BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00005398
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   369   e-100
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   367   3e-99
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   362   6e-98
ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation spec...   359   4e-97
gb|AFK44906.1| unknown [Medicago truncatula]                          357   2e-96

>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  369 bits (948), Expect = e-100
 Identities = 176/198 (88%), Positives = 181/198 (91%)
 Frame = +3

Query: 105 MVTSPIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 284
           MVTSP+VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 285 HPHILLLQIGNTFCKLPGGRLKPGENELDXXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 464
           HPHILLLQIGNTFCKLPGGRLKPGENE++                 QPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120

Query: 465 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 644
           RPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 645 PVISTIPQQLSRFQFNMI 698
           PVISTIPQQLSRFQFNM+
Sbjct: 181 PVISTIPQQLSRFQFNMM 198


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  367 bits (941), Expect = 3e-99
 Identities = 174/198 (87%), Positives = 180/198 (90%)
 Frame = +3

Query: 105 MVTSPIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 284
           MVTSP+VNTYPLSSYTFGTKEPK+EKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH 
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60

Query: 285 HPHILLLQIGNTFCKLPGGRLKPGENELDXXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 464
           HPHILLLQIGNTFCKLPGGRLKPGENE++                 QPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120

Query: 465 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 644
           RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 645 PVISTIPQQLSRFQFNMI 698
           PVISTIPQQLSRFQFNMI
Sbjct: 181 PVISTIPQQLSRFQFNMI 198


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  362 bits (929), Expect = 6e-98
 Identities = 174/198 (87%), Positives = 178/198 (89%)
 Frame = +3

Query: 105 MVTSPIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 284
           MV S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 285 HPHILLLQIGNTFCKLPGGRLKPGENELDXXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 464
           HPHILLLQIGNTFCKLPGGRLKPGENE++                  PDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 465 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 644
           RPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 645 PVISTIPQQLSRFQFNMI 698
           PVISTIPQQLSRFQFNMI
Sbjct: 181 PVISTIPQQLSRFQFNMI 198


>ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Vitis vinifera] gi|147788664|emb|CAN61008.1|
           hypothetical protein VITISV_016616 [Vitis vinifera]
           gi|302143896|emb|CBI22757.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  359 bits (922), Expect = 4e-97
 Identities = 170/200 (85%), Positives = 179/200 (89%)
 Frame = +3

Query: 105 MVTSPIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 284
           M+TSP+VNTYPLSSYTFGTKEPKMEKDTSVADRLARM+VNYMKEGMRT+V+AILLVQEH 
Sbjct: 1   MLTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHT 60

Query: 285 HPHILLLQIGNTFCKLPGGRLKPGENELDXXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 464
           HPHILLLQIGNTFCKLPGGRLKPGENE++                 QPDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWW 120

Query: 465 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 644
           RPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 645 PVISTIPQQLSRFQFNMINA 704
           PVISTIP  LSRFQFNMI A
Sbjct: 181 PVISTIPLHLSRFQFNMIAA 200


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  357 bits (917), Expect = 2e-96
 Identities = 171/198 (86%), Positives = 176/198 (88%)
 Frame = +3

Query: 105 MVTSPIVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 284
           M+ S +VNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLVQEHN
Sbjct: 1   MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 285 HPHILLLQIGNTFCKLPGGRLKPGENELDXXXXXXXXXXXXXXXXXQPDWQIGECVAIWW 464
           HPHILLLQIGNTFCKLPGGRLKPGENE++                  PDWQIGECVAIWW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120

Query: 465 RPNFETIMYPYCPPHITKPKECKKLFVVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 644
           RPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 645 PVISTIPQQLSRFQFNMI 698
           PVISTIPQQLSRFQF MI
Sbjct: 181 PVISTIPQQLSRFQFKMI 198