BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004682
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177262.1| pentatricopeptide repeat-containing protein [Ar...   268   6e-70
ref|XP_002888819.1| pentatricopeptide repeat-containing protein ...   266   2e-69
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   265   3e-69
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   265   3e-69
ref|XP_002531063.1| pentatricopeptide repeat-containing protein,...   263   1e-68

>ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71060, mitochondrial; Flags: Precursor
           gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical
           protein; 31939-30407 [Arabidopsis thaliana]
           gi|332197036|gb|AEE35157.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 510

 Score =  268 bits (684), Expect = 6e-70
 Identities = 127/178 (71%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 KVSPALVEGVLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDL 355
           K+SPAL+E VLKK+SNAG LALS F+WAE ++GFKHT+ +YNALIE+LGKIKQF+LIW L
Sbjct: 91  KLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSL 150

Query: 354 VDEMKRNGLLTKETFGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKS 175
           VD+MK   LL+KETF LI RRYARARK+KEAI  F+KME+ G K+E+SDFNR++DTLSKS
Sbjct: 151 VDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKS 210

Query: 174 RHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPDIV 1
           R+V +A ++FD+MKKKRF PD+K+YT+LLEGWGQE N+L V EV REMKDEGFEPD+V
Sbjct: 211 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVV 268



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
 Frame = -1

Query: 504 LKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDLVDEMKRNGLL 325
           L K  N G     F +   +K+ F+   +SY  L+E  G+      + ++  EMK  G  
Sbjct: 207 LSKSRNVGDAQKVFDKM--KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFE 264

Query: 324 TKET-FGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRL 148
                +G+I+  + +A+K +EAI  FN+ME+   K     F  LI+ L   + + +A   
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324

Query: 147 FDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPD 7
           F+  K   F  +  TY  L+  +   + +    +   EM+ +G  P+
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371



 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
 Frame = -1

Query: 447 RKQGFKHTSESYNALIEALGKIKQFRLIWDLVDEMK-RNGLLTKETFGLIMRRYARARKI 271
           + +GF+    +Y  +I A  K K++       +EM+ RN   +   F  ++      +K+
Sbjct: 259 KDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 318

Query: 270 KEAIETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVL 91
            +A+E F + +  G  LE   +N L+     S+ +++A++  DEM+ K   P+ +TY ++
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378

Query: 90  LEGWGQERNILTVKEVYREMKDE 22
           L    + +      EVY+ M  E
Sbjct: 379 LHHLIRMQRSKEAYEVYQTMSCE 401


>ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334660|gb|EFH65078.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 512

 Score =  266 bits (679), Expect = 2e-69
 Identities = 125/178 (70%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 KVSPALVEGVLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDL 355
           K+SPAL+E VLKK+SNAG LALS F+WAE ++GFKHT+ +YNALIE+LGKIKQF+LIW+L
Sbjct: 93  KLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNL 152

Query: 354 VDEMKRNGLLTKETFGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKS 175
           VD+MK+  LL+K+TF LI RRYARARK+KEAI  F+KME  G K+E+SDFNR++D LSKS
Sbjct: 153 VDDMKQKKLLSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKS 212

Query: 174 RHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPDIV 1
           R+V +A ++FD+MKKKRF PD+K+YT+LLEGWGQE N+L V EVY EMKDEGFEPD+V
Sbjct: 213 RNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVV 270



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
 Frame = -1

Query: 507 VLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDLVDEMKRNGL 328
           +L K  N G     F +   +K+ F+   +SY  L+E  G+      + ++  EMK  G 
Sbjct: 208 ILSKSRNVGDAQKVFDKM--KKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGF 265

Query: 327 LTKET-FGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHR 151
                 +G+I+  Y +A+K  EA+  FN+ME+   K     F  LI+ L   + + +A  
Sbjct: 266 EPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALE 325

Query: 150 LFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPD 7
            F+  K   F  +  TY  L+  +   + +    +   EM+ +G  P+
Sbjct: 326 FFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPN 373



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
 Frame = -1

Query: 447 RKQGFKHTSESYNALIEALGKIKQFRLIWDLVDEMK-RNGLLTKETFGLIMRRYARARKI 271
           + +GF+    +Y  +I A  K K++       +EM+ RN   +   F  ++      +K+
Sbjct: 261 KDEGFEPDVVAYGIIINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKL 320

Query: 270 KEAIETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVL 91
            +A+E F + +  G  LE   +N L+     S+ +++A +  DEM+ K   P+ +TY ++
Sbjct: 321 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDII 380

Query: 90  LEGWGQERNILTVKEVYREMKDE 22
           L    + +      EVY++M  E
Sbjct: 381 LHHLIRMQRTKEAYEVYQKMSCE 403


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  265 bits (678), Expect = 3e-69
 Identities = 123/178 (69%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 KVSPALVEGVLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDL 355
           ++SPAL+  VLKK+SNAG LALSFFRWAE+++GFKHT+ESYN LIEALGKIKQF +IW+L
Sbjct: 119 ELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNL 178

Query: 354 VDEMKRNGLLTKETFGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKS 175
           V +MKR G+L++ETF LI RRYARARK+KEA+E+F KMEK G ++  SDFNRL+DTL KS
Sbjct: 179 VSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKS 238

Query: 174 RHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPDIV 1
           R+VK+A  +FD+MK  RF PD+K+YT+LLEGWGQ++N+L + EVYREM+DEGFEPD+V
Sbjct: 239 RNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
 Frame = -1

Query: 435 FKHTSESYNALIEALGKIKQFRLIWDLVDEMKRNGLLTKE-TFGLIMRRYARARKIKEAI 259
           FK   +SY  L+E  G+ +    + ++  EM+  G      TFG+++  + +ARK  EAI
Sbjct: 256 FKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAI 315

Query: 258 ETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGW 79
             F++ME   +K     F  LI+ L   + +KEA   F+++K   F P+  TY  ++  +
Sbjct: 316 RLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAY 375

Query: 78  GQERNILTVKEVYREMKDEGFEPD 7
                +     +  EM+  G  P+
Sbjct: 376 CWSMKMAYAYRMVDEMRKSGVGPN 399


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  265 bits (678), Expect = 3e-69
 Identities = 123/178 (69%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 KVSPALVEGVLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDL 355
           ++SPAL+  VLKK+SNAG LALSFFRWAE+++GFKHT+ESYN LIEALGKIKQF +IW+L
Sbjct: 119 ELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNL 178

Query: 354 VDEMKRNGLLTKETFGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKS 175
           V +MKR G+L++ETF LI RRYARARK+KEA+E+F KMEK G ++  SDFNRL+DTL KS
Sbjct: 179 VSDMKRKGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKS 238

Query: 174 RHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPDIV 1
           R+VK+A  +FD+MK  RF PD+K+YT+LLEGWGQ++N+L + EVYREM+DEGFEPD+V
Sbjct: 239 RNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVV 296



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
 Frame = -1

Query: 435 FKHTSESYNALIEALGKIKQFRLIWDLVDEMKRNGLLTKE-TFGLIMRRYARARKIKEAI 259
           FK   +SY  L+E  G+ +    + ++  EM+  G      TFG+++  + +ARK  EAI
Sbjct: 256 FKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAI 315

Query: 258 ETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGW 79
             F++ME   +K     F  LI+ L   + +KEA   F+++K   F P+  TY  ++  +
Sbjct: 316 RLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAY 375

Query: 78  GQERNILTVKEVYREMKDEGFEPD 7
                +     +  EM+  G  P+
Sbjct: 376 CWSMKMAYAYRMVDEMRKSGVGPN 399


>ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529358|gb|EEF31324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  263 bits (672), Expect = 1e-68
 Identities = 123/178 (69%), Positives = 156/178 (87%)
 Frame = -1

Query: 534 KVSPALVEGVLKKVSNAGALALSFFRWAERKQGFKHTSESYNALIEALGKIKQFRLIWDL 355
           KVSPALV  VLK++SNAGALALSFF+WAE+++GF + +ESYNALI++LGKIKQF +IW+L
Sbjct: 110 KVSPALVLEVLKRLSNAGALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNL 169

Query: 354 VDEMKRNGLLTKETFGLIMRRYARARKIKEAIETFNKMEKLGMKLETSDFNRLIDTLSKS 175
           V++MKR G+LTKETF LI RRYAR+ K+KEA+ TF KMEK G+K+E++DFNRL+DTL KS
Sbjct: 170 VNDMKRKGVLTKETFALISRRYARSGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKS 229

Query: 174 RHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERNILTVKEVYREMKDEGFEPDIV 1
           R V  A  +FD+MK +RF PD+K+YT+LLEGWGQE+N+L + EVYREMKDEGFEPD+V
Sbjct: 230 RQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVV 287



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
 Frame = -1

Query: 420 ESYNALIEALGKIKQFRLIWDLVDEMKRNGLLTKE-TFGLIMRRYARARKIKEAIETFNK 244
           +SY  L+E  G+ K    + ++  EMK  G      T+G+++  Y + RK  +AIE F +
Sbjct: 252 KSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFRE 311

Query: 243 MEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVLLEGWGQERN 64
           ME    +     F  LI+ L   R + EA   F   K   F P+  TY  ++  +     
Sbjct: 312 MESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMR 371

Query: 63  ILTVKEVYREMKDEGFEPD 7
           I     +  EM+  G  P+
Sbjct: 372 IDDAYRMVDEMRKSGVGPN 390



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
 Frame = -1

Query: 447 RKQGFKHTSESYNALIEALGKIKQFRLIWDLVDEMK-RNGLLTKETFGLIMRRYARARKI 271
           + +GF+    +Y  LI A  K++++    +L  EM+ +N   +   F  ++      R++
Sbjct: 278 KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRL 337

Query: 270 KEAIETFNKMEKLGMKLETSDFNRLIDTLSKSRHVKEAHRLFDEMKKKRFTPDVKTYTVL 91
            EA+E F + +  G   ET  +N ++     S  + +A+R+ DEM+K    P+ +TY ++
Sbjct: 338 SEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDII 397

Query: 90  LEGWGQERNILTVKEVYREMKDE 22
           L    +         V+ +M  E
Sbjct: 398 LHHLIKAEKTTEAFSVFEKMSSE 420