BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004558
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_23193834.1| Ribonuclease H [Clostridium ultunense Esp] gi...    70   3e-10
ref|YP_003862207.1| ribonuclease H-like protein [Maribacter sp. ...    67   2e-09
ref|ZP_01062019.1| ribonuclease H-related protein [Leeuwenhoekie...    67   2e-09
ref|ZP_10370563.1| hypothetical protein HMPREF1071_01431 [Bacter...    67   4e-09
ref|ZP_07218233.1| ribonuclease H [Bacteroides sp. 20_3] gi|3008...    67   4e-09

>ref|ZP_23193834.1| Ribonuclease H [Clostridium ultunense Esp]
           gi|452990499|emb|CCQ98285.1| Ribonuclease H [Clostridium
           ultunense Esp]
          Length = 218

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 19/133 (14%)
 Frame = +1

Query: 55  KFYVVWVGTNPGIYRSWAECLPKVHGYPGAKYKAYSTYEEALAAYTMFFERNELPRPNLA 234
           K+YVVW G  PGIY  W EC  ++H +PGA+YK++ST EEA  AY    E + L +   +
Sbjct: 5   KYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAYKEAIEGSFLTKRKFS 64

Query: 235 FPSADAAQGSRLTPTLMVS----NPDVASTSMPVQPFKHS----------FSAGPLP--- 363
             S +++  S  TP   +     + DV +   P  P ++           FS GP+P   
Sbjct: 65  KSSNESSPSSFFTPDQGIDFDSISVDVGTRGNP-GPVEYKGVDTRTGEVIFSYGPIPKGT 123

Query: 364 --LVELPSALHAV 396
             L E  + +HA+
Sbjct: 124 NNLGEFLAIVHAL 136


>ref|YP_003862207.1| ribonuclease H-like protein [Maribacter sp. HTCC2170]
           gi|88710695|gb|EAR02927.1| ribonuclease H-related
           protein [Maribacter sp. HTCC2170]
          Length = 211

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 27/55 (49%), Positives = 38/55 (69%)
 Frame = +1

Query: 40  MAPHNKFYVVWVGTNPGIYRSWAECLPKVHGYPGAKYKAYSTYEEALAAYTMFFE 204
           MA  +KFYVVW G  PG+Y +W +C   + GY GA+YK++ST++EA  AY   +E
Sbjct: 1   MAKKSKFYVVWKGKRPGVYSTWEDCKAAITGYKGAQYKSFSTFDEAKKAYNSNYE 55


>ref|ZP_01062019.1| ribonuclease H-related protein [Leeuwenhoekiella blandensis MED217]
           gi|85829686|gb|EAQ48148.1| ribonuclease H-related
           protein [Leeuwenhoekiella blandensis MED217]
          Length = 211

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 17/123 (13%)
 Frame = +1

Query: 40  MAPHNKFYVVWVGTNPGIYRSWAECLPKVHGYPGAKYKAYSTYEEALAAYTMFF------ 201
           MA   KFYVVW G  PGIY SW +C   + G+ GA+YK++ T+ EA AAY   +      
Sbjct: 1   MAKKEKFYVVWQGKKPGIYTSWKDCKAMIDGFAGAQYKSFPTFPEAKAAYNKDYKDVKGT 60

Query: 202 ----------ERNELPRPNLAFPSADAAQGSRLTPTLMVSNPDVAS-TSMPVQPFKHSFS 348
                     E+ +   PNL   S DAA            NP +     +  Q  K  F 
Sbjct: 61  SKKKKTLTAEEKQKYGEPNLYSISVDAASS---------GNPGIMEYRGVDTQTGKQLFH 111

Query: 349 AGP 357
            GP
Sbjct: 112 QGP 114


>ref|ZP_10370563.1| hypothetical protein HMPREF1071_01431 [Bacteroides salyersiae
           CL02T12C01] gi|392673207|gb|EIY66670.1| hypothetical
           protein HMPREF1071_01431 [Bacteroides salyersiae
           CL02T12C01]
          Length = 211

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
 Frame = +1

Query: 55  KFYVVWVGTNPGIYRSWAECLPKVHGYPGAKYKAYSTYEEALAAY----TMFFERNELPR 222
           KFYVVW G  PGIY SW EC  +  GY GAKYK++ST+EEA  A+      +  +N +  
Sbjct: 5   KFYVVWEGGTPGIYTSWTECQLQTKGYEGAKYKSFSTHEEAERAFHSSPYAYIGKNAVKT 64

Query: 223 PNLAFPSADAAQGSRLTPTLMVSNPDVASTSMP 321
            N   PS++    + +  +L V   D A +  P
Sbjct: 65  ENKHKPSSEVLPAAVVENSLAV---DAACSGNP 94


>ref|ZP_07218233.1| ribonuclease H [Bacteroides sp. 20_3] gi|300829738|gb|EFK60391.1|
           ribonuclease H [Bacteroides sp. 20_3]
          Length = 211

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
 Frame = +1

Query: 52  NKFYVVWVGTNPGIYRSWAECLPKVHGYPGAKYKAYSTYEEAL----AAYTMFFERNELP 219
           NKFYVVW G NPGIY +WAEC  +V G  GAKYK++   EEA     A YT + +    P
Sbjct: 4   NKFYVVWKGLNPGIYDNWAECKAQVDGQEGAKYKSFENREEAAKAFEAGYTHYLKTASSP 63

Query: 220 RPNLAFPSADAAQGSRLTPTLMVSNP 297
           +             +RL P   + NP
Sbjct: 64  K-----------AVARLAPEAPIGNP 78