BLASTX nr result
ID: Aconitum21_contig00005559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00005559
(3412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containi... 755 0.0
ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|2... 718 0.0
ref|XP_002525184.1| pentatricopeptide repeat-containing protein,... 711 0.0
ref|NP_187576.1| pentatricopeptide repeat-containing protein [Ar... 709 0.0
dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana] 709 0.0
>ref|XP_002273172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09650,
chloroplastic-like [Vitis vinifera]
Length = 749
Score = 755 bits (1949), Expect = 0.0
Identities = 376/484 (77%), Positives = 425/484 (87%), Gaps = 5/484 (1%)
Frame = -3
Query: 3410 KPDVLTYNVMIKLCARAGRKELVGFVLERILDEGIVPCVTTLHSIVAAYVGFNDLETAEK 3231
+PDVLTYNVMIKLCAR RK+L+ FVLERILD+GI C+TTLHS+VAAYVGF DLETAEK
Sbjct: 264 EPDVLTYNVMIKLCARVDRKDLLVFVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEK 323
Query: 3230 LVQAMREGRRDVCKIIRDSNAKDI-NVAGDVFRKLLPKSVAPEKYEPQLLPKSYAPDSRM 3054
LVQAMREGR+D+CKI+RD N+++ N G +F KLLP SV EP LLPK+YAPDSR+
Sbjct: 324 LVQAMREGRQDLCKILRDVNSENPGNNEGYIFDKLLPNSVERNNSEPPLLPKAYAPDSRI 383
Query: 3053 YTTLMKGYMKVGRVSDVVRMLEAMRHQTDKASHPDHVTYTTVVSALVRVGAMDRARQVLA 2874
YTTLMKGYMK GRV+D VRMLEAMRHQ D S PDHVTYTTVVSALV+ G+MDRARQVLA
Sbjct: 384 YTTLMKGYMKEGRVTDTVRMLEAMRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLA 443
Query: 2873 EMARVGVPANRITYNILLKGYCQQVQIEKAKELIHEMEVEAEIEPDVVSYNIMIDGCILV 2694
EM R+GVPANR+TYNILLKGYC+Q+QI+KAKEL+ EM + I PDVVSYN +IDGCILV
Sbjct: 444 EMTRIGVPANRVTYNILLKGYCEQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILV 503
Query: 2693 DDSAGALAYFNEMRTRGITPSKVSYTTLMKAFAMTGQPKLVNNVFNEMLKDPRVKVDLVA 2514
DDSAGALAYFNEMR RGI P+K+SYTTLMKAFA++GQPKL N VF+EML+DPRVKVDLVA
Sbjct: 504 DDSAGALAYFNEMRARGIAPTKISYTTLMKAFALSGQPKLANKVFDEMLRDPRVKVDLVA 563
Query: 2513 WNMLVEGYCRQGLVEEAKKVIQRMRDNGFEPDVATYGSLANGIAVARKPGEALLLWNEIK 2334
WNMLVE +CR GLVEEAKK +QRMR+NGF P+VATYGSLANGIA+ARKPGEALLLWNE+K
Sbjct: 564 WNMLVEAHCRLGLVEEAKKTVQRMRENGFYPNVATYGSLANGIALARKPGEALLLWNEVK 623
Query: 2333 ERLKAEKEG--TSPSRPPLKPDAGLLDTLADVCVRSAFFKKALEIGACMEEYGISPNKTK 2160
ER ++EG + S PPLKPD GLLDTLAD+CVR+AFF+KALEI ACMEE GI PNK+K
Sbjct: 624 ERCVVKEEGEISKSSPPPLKPDEGLLDTLADICVRAAFFRKALEIVACMEENGIPPNKSK 683
Query: 2159 YTRIYVEMHSRMFTSKHASRARQDKRSDRKRAAEAFKFWLGLPNSYYGSEWRLEP--GND 1986
YTRIYVEMHSRMFTSKHAS+ARQD+RS+RKRAAEAFKFWLGLPNSYYGSEWRLEP G+D
Sbjct: 684 YTRIYVEMHSRMFTSKHASKARQDRRSERKRAAEAFKFWLGLPNSYYGSEWRLEPIDGDD 743
Query: 1985 YTED 1974
Y D
Sbjct: 744 YASD 747
Score = 76.6 bits (187), Expect = 4e-11
Identities = 68/294 (23%), Positives = 114/294 (38%), Gaps = 47/294 (15%)
Frame = -3
Query: 3068 PDSRMYTTLMKGYMKVGRVSDVVRMLEAMRHQTDKASHPDHVTYTTVVSALVRVGAMDRA 2889
PD+ Y ++ +G D R L+ T + PD +TY ++ RV D
Sbjct: 230 PDTAAYNAVLNACANLG---DTKRFLQVFEEMTQLGAEPDVLTYNVMIKLCARVDRKDLL 286
Query: 2888 RQVLAEMARVGVPANRITYNILLKGYCQQVQIEKAKELIHEM------------EVEAE- 2748
VL + G+ T + L+ Y +E A++L+ M +V +E
Sbjct: 287 VFVLERILDKGIQLCMTTLHSLVAAYVGFGDLETAEKLVQAMREGRQDLCKILRDVNSEN 346
Query: 2747 ------------------------------IEPDVVSYNIMIDGCI---LVDDSAGALAY 2667
PD Y ++ G + V D+ L
Sbjct: 347 PGNNEGYIFDKLLPNSVERNNSEPPLLPKAYAPDSRIYTTLMKGYMKEGRVTDTVRMLEA 406
Query: 2666 FNEMRTRGITPSKVSYTTLMKAFAMTGQPKLVNNVFNEMLKDPRVKVDLVAWNMLVEGYC 2487
P V+YTT++ A G V EM + V + V +N+L++GYC
Sbjct: 407 MRHQDDSTSQPDHVTYTTVVSALVKAGSMDRARQVLAEMTR-IGVPANRVTYNILLKGYC 465
Query: 2486 RQGLVEEAKKVIQRM-RDNGFEPDVATYGSLANGIAVARKPGEALLLWNEIKER 2328
Q +++AK++++ M D G PDV +Y +L +G + AL +NE++ R
Sbjct: 466 EQLQIDKAKELVREMVDDEGIVPDVVSYNTLIDGCILVDDSAGALAYFNEMRAR 519
>ref|XP_002322855.1| predicted protein [Populus trichocarpa] gi|222867485|gb|EEF04616.1|
predicted protein [Populus trichocarpa]
Length = 751
Score = 718 bits (1853), Expect = 0.0
Identities = 355/493 (72%), Positives = 414/493 (83%), Gaps = 17/493 (3%)
Frame = -3
Query: 3410 KPDVLTYNVMIKLCARAGRKELVGFVLERILDEGIVPCVTTLHSIVAAYVGFNDLETAEK 3231
+PD+LTYN+MIKLCAR RK+L+ FVLER++++GI C+TTLHS+VAAYVGF DLET E+
Sbjct: 259 EPDILTYNIMIKLCARCNRKDLLVFVLERVIEKGIPLCMTTLHSLVAAYVGFGDLETVER 318
Query: 3230 LVQAMREGRRDVCKIIRDSNAKDIN------------VAGDVFRKLLPKSVAPEKYEPQL 3087
+VQAMREGRRD+CKI+R++N +D N + VF KLLP V EP L
Sbjct: 319 MVQAMREGRRDLCKILREANLEDFNEDEENEVLDSSQIGVSVFEKLLPNLVEVSNSEPPL 378
Query: 3086 LPKSYAPDSRMYTTLMKGYMKVGRVSDVVRMLEAMRHQTDKASHPDHVTYTTVVSALVRV 2907
LPK +APDSR++TTLMKGYMK GRV+D VRMLEAMR Q D PDH+TYTTV+SALV+
Sbjct: 379 LPKVFAPDSRIFTTLMKGYMKQGRVTDTVRMLEAMRCQDDSKGQPDHITYTTVISALVKA 438
Query: 2906 GAMDRARQVLAEMARVGVPANRITYNILLKGYCQQVQIEKAKELIHEMEVEAEIEPDVVS 2727
G+MD ARQVLAEM R+GVPANRITYNILLKGYCQQ+QI+KAKEL+ EM + IEPDVVS
Sbjct: 439 GSMDPARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELLKEMADDVNIEPDVVS 498
Query: 2726 YNIMIDGCILVDDSAGALAYFNEMRTRGITPSKVSYTTLMKAFAMTGQPKLVNNVFNEML 2547
YN +IDGCILVDDSAGALA+FNEMRT+GI P+K+SYTTLMKAFA++GQPKL N VF+EML
Sbjct: 499 YNTLIDGCILVDDSAGALAFFNEMRTKGIMPTKISYTTLMKAFALSGQPKLANKVFDEML 558
Query: 2546 KDPRVKVDLVAWNMLVEGYCRQGLVEEAKKVIQRMRDNGFEPDVATYGSLANGIAVARKP 2367
KDPRVK DLVAWNML+EGYCR GLV+EAK VIQRM++NGF PDVATYGSLANGI++ARKP
Sbjct: 559 KDPRVKADLVAWNMLLEGYCRLGLVDEAKTVIQRMKENGFHPDVATYGSLANGISLARKP 618
Query: 2366 GEALLLWNEIKERLKAEKEGTSPSRP----PLKPDAGLLDTLADVCVRSAFFKKALEIGA 2199
GEALLLW E+KER + + EG S + PLKPD LL TLAD+CVR+AFF+KALEI A
Sbjct: 619 GEALLLWKEVKERWEVKGEGESSNSDSPLLPLKPDEELLATLADICVRAAFFQKALEIVA 678
Query: 2198 CMEEYGISPNKTKYTRIYVEMHSRMFTSKHASRARQDKRSDRKRAAEAFKFWLGLPNSYY 2019
CMEE GI PNKTKY +IYVEMHSRMFTSKHAS+ARQD+R +RKRAAEAFKFWLGLPNSYY
Sbjct: 679 CMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARQDRRRERKRAAEAFKFWLGLPNSYY 738
Query: 2018 GSEWRLEPGN-DY 1983
GSEWRL+PG+ DY
Sbjct: 739 GSEWRLDPGDPDY 751
>ref|XP_002525184.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535481|gb|EEF37150.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 740
Score = 711 bits (1834), Expect = 0.0
Identities = 349/494 (70%), Positives = 410/494 (82%), Gaps = 22/494 (4%)
Frame = -3
Query: 3410 KPDVLTYNVMIKLCARAGRKELVGFVLERILDEGIVPCVTTLHSIVAAYVGFNDLETAEK 3231
+PD+LTYNVMIKLCAR RK+L+ FVLER++ + I C+TTLHS+VAAYVGF DLETAE
Sbjct: 244 EPDILTYNVMIKLCARCDRKDLLVFVLERVIQKRIPLCMTTLHSLVAAYVGFGDLETAEI 303
Query: 3230 LVQAMREGRRDVCKIIRDSNAKDINVAGD-----------------VFRKLLPKSVAPEK 3102
+ QAMREGRRD+CKI+R+ N +D+ G+ VF KLLP S+
Sbjct: 304 MAQAMREGRRDLCKILREVNMEDLGYYGEDVIENSQRLDQNRKNMFVFEKLLPNSIQSGD 363
Query: 3101 YEPQLLPKSYAPDSRMYTTLMKGYMKVGRVSDVVRMLEAMRHQTDKASHPDHVTYTTVVS 2922
EP LLPK YAPDSR+YTTLMKGYM GRVSD +RMLEAMRHQ D ASHPDHV+YTTV+S
Sbjct: 364 TEPSLLPKVYAPDSRIYTTLMKGYMNQGRVSDTIRMLEAMRHQDDNASHPDHVSYTTVIS 423
Query: 2921 ALVRVGAMDRARQVLAEMARVGVPANRITYNILLKGYCQQVQIEKAKELIHEMEVEAEIE 2742
ALV+ G+MDRARQVLAEM R+GVPANRITYNILLKG+CQ +QI+KAKEL+ EM+ AEIE
Sbjct: 424 ALVKAGSMDRARQVLAEMTRIGVPANRITYNILLKGHCQHLQIDKAKELLKEMDENAEIE 483
Query: 2741 PDVVSYNIMIDGCILVDDSAGALAYFNEMRTRGITPSKVSYTTLMKAFAMTGQPKLVNNV 2562
PDVVSYN MIDGCI VDDSAGALA+FNEMR +GI P+K+SYTTLMKAF+++GQPKL N V
Sbjct: 484 PDVVSYNTMIDGCIQVDDSAGALAFFNEMREKGIAPTKISYTTLMKAFSLSGQPKLANQV 543
Query: 2561 FNEMLKDPRVKVDLVAWNMLVEGYCRQGLVEEAKKVIQRMRDNGFEPDVATYGSLANGIA 2382
F+EM KDPRVKVDL+AWN+LVE YC+ GLVE+AKK+IQRM++NGF P+VATYGSLA+GIA
Sbjct: 544 FDEMFKDPRVKVDLIAWNVLVEAYCKLGLVEQAKKIIQRMKENGFHPNVATYGSLASGIA 603
Query: 2381 VARKPGEALLLWNEIKERLKAEKEGTS-----PSRPPLKPDAGLLDTLADVCVRSAFFKK 2217
+ARKPGEAL+LWNE+KERL+ +KEG + P P KPD G+LDTLAD+CVR+A F+K
Sbjct: 604 LARKPGEALILWNEVKERLEMQKEGHNSKSDLPPPPAFKPDEGMLDTLADICVRAALFQK 663
Query: 2216 ALEIGACMEEYGISPNKTKYTRIYVEMHSRMFTSKHASRARQDKRSDRKRAAEAFKFWLG 2037
ALEI ACMEE GI PNK KY +IYVEMHSRMFTSKHAS+AR D+R +RKRAAEAFKFWLG
Sbjct: 664 ALEIVACMEENGIFPNKMKYKKIYVEMHSRMFTSKHASQARVDRRRERKRAAEAFKFWLG 723
Query: 2036 LPNSYYGSEWRLEP 1995
LPNSYYGSEW + P
Sbjct: 724 LPNSYYGSEWGVGP 737
>ref|NP_187576.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204290|sp|Q9SF38.1|PP222_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g09650, chloroplastic; AltName: Full=Protein HIGH
CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor
gi|6682243|gb|AAF23295.1|AC016661_20 hypothetical protein
[Arabidopsis thaliana] gi|332641272|gb|AEE74793.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 778
Score = 709 bits (1829), Expect = 0.0
Identities = 354/512 (69%), Positives = 415/512 (81%), Gaps = 37/512 (7%)
Frame = -3
Query: 3410 KPDVLTYNVMIKLCARAGRKELVGFVLERILDEGIVPCVTTLHSIVAAYVGFNDLETAEK 3231
+PDVLTYNVMIKLCAR GRKEL+ FVLERI+D+GI C+TT+HS+VAAYVGF DL TAE+
Sbjct: 268 EPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327
Query: 3230 LVQAMREGRRDVCKIIRDSNAKDINVAG-------------------------------D 3144
+VQAMRE RRD+CK++R+ NA+D+ D
Sbjct: 328 IVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVD 387
Query: 3143 VFRKLLPKSVAPEKYEPQLLPKSYAPDSRMYTTLMKGYMKVGRVSDVVRMLEAMRHQTDK 2964
VF+KLLP SV P EP LLPK +APDSR+YTTLMKGYMK GRV+D RMLEAMR Q D+
Sbjct: 388 VFKKLLPNSVDPSG-EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDR 446
Query: 2963 ASHPDHVTYTTVVSALVRVGAMDRARQVLAEMARVGVPANRITYNILLKGYCQQVQIEKA 2784
SHPD VTYTTVVSA V G MDRARQVLAEMAR+GVPANRITYN+LLKGYC+Q+QI++A
Sbjct: 447 NSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 2783 KELIHEMEVEAEIEPDVVSYNIMIDGCILVDDSAGALAYFNEMRTRGITPSKVSYTTLMK 2604
++L+ EM +A IEPDVVSYNI+IDGCIL+DDSAGALA+FNEMRTRGI P+K+SYTTLMK
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 2603 AFAMTGQPKLVNNVFNEMLKDPRVKVDLVAWNMLVEGYCRQGLVEEAKKVIQRMRDNGFE 2424
AFAM+GQPKL N VF+EM+ DPRVKVDL+AWNMLVEGYCR GL+E+A++V+ RM++NGF
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 2423 PDVATYGSLANGIAVARKPGEALLLWNEIKERLKAEKE------GTSPSRPPLKPDAGLL 2262
P+VATYGSLANG++ ARKPG+ALLLW EIKER +K+ + P+ P LKPD GLL
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLL 686
Query: 2261 DTLADVCVRSAFFKKALEIGACMEEYGISPNKTKYTRIYVEMHSRMFTSKHASRARQDKR 2082
DTLAD+CVR+AFFKKALEI ACMEE GI PNKTKY +IYVEMHSRMFTSKHAS+AR D+R
Sbjct: 687 DTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRR 746
Query: 2081 SDRKRAAEAFKFWLGLPNSYYGSEWRLEPGND 1986
+RKRAAEAFKFWLGLPNSYYGSEW+L P D
Sbjct: 747 VERKRAAEAFKFWLGLPNSYYGSEWKLGPRED 778
>dbj|BAD95223.1| hypothetical protein [Arabidopsis thaliana]
Length = 778
Score = 709 bits (1829), Expect = 0.0
Identities = 354/512 (69%), Positives = 415/512 (81%), Gaps = 37/512 (7%)
Frame = -3
Query: 3410 KPDVLTYNVMIKLCARAGRKELVGFVLERILDEGIVPCVTTLHSIVAAYVGFNDLETAEK 3231
+PDVLTYNVMIKLCAR GRKEL+ FVLERI+D+GI C+TT+HS+VAAYVGF DL TAE+
Sbjct: 268 EPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAER 327
Query: 3230 LVQAMREGRRDVCKIIRDSNAKDINVAG-------------------------------D 3144
+VQAMRE RRD+CK++R+ NA+D+ D
Sbjct: 328 IVQAMREKRRDLCKVLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVD 387
Query: 3143 VFRKLLPKSVAPEKYEPQLLPKSYAPDSRMYTTLMKGYMKVGRVSDVVRMLEAMRHQTDK 2964
VF+KLLP SV P EP LLPK +APDSR+YTTLMKGYMK GRV+D RMLEAMR Q D+
Sbjct: 388 VFKKLLPNSVDPSG-EPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDR 446
Query: 2963 ASHPDHVTYTTVVSALVRVGAMDRARQVLAEMARVGVPANRITYNILLKGYCQQVQIEKA 2784
SHPD VTYTTVVSA V G MDRARQVLAEMAR+GVPANRITYN+LLKGYC+Q+QI++A
Sbjct: 447 NSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRA 506
Query: 2783 KELIHEMEVEAEIEPDVVSYNIMIDGCILVDDSAGALAYFNEMRTRGITPSKVSYTTLMK 2604
++L+ EM +A IEPDVVSYNI+IDGCIL+DDSAGALA+FNEMRTRGI P+K+SYTTLMK
Sbjct: 507 EDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMK 566
Query: 2603 AFAMTGQPKLVNNVFNEMLKDPRVKVDLVAWNMLVEGYCRQGLVEEAKKVIQRMRDNGFE 2424
AFAM+GQPKL N VF+EM+ DPRVKVDL+AWNMLVEGYCR GL+E+A++V+ RM++NGF
Sbjct: 567 AFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFY 626
Query: 2423 PDVATYGSLANGIAVARKPGEALLLWNEIKERLKAEKE------GTSPSRPPLKPDAGLL 2262
P+VATYGSLANG++ ARKPG+ALLLW EIKER +K+ + P+ P LKPD GLL
Sbjct: 627 PNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLL 686
Query: 2261 DTLADVCVRSAFFKKALEIGACMEEYGISPNKTKYTRIYVEMHSRMFTSKHASRARQDKR 2082
DTLAD+CVR+AFFKKALEI ACMEE GI PNKTKY +IYVEMHSRMFTSKHAS+AR D+R
Sbjct: 687 DTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIYVEMHSRMFTSKHASQARIDRR 746
Query: 2081 SDRKRAAEAFKFWLGLPNSYYGSEWRLEPGND 1986
+RKRAAEAFKFWLGLPNSYYGSEW+L P D
Sbjct: 747 VERKRAAEAFKFWLGLPNSYYGSEWKLGPRED 778