BLASTX nr result

ID: Aconitum21_contig00004692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004692
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   87   1e-24
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    69   2e-19
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    69   2e-19
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              77   7e-19
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...    82   9e-18

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 86.7 bits (213), Expect(2) = 1e-24
 Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
 Frame = -2

Query: 582 LIPKELVYNYHTDNPQSRRAAKIDLKKAY-MVRWEAVQFATERLNSPQRMVTWIIECMKT 406
           L+  ELV+ Y+  N   R   KIDL+KA+  V WE +    + LN P+  VTW+  CM+T
Sbjct: 23  LLATELVHEYNRPNTSKRAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMET 82

Query: 405 ATYSIMIKWRTLWVLLRRQSRRGIRQGDPMSPYLFVLDVDLCTDLMQKCKA 253
             +S+ I           + RRG+RQGDP+SPYLF++ +++ + ++ +C A
Sbjct: 83  PKFSVSINGELAGYF---KGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAA 130



 Score = 53.1 bits (126), Expect(2) = 1e-24
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = -1

Query: 232 KCKSPFITHLSFADDLIVFMHGDIQTAQTLRNTLDVFHASTGLDTYIPKSYIF 74
           KC SP ITHL+FADD+++F  G+ ++   ++NTLD F  ++GL     K+ IF
Sbjct: 139 KCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTEKTEIF 191


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 69.3 bits (168), Expect(2) = 2e-19
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -2

Query: 582 LIPKELVYNYHTDNPQSRRAAKIDLKKAY-MVRWEAVQFATERLNSPQRMVTWIIECMKT 406
           L+  ELV N+  +   SR   ++DL KAY  V WE +    + LN P   + WI  C+ T
Sbjct: 117 LLASELVDNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCIST 176

Query: 405 ATYSIMIKWRTLWVLLRRQSRRGIRQGDPMSPYLFVLDVDL 283
            +YSI      +   +    ++GIRQGDPMS +LFVL +D+
Sbjct: 177 PSYSIAYNGELIGFFV---GKKGIRQGDPMSSHLFVLVMDI 214



 Score = 52.8 bits (125), Expect(2) = 2e-19
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 271 DAEVQSGTFKIQ*KCKSPFITHLSFADDLIVFMHGDIQTAQTLRNTLDVFHASTGLDTYI 92
           D     G F +  KC +P ITHLSFADD++VF  G + +   + + LDVF   +GL   +
Sbjct: 220 DLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINL 279

Query: 91  PKS 83
            K+
Sbjct: 280 QKT 282


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 69.3 bits (168), Expect(2) = 2e-19
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -2

Query: 582 LIPKELVYNYHTDNPQSRRAAKIDLKKAY-MVRWEAVQFATERLNSPQRMVTWIIECMKT 406
           L+  ELV N+  +   SR   ++DL KAY  V WE +    + LN P   + WI  C+ T
Sbjct: 117 LLASELVDNFQAEGDTSRGCLQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCIST 176

Query: 405 ATYSIMIKWRTLWVLLRRQSRRGIRQGDPMSPYLFVLDVDL 283
            +YSI      +   +    ++GIRQGDPMS +LFVL +D+
Sbjct: 177 PSYSIAYNGELIGFFV---GKKGIRQGDPMSSHLFVLVMDI 214



 Score = 52.8 bits (125), Expect(2) = 2e-19
 Identities = 25/63 (39%), Positives = 36/63 (57%)
 Frame = -1

Query: 271 DAEVQSGTFKIQ*KCKSPFITHLSFADDLIVFMHGDIQTAQTLRNTLDVFHASTGLDTYI 92
           D     G F +  KC +P ITHLSFADD++VF  G + +   + + LDVF   +GL   +
Sbjct: 220 DLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINL 279

Query: 91  PKS 83
            K+
Sbjct: 280 QKT 282


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 77.0 bits (188), Expect(2) = 7e-19
 Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
 Frame = -2

Query: 582 LIPKELVYNYHTDNPQSRRAAKIDLKKAY-MVRWEAVQFATERLNSPQRMVTWIIECMKT 406
           L+  ELV +YH ++  SR A KID+ KA+  V+W  ++     ++ P   V WI+ C+ T
Sbjct: 103 LLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCIST 162

Query: 405 ATYSIMIKWRTLWVLLRRQSRRGIRQGDPMSPYLFVLDVDLCTDLMQK 262
           A++S+ +    +      QS+RG+RQG  +SPYLFV+ +D+ + L+ +
Sbjct: 163 ASFSVQVNGELVGFF---QSKRGLRQGCSLSPYLFVMSMDVLSKLLDQ 207



 Score = 43.5 bits (101), Expect(2) = 7e-19
 Identities = 22/66 (33%), Positives = 34/66 (51%)
 Frame = -1

Query: 271 DAEVQSGTFKIQ*KCKSPFITHLSFADDLIVFMHGDIQTAQTLRNTLDVFHASTGLDTYI 92
           D    +  F    +CK   +THLSFADDL+V   G +++   +    D+F   +GL   +
Sbjct: 206 DQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISM 265

Query: 91  PKSYIF 74
            KS I+
Sbjct: 266 EKSTIY 271


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 82.4 bits (202), Expect(2) = 9e-18
 Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
 Frame = -2

Query: 582 LIPKELVYNYHTDNPQSRRAAKIDLKKAY-MVRWEAVQFATERLNSPQRMVTWIIECMKT 406
           L+  E+V+ Y+T N  SR   K+DL+KA+  VRW+ +  A   L  P++ V WI +C+ T
Sbjct: 571 LLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCIST 630

Query: 405 ATYSIMIKWRTLWVLLRRQSRRGIRQGDPMSPYLFVLDVDLCTDLMQ 265
             +S+M+   +       +S +G+RQGDP+SPYLFVL +++ + L++
Sbjct: 631 PYFSVMVNGSSSGFF---KSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674



 Score = 34.3 bits (77), Expect(2) = 9e-18
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = -1

Query: 277 RFDAEVQSGTFKIQ*KCKSPFITHLSFADDLIVFMHGDIQTAQTLRNTLDVFHASTGLDT 98
           RFDA    G  +   K     I+HL FADD++VF  G   +   +   LD F + +GL  
Sbjct: 676 RFDA----GYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHV 731

Query: 97  YIPKSYIF 74
              K+ ++
Sbjct: 732 NKDKTNLY 739


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