BLASTX nr result

ID: Aconitum21_contig00004525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004525
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su...   409   e-112
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              409   e-112
ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...   361   1e-97
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   357   3e-96
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   353   2e-95

>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 1586

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/299 (69%), Positives = 244/299 (81%), Gaps = 2/299 (0%)
 Frame = -1

Query: 892  TGAVGNVSSEISSIFFKVLQSQAGQNISRQLFEEMKRLHAASMHVNPRVQNGSAPDSSTS 713
            +GA  N++ E SSIF+KVLQ+   Q  S+QL EE+K LH ASMHV+PR+QN  A DSSTS
Sbjct: 769  SGAGMNINEETSSIFWKVLQANTDQIASKQLSEELKSLHRASMHVSPRLQNVGASDSSTS 828

Query: 712  DVYPEDIENAANSYFHQMFSGQLTIDAMVQMLARFKESSEEREQLIFDCMIKNLYEEYKF 533
            DVY  DIE  ANSYFHQ+FSGQLTID+M+QMLARFKESS+ REQ IF+CMI+NL+EEY+F
Sbjct: 829  DVYTNDIEAEANSYFHQIFSGQLTIDSMIQMLARFKESSDRREQSIFECMIQNLFEEYRF 888

Query: 532  FPKYPERQLKIAAVLFGSLIKHQLVSHLTLGIALRGVLDALRKSSDSKMFVFGAKALEQF 353
            FP+YPE+QLKIAA LFGSLIKHQLV+HLTLGIALRGVLDALRK +DSK+F FG KALEQF
Sbjct: 889  FPRYPEKQLKIAAGLFGSLIKHQLVTHLTLGIALRGVLDALRKPTDSKIFTFGTKALEQF 948

Query: 352  VDRLVEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHAEPN-GTAAIIDQHQASN 176
            +DRL+EWPQYC HILQISHLRGTH ELVAFIERALAR SS H+E N G  +  D H  S 
Sbjct: 949  LDRLIEWPQYCYHILQISHLRGTHPELVAFIERALARTSSSHSESNGGNNSSTDPHSGSA 1008

Query: 175  QVTLENMEVAESSWK-LPSTTSLPGQQLSSPLQMQQRHQGFLDDRQKSAPTSVTYTKPL 2
              TLEN+EV +SSW+ L S T+ PGQQ SSPL  QQRHQGFL DR K++ + + Y +P+
Sbjct: 1009 PATLENVEVPDSSWQLLGSRTTQPGQQTSSPLPAQQRHQGFLGDRHKTSASLINYGRPI 1067


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  409 bits (1052), Expect = e-112
 Identities = 208/299 (69%), Positives = 244/299 (81%), Gaps = 2/299 (0%)
 Frame = -1

Query: 892  TGAVGNVSSEISSIFFKVLQSQAGQNISRQLFEEMKRLHAASMHVNPRVQNGSAPDSSTS 713
            +GA  N++ E SSIF+KVLQ+   Q  S+QL EE+K LH ASMHV+PR+QN  A DSSTS
Sbjct: 609  SGAGMNINEETSSIFWKVLQANTDQIASKQLSEELKSLHRASMHVSPRLQNVGASDSSTS 668

Query: 712  DVYPEDIENAANSYFHQMFSGQLTIDAMVQMLARFKESSEEREQLIFDCMIKNLYEEYKF 533
            DVY  DIE  ANSYFHQ+FSGQLTID+M+QMLARFKESS+ REQ IF+CMI+NL+EEY+F
Sbjct: 669  DVYTNDIEAEANSYFHQIFSGQLTIDSMIQMLARFKESSDRREQSIFECMIQNLFEEYRF 728

Query: 532  FPKYPERQLKIAAVLFGSLIKHQLVSHLTLGIALRGVLDALRKSSDSKMFVFGAKALEQF 353
            FP+YPE+QLKIAA LFGSLIKHQLV+HLTLGIALRGVLDALRK +DSK+F FG KALEQF
Sbjct: 729  FPRYPEKQLKIAAGLFGSLIKHQLVTHLTLGIALRGVLDALRKPTDSKIFTFGTKALEQF 788

Query: 352  VDRLVEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHAEPN-GTAAIIDQHQASN 176
            +DRL+EWPQYC HILQISHLRGTH ELVAFIERALAR SS H+E N G  +  D H  S 
Sbjct: 789  LDRLIEWPQYCYHILQISHLRGTHPELVAFIERALARTSSSHSESNGGNNSSTDPHSGSA 848

Query: 175  QVTLENMEVAESSWK-LPSTTSLPGQQLSSPLQMQQRHQGFLDDRQKSAPTSVTYTKPL 2
              TLEN+EV +SSW+ L S T+ PGQQ SSPL  QQRHQGFL DR K++ + + Y +P+
Sbjct: 849  PATLENVEVPDSSWQLLGSRTTQPGQQTSSPLPAQQRHQGFLGDRHKTSASLINYGRPI 907


>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score =  361 bits (926), Expect = 1e-97
 Identities = 190/293 (64%), Positives = 222/293 (75%)
 Frame = -1

Query: 886  AVGNVSSEISSIFFKVLQSQAGQNISRQLFEEMKRLHAASMHVNPRVQNGSAPDSSTSDV 707
            +V N+  E SSIF KVL++Q G  IS QL +EM+RLH      NPR+QNG + DSST + 
Sbjct: 590  SVVNIYMEASSIFLKVLKAQTGLIISSQLSDEMERLHITITDSNPRLQNGGSADSSTPEP 649

Query: 706  YPEDIENAANSYFHQMFSGQLTIDAMVQMLARFKESSEEREQLIFDCMIKNLYEEYKFFP 527
            + +D+E  ANSYFHQMFSGQLTI+AMVQMLARFKES   REQLIF+CMI NL+EEY+FFP
Sbjct: 650  FSDDVEAEANSYFHQMFSGQLTIEAMVQMLARFKESPVRREQLIFECMIGNLFEEYRFFP 709

Query: 526  KYPERQLKIAAVLFGSLIKHQLVSHLTLGIALRGVLDALRKSSDSKMFVFGAKALEQFVD 347
            KYPERQLKIAAVLFGS+IKHQLV+HLTLGIALRGVLDALRK  DSKMF+FG KAL+QFVD
Sbjct: 710  KYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPPDSKMFIFGTKALDQFVD 769

Query: 346  RLVEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHAEPNGTAAIIDQHQASNQVT 167
            RL+EWPQYCNHILQISHLR THSE+V+FIER LARISSGH E +G       H   +Q +
Sbjct: 770  RLIEWPQYCNHILQISHLRTTHSEIVSFIERQLARISSGHLESDGNNGSASHHHGLSQAS 829

Query: 166  LENMEVAESSWKLPSTTSLPGQQLSSPLQMQQRHQGFLDDRQKSAPTSVTYTK 8
              N E+   S  +P +     QQLSS L +QQRH+  LD+R K    S   TK
Sbjct: 830  SGNGELI--SVNIPQSV----QQLSSTLNVQQRHESPLDERHKVFLASSNDTK 876


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  357 bits (915), Expect = 3e-96
 Identities = 189/278 (67%), Positives = 215/278 (77%), Gaps = 1/278 (0%)
 Frame = -1

Query: 877  NVSSEISSIFFKVLQSQAGQNISRQLFEEMKRLHAASMHVNPRVQNGSAPDSSTSDVYPE 698
            N+ SE  S F KVL++     IS QL EEM+RLH   M  NPR+QNGS+ DSST D + +
Sbjct: 605  NLYSETGSSFLKVLKAHTSLVISTQLSEEMERLHVTVMDSNPRLQNGSSADSSTPDGFSD 664

Query: 697  DIENAANSYFHQMFSGQLTIDAMVQMLARFKESSEEREQLIFDCMIKNLYEEYKFFPKYP 518
            D+E  ANSYFHQMFSG LTID+MVQMLARFKESS +REQLIF+CMI NL+EEY+FFPKYP
Sbjct: 665  DVEAEANSYFHQMFSGHLTIDSMVQMLARFKESSVKREQLIFECMIGNLFEEYRFFPKYP 724

Query: 517  ERQLKIAAVLFGSLIKHQLVSHLTLGIALRGVLDALRKSSDSKMFVFGAKALEQFVDRLV 338
            ERQLKIAA+LFGS+IKHQLV+HLTLGIALRGVLDALRK  DSKMFVFG KALE FVDRL+
Sbjct: 725  ERQLKIAALLFGSVIKHQLVTHLTLGIALRGVLDALRKPPDSKMFVFGTKALENFVDRLI 784

Query: 337  EWPQYCNHILQISHLRGTHSELVAFIERALARISSGHAEPNG-TAAIIDQHQASNQVTLE 161
            EWPQYCNHILQISHLRGTH++LVAFIERALARISSGH E +G   A    H   +Q    
Sbjct: 785  EWPQYCNHILQISHLRGTHADLVAFIERALARISSGHLESDGINNASAAHHHGLSQAASV 844

Query: 160  NMEVAESSWKLPSTTSLPGQQLSSPLQMQQRHQGFLDD 47
            N E   +S  +       GQQLSS L +QQRH+  LDD
Sbjct: 845  NGE--SNSINIQQA----GQQLSSTLHLQQRHESSLDD 876


>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  353 bits (907), Expect = 2e-95
 Identities = 190/299 (63%), Positives = 233/299 (77%), Gaps = 2/299 (0%)
 Frame = -1

Query: 892  TGAVGNVSSEISSIFFKVLQSQAGQNISRQLFEEMKRLHAASMHVNPRVQNGSAPDSSTS 713
            +GA+ ++ +E ++   KVL+S      SRQL EE++RLH + +  NPR+QNG   DSSTS
Sbjct: 594  SGAILSLYAEAAATILKVLKSHTDLVASRQLSEELERLHVSIIDTNPRLQNGGTADSSTS 653

Query: 712  DVYPEDIENAANSYFHQMFSGQLTIDAMVQMLARFKESSEEREQLIFDCMIKNLYEEYKF 533
            D Y +DIE  ANSYFHQMFS QLTI+AMVQMLARFKESS +RE+ IF+CMI NL+EEY+F
Sbjct: 654  DGYADDIEAEANSYFHQMFSDQLTINAMVQMLARFKESSVKREKSIFECMIANLFEEYRF 713

Query: 532  FPKYPERQLKIAAVLFGSLIKHQLVSHLTLGIALRGVLDALRKSSDSKMFVFGAKALEQF 353
            FPKYPERQLKIAAVLFGS+IKHQLV+HL+LGIALR VLDALRK +DSKMF+FG+ ALEQF
Sbjct: 714  FPKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQF 773

Query: 352  VDRLVEWPQYCNHILQISHLRGTHSELVAFIERALARISSGHAEPNGT--AAIIDQHQAS 179
            VDRL+EWPQYCNHILQISHLR THSE+V+FIE+ALARISSGH + +G   A++I  H  S
Sbjct: 774  VDRLIEWPQYCNHILQISHLRSTHSEIVSFIEQALARISSGHLDVDGASHASVISNHH-S 832

Query: 178  NQVTLENMEVAESSWKLPSTTSLPGQQLSSPLQMQQRHQGFLDDRQKSAPTSVTYTKPL 2
             Q T+ ++E++ SS         PGQQ  S LQ+QQR +  LDDR K++  S T  KPL
Sbjct: 833  AQATIGHVELSGSS------VIQPGQQHLS-LQLQQRRENPLDDRHKASVGSSTDVKPL 884


Top