BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00005096
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   157   6e-36
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              153   7e-35
ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|2...   130   5e-28
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   129   1e-27
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...   129   1e-27

>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  157 bits (396), Expect = 6e-36
 Identities = 103/333 (30%), Positives = 151/333 (45%), Gaps = 6/333 (1%)
 Frame = +3

Query: 132  MACMLPHFKSPXXXXXXXXXXXXXXXXLKNRQPVCFQPQCSL-----PMTSTMTTIVGLE 296
            M+C+LP FK P                 KNR+ + F+ QC+L     P++++ T ++ +E
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLDIE 60

Query: 297  KLRLPTFESHISSIATERPLTYTGAIGLPLKEHLESTLVTE-IIPSGXXXXXXXXXXXXX 473
            KLRLP+ ESH +S+A  RP TY G +G P + + E+TL  E ++ S              
Sbjct: 61   KLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVA 120

Query: 474  XXXXXXXXXXXXXLMFGNEPSANTGHRTADIPTGSNFNQLKEAMLTDITLTGNVGFDSMD 653
                          + G   SA +  + A   +G + +Q +    T+    G +G DS+ 
Sbjct: 121  LAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG-DSVG 179

Query: 654  VEDIQDEENPVRFPIEEFDNLDPTDDEXXXXXXXXXXXIAVRSGRQTEXXXXXXXXXXXX 833
             E    + N ++   E+ D+L+PT +E           I VRS RQ E            
Sbjct: 180  AETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKA 239

Query: 834  XXXXXXXXXXXXXXXXXPALQEIDYSDPLRYXXXXXXXXXXXXXXXXXXXXAGVQVLMKL 1013
                              +LQE+DYSDPLRY                     G+Q L+KL
Sbjct: 240  SAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKL 299

Query: 1014 ENLHQELTERCGSEPTFPQWAAAAGVDQRTLRQ 1112
            E L ++L ER G +PTF QWAAAAGVDQ+TLR+
Sbjct: 300  EKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRR 332


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  153 bits (387), Expect = 7e-35
 Identities = 103/333 (30%), Positives = 151/333 (45%), Gaps = 6/333 (1%)
 Frame = +3

Query: 132  MACMLPHFKSPXXXXXXXXXXXXXXXXLKNRQPVCFQPQCSL-----PMTSTMTTIVGLE 296
            M+C+LP FK P                 KNR+ + F+ QC+L     P++++ T ++ +E
Sbjct: 1    MSCLLPQFKCPPDTFSTHPKLHILS---KNREAIYFRVQCALSTTSPPLSTSTTAVLDIE 57

Query: 297  KLRLPTFESHISSIATERPLTYTGAIGLPLKEHLESTLVTE-IIPSGXXXXXXXXXXXXX 473
            KLRLP+ ESH +S+A  RP TY G +G P + + E+TL  E ++ S              
Sbjct: 58   KLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAAAEAVA 117

Query: 474  XXXXXXXXXXXXXLMFGNEPSANTGHRTADIPTGSNFNQLKEAMLTDITLTGNVGFDSMD 653
                          + G   SA +  + A   +G + +Q +    T+    G +G DS+ 
Sbjct: 118  LAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG-DSVG 176

Query: 654  VEDIQDEENPVRFPIEEFDNLDPTDDEXXXXXXXXXXXIAVRSGRQTEXXXXXXXXXXXX 833
             E    + N ++   E+ D+L+PT +E           I VRS RQ E            
Sbjct: 177  AETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKA 236

Query: 834  XXXXXXXXXXXXXXXXXPALQEIDYSDPLRYXXXXXXXXXXXXXXXXXXXXAGVQVLMKL 1013
                              +LQE+DYSDPLRY                     G+Q L+KL
Sbjct: 237  SAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKL 296

Query: 1014 ENLHQELTERCGSEPTFPQWAAAAGVDQRTLRQ 1112
            E L ++L ER G +PTF QWAAAAGVDQ+TLR+
Sbjct: 297  EKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRR 329


>ref|XP_002325455.1| predicted protein [Populus trichocarpa] gi|222862330|gb|EEE99836.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  130 bits (328), Expect = 5e-28
 Identities = 103/330 (31%), Positives = 136/330 (41%), Gaps = 3/330 (0%)
 Frame = +3

Query: 132  MACMLPHFKSPXXXXXXXXXXXXXXXXLKNRQPVCFQPQCSLPMTS--TMTTIVGLEKLR 305
            M+C+LP FK                    N +P CF+ QC+L   S  T T ++ LEKLR
Sbjct: 1    MSCLLPQFKCQPDSFSIH----------SNGEPFCFRAQCALSSASPSTSTAVLNLEKLR 50

Query: 306  LPTFESHISSIATERPLTYTGAIGLPLKEHLESTLVTE-IIPSGXXXXXXXXXXXXXXXX 482
            LP+ ESH  SIA  RP TY G IG P +    ++L TE +I +                 
Sbjct: 51   LPSLESHSDSIAANRPWTYIGGIGPPKEPLFGTSLATETLIINDEAVIAAAAAEAVALAR 110

Query: 483  XXXXXXXXXXLMFGNEPSANTGHRTADIPTGSNFNQLKEAMLTDITLTGNVGFDSMDVED 662
                       M  N  S NT  +     T  +F+ +  ++LT       +G  S   E 
Sbjct: 111  AAVKVAKDAAEMAKNYCSVNTETKIPIASTADSFSSMW-SLLTGKERADIIGV-SFSAET 168

Query: 663  IQDEENPVRFPIEEFDNLDPTDDEXXXXXXXXXXXIAVRSGRQTEXXXXXXXXXXXXXXX 842
               EE   ++P EE D   PT +E           I VRS RQT+               
Sbjct: 169  GLREECSTQYPTEESDCFGPTHEELALLEKQLSESIVVRSKRQTQRKAKRARAAEKAAAN 228

Query: 843  XXXXXXXXXXXXXXPALQEIDYSDPLRYXXXXXXXXXXXXXXXXXXXXAGVQVLMKLENL 1022
                            +QE+D SDPLR+                     G+Q L+KLE +
Sbjct: 229  FVFMKSGSACKKKRVPVQEVDQSDPLRFFRGASTSSRLLSATEEVELSEGIQDLLKLERI 288

Query: 1023 HQELTERCGSEPTFPQWAAAAGVDQRTLRQ 1112
             +EL ER G +PTF QWAAAA VDQ TLR+
Sbjct: 289  EEELKERFGGKPTFAQWAAAARVDQITLRK 318


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  129 bits (324), Expect = 1e-27
 Identities = 107/335 (31%), Positives = 140/335 (41%), Gaps = 8/335 (2%)
 Frame = +3

Query: 132  MACMLPHFKSPXXXXXXXXXXXXXXXX-----LKNRQPVCFQPQCSLPMTS--TMTTIVG 290
            M+C+LP FK                        K+R+P+ ++ QC L  TS  T T ++ 
Sbjct: 2    MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCILSTTSPSTSTAVLD 61

Query: 291  LEKLRLPTFESHISSIATERPLTYTGAIGLPLKEHLESTLVTE-IIPSGXXXXXXXXXXX 467
            LEKLRLP+FE+   SIA   P TY             STL TE +I S            
Sbjct: 62   LEKLRLPSFEAPSDSIAPNSPWTYAT---------FGSTLATETLITSDEAVIAAAAAEA 112

Query: 468  XXXXXXXXXXXXXXXLMFGNEPSANTGHRTADIPTGSNFNQLKEAMLTDITLTGNVGFDS 647
                           L+  N PSA T  +   + + S  +  +    T+      +G DS
Sbjct: 113  VALARAAVKVAKDAALLVKNFPSAETESK---LTSPSTIDASRWPQFTETERARIIG-DS 168

Query: 648  MDVEDIQDEENPVRFPIEEFDNLDPTDDEXXXXXXXXXXXIAVRSGRQTEXXXXXXXXXX 827
            +  E    EE+ ++  I+E D L+ T  E           IAVRS RQTE          
Sbjct: 169  VATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVE 228

Query: 828  XXXXXXXXXXXXXXXXXXXPALQEIDYSDPLRYXXXXXXXXXXXXXXXXXXXXAGVQVLM 1007
                                +LQE+DYSDPLRY                    A +Q L+
Sbjct: 229  KAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLL 288

Query: 1008 KLENLHQELTERCGSEPTFPQWAAAAGVDQRTLRQ 1112
            KLE L +EL ER G +PTF QWAAAAGVDQRTLR+
Sbjct: 289  KLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRK 323


>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  129 bits (324), Expect = 1e-27
 Identities = 95/291 (32%), Positives = 125/291 (42%), Gaps = 1/291 (0%)
 Frame = +3

Query: 243  PQCSLPMTSTMTTIVGLEKLRLPTFESHISSIATERPLTYTGAIGLPLKEHLESTLVTE- 419
            PQC L   S  T ++ LEKLRLP+ E H  SI+  RP TY G IG   K    ++L  E 
Sbjct: 33   PQCVLSSASPSTAVLDLEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAET 92

Query: 420  IIPSGXXXXXXXXXXXXXXXXXXXXXXXXXXLMFGNEPSANTGHRTADIPTGSNFNQLKE 599
            +I +                            M  N  S     +     T  +F+ +  
Sbjct: 93   LIANDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYSSMKKETKIPIASTTDSFSSMW- 151

Query: 600  AMLTDITLTGNVGFDSMDVEDIQDEENPVRFPIEEFDNLDPTDDEXXXXXXXXXXXIAVR 779
            ++LT+      +G DS+  E    EE  V++P EE+D L+PT +E           IAVR
Sbjct: 152  SLLTEKERADIIG-DSVSAETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVR 210

Query: 780  SGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPALQEIDYSDPLRYXXXXXXXXXXX 959
            S RQTE                               LQE+D SDPLR+           
Sbjct: 211  SKRQTERKARRARAAEKAAANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLL 270

Query: 960  XXXXXXXXXAGVQVLMKLENLHQELTERCGSEPTFPQWAAAAGVDQRTLRQ 1112
                      G+Q L+KLE + +EL ER G EP+F QWAAAAGVDQ TLR+
Sbjct: 271  SATEEVELSEGIQDLLKLERIEEELKERFGGEPSFAQWAAAAGVDQLTLRK 321