|CBI17917.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  266 bits (681), Expect(2) = 2e-94
 Identities = 142/204 (69%), Positives = 166/204 (81%)
 Frame = -3

Query: 918 TKARIRILDGVPGTTDRIVLISGKEEPEARLSPAMNAVIRVFKRINGLSENEDEXXXXXX 739
           T+ARIR+LDG  GT+DRIVLISG+EEPEA LSPAM+AVIRVFKR+ GLSE+E +      
Sbjct: 5   TRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGA 64

Query: 738 XXXXXXXARLLVASSQAINLIGKQGSLIKSIQESTTASVRVLSGDEVPFYATSEERVVDI 559
                   RLLVAS+QAINLIGKQGSLIKSIQEST ASVRVLSGDEVPFYA ++ER+V++
Sbjct: 65  AGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVEL 124

Query: 558 QGESLNVLKALEAVVGHLRKFLVDHSIIPLFEKVGNTTQNNATVSQDHAVETWADKSLSF 379
           QGE+L V KALEAVVGHLRKFLVDHS++PLFE+       NAT+SQD   +TWADKSL  
Sbjct: 125 QGEALKVQKALEAVVGHLRKFLVDHSVLPLFERT-----YNATISQDRQSDTWADKSL-- 177

Query: 378 IHTSSQTGIGSDYSLSMKRDSLYL 307
           +H +SQTG+GSDYSL  KR+SLYL
Sbjct: 178 LHGTSQTGMGSDYSLPAKRESLYL 201



 Score =  107 bits (267), Expect(2) = 2e-94
 Identities = 57/81 (70%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 GQDPALSGLRSSVLTRGSAPVITQMTQTMQIPLSYAEDXXXXXXXXXXXIRRTSGAILTV 66
           GQ+  LSG+RSS L R  AP++TQ+ QTMQIPLSYAED           IRRTSGAILTV
Sbjct: 216 GQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTV 275

Query: 65  QESRGLPDEITVELKGTSSQV 3
           QESRGLPDEITVE+KGTSSQV
Sbjct: 276 QESRGLPDEITVEIKGTSSQV 296


>ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 443

 Score =  277 bits (708), Expect(2) = 2e-93
 Identities = 157/257 (61%), Positives = 185/257 (71%)
 Frame = -3

Query: 1083 ESDALDTSPVEASPASEKKWAGWPGDNVYRLIVPVVKVXXXXXXXXXXXXXXXXETKARI 904
            E+DA  T    AS   EK+W GWPGD V+RLIVPV KV                ET++RI
Sbjct: 31   EADAAAT----ASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRI 86

Query: 903  RILDGVPGTTDRIVLISGKEEPEARLSPAMNAVIRVFKRINGLSENEDEXXXXXXXXXXX 724
            R+LD   GT DRIVL+SGKE+PEA LSPAM+AV+R+FKR++G SE + E           
Sbjct: 87   RVLDAPLGTPDRIVLVSGKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFS 146

Query: 723  XXARLLVASSQAINLIGKQGSLIKSIQESTTASVRVLSGDEVPFYATSEERVVDIQGESL 544
               RLLVAS+QAINLIGKQGSLIKSIQE+T+ASVRVLSGDEV FYAT+ ER+V+IQGE+L
Sbjct: 147  SI-RLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEAL 205

Query: 543  NVLKALEAVVGHLRKFLVDHSIIPLFEKVGNTTQNNATVSQDHAVETWADKSLSFIHTSS 364
             VLKALEAVVGHLRKFLVDHS++PLFEK       NA  SQD   ETW+DKSL  +HTSS
Sbjct: 206  KVLKALEAVVGHLRKFLVDHSVLPLFEKT-----YNAPTSQDRQAETWSDKSL--LHTSS 258

Query: 363  QTGIGSDYSLSMKRDSL 313
            +T I +D  LS KRDS+
Sbjct: 259  RTSIFADIPLSTKRDSV 275



 Score = 93.6 bits (231), Expect(2) = 2e-93
 Identities = 52/81 (64%), Positives = 60/81 (74%)
 Frame = -1

Query: 245 GQDPALSGLRSSVLTRGSAPVITQMTQTMQIPLSYAEDXXXXXXXXXXXIRRTSGAILTV 66
           GQD +LSG+ SS L R  AP++T + QTMQIPLSYAED           IRRTSGAILTV
Sbjct: 296 GQDSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTV 355

Query: 65  QESRGLPDEITVELKGTSSQV 3
           QESR +PDEI VE+KGTSS+V
Sbjct: 356 QESR-VPDEIVVEIKGTSSEV 375


>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  273 bits (697), Expect(2) = 8e-93
 Identities = 152/246 (61%), Positives = 180/246 (73%)
 Frame = -3

Query: 1050 ASPASEKKWAGWPGDNVYRLIVPVVKVXXXXXXXXXXXXXXXXETKARIRILDGVPGTTD 871
            AS   EK+W GWPGD V+RLIVPV KV                ET++RIR+LD   GT D
Sbjct: 37   ASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPD 96

Query: 870  RIVLISGKEEPEARLSPAMNAVIRVFKRINGLSENEDEXXXXXXXXXXXXXARLLVASSQ 691
            RIVL+SGKEEPEA LSPAM+AV+R+FKR++GLSE + E              RLLVAS+Q
Sbjct: 97   RIVLVSGKEEPEAALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSI-RLLVASTQ 155

Query: 690  AINLIGKQGSLIKSIQESTTASVRVLSGDEVPFYATSEERVVDIQGESLNVLKALEAVVG 511
            AINLIGKQGSLIKSIQE+T+ASVRVLSGDEV  YAT +ER+V+IQGE+L VLKALEAVVG
Sbjct: 156  AINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVG 215

Query: 510  HLRKFLVDHSIIPLFEKVGNTTQNNATVSQDHAVETWADKSLSFIHTSSQTGIGSDYSLS 331
            HLRKFLVDHS++PLFEK       NA+ SQD   ETW+DKSL  +HT+S+T I +D   S
Sbjct: 216  HLRKFLVDHSVLPLFEKT-----YNASTSQDRQAETWSDKSL--LHTTSRTSIFADIPYS 268

Query: 330  MKRDSL 313
             KRDS+
Sbjct: 269  TKRDSV 274



 Score = 95.5 bits (236), Expect(2) = 8e-93
 Identities = 53/81 (65%), Positives = 61/81 (75%)
 Frame = -1

Query: 245 GQDPALSGLRSSVLTRGSAPVITQMTQTMQIPLSYAEDXXXXXXXXXXXIRRTSGAILTV 66
           GQD +LSG+RSS L R  AP++T + QTMQIPLSYAED           IRRTSGAILTV
Sbjct: 295 GQDSSLSGVRSSALGRVGAPIVTTVIQTMQIPLSYAEDIIGIQGTNIEYIRRTSGAILTV 354

Query: 65  QESRGLPDEITVELKGTSSQV 3
           QESR +PDEI VE+KGTSS+V
Sbjct: 355 QESR-VPDEIVVEIKGTSSEV 374


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