BLASTX nr result

ID: Aconitum21_contig00004277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004277
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera]   157   1e-36
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   154   7e-36
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   154   9e-36
ref|XP_003543528.1| PREDICTED: transcription initiation factor I...   154   1e-35
ref|XP_003547006.1| PREDICTED: transcription initiation factor I...   140   1e-31

>emb|CAN83895.1| hypothetical protein VITISV_039114 [Vitis vinifera]
          Length = 630

 Score =  157 bits (396), Expect = 1e-36
 Identities = 91/185 (49%), Positives = 105/185 (56%), Gaps = 4/185 (2%)
 Frame = +3

Query: 9   AGGPTPTP-VHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXXNVQTP 185
           +G P PTP VHDLNV            AE                           +QTP
Sbjct: 68  SGAPAPTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTP----------------IQTP 111

Query: 186 LPGSSDHSIYHHST-PSDYTSGHDTVGVNDVKPGRPSPYMQAPSPWMNPRP-LGVDVNVA 359
           LPG  D+S+Y+  T P++Y +  D  G  D+K GRP  YM  PSPWM  RP L VDVNVA
Sbjct: 112 LPGMGDNSMYNIPTGPTEYPAAQDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVA 171

Query: 360 YVEGRDEIDRGNPHQPMTQDFFMMSAGKRKREDF-GPLQGGGYIPQQDGSGDATFDGFQT 536
           YVEGRDE DRGN  QP+TQDFFMMS+GKRKREDF       GYIPQQDG+GD   + F+ 
Sbjct: 172 YVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEV 231

Query: 537 ELYPY 551
           E Y Y
Sbjct: 232 EGYYY 236


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
           gi|297746029|emb|CBI16085.3| unnamed protein product
           [Vitis vinifera]
          Length = 393

 Score =  154 bits (390), Expect = 7e-36
 Identities = 89/182 (48%), Positives = 104/182 (57%), Gaps = 4/182 (2%)
 Frame = +3

Query: 9   AGGPTPTP-VHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXXNVQTP 185
           +G P PTP VHDLNV            AE                           +QTP
Sbjct: 68  SGAPAPTPPVHDLNVPYEGTEEYETPTAEILFPPTPLQTP----------------IQTP 111

Query: 186 LPGSSDHSIYHHST-PSDYTSGHDTVGVNDVKPGRPSPYMQAPSPWMNPRP-LGVDVNVA 359
           LPG  D+S+Y+  T P++Y +  D  G  D+K GRP  YM  PSPWM  RP L VDVNVA
Sbjct: 112 LPGMGDNSMYNIPTGPTEYPAAQDGGGATDMKSGRPPSYMPPPSPWMQQRPPLSVDVNVA 171

Query: 360 YVEGRDEIDRGNPHQPMTQDFFMMSAGKRKREDF-GPLQGGGYIPQQDGSGDATFDGFQT 536
           YVEGRDE DRGN  QP+TQDFFMMS+GKRKREDF       GYIPQQDG+GD   + F+ 
Sbjct: 172 YVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSGYIPQQDGAGDPAPEVFEV 231

Query: 537 EL 542
           E+
Sbjct: 232 EV 233


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 1 [Glycine max]
          Length = 391

 Score =  154 bits (389), Expect = 9e-36
 Identities = 92/187 (49%), Positives = 108/187 (57%), Gaps = 7/187 (3%)
 Frame = +3

Query: 3   TAAGGPTP----TPVHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXX 170
           + A  PTP    TPVHDLNV            A+                          
Sbjct: 60  STAAKPTPGGPITPVHDLNVPYEGTDEYETPTADMLFPPTPLQTP--------------- 104

Query: 171 NVQTPLPGSSDHSIYHHST-PSDY-TSGHDTVGVNDVKPGRPSPYMQAPSPWMNPRPLGV 344
            +QTPLPG+ D+S Y+  T PSDY +SG+DT G  D K  RP+PYMQ+PSPWMN RP  +
Sbjct: 105 -IQTPLPGTGDNSTYNIPTGPSDYPSSGNDTGGNADGKGARPAPYMQSPSPWMNQRP-PL 162

Query: 345 DVNVAYVEGRDEIDRGNPHQPMTQDFFMMSAGKRKREDF-GPLQGGGYIPQQDGSGDATF 521
           DVNVAYVEGRDE DRG  +QP TQDFF M +GKRKR D       GGYIPQQDG+GDAT 
Sbjct: 163 DVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYIPQQDGAGDATH 222

Query: 522 DGFQTEL 542
             F+ E+
Sbjct: 223 GDFEIEV 229


>ref|XP_003543528.1| PREDICTED: transcription initiation factor IIA large subunit-like
           isoform 2 [Glycine max]
          Length = 384

 Score =  154 bits (388), Expect = 1e-35
 Identities = 92/186 (49%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
 Frame = +3

Query: 3   TAAGGPTP----TPVHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXX 170
           + A  PTP    TPVHDLNV            A+                          
Sbjct: 60  STAAKPTPGGPITPVHDLNVPYEGTDEYETPTADMLFPPTPLQTP--------------- 104

Query: 171 NVQTPLPGSSDHSIYHHST-PSDY-TSGHDTVGVNDVKPGRPSPYMQAPSPWMNPRPLGV 344
            +QTPLPG+ D+S Y+  T PSDY +SG+DT G  D K  RP+PYMQ+PSPWMN RP  +
Sbjct: 105 -IQTPLPGTGDNSTYNIPTGPSDYPSSGNDTGGNADGKGARPAPYMQSPSPWMNQRP-PL 162

Query: 345 DVNVAYVEGRDEIDRGNPHQPMTQDFFMMSAGKRKREDF-GPLQGGGYIPQQDGSGDATF 521
           DVNVAYVEGRDE DRG  +QP TQDFF M +GKRKR D       GGYIPQQDG+GDAT 
Sbjct: 163 DVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYIPQQDGAGDATH 222

Query: 522 DGFQTE 539
             F+ E
Sbjct: 223 GDFEIE 228


>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
           [Glycine max]
          Length = 390

 Score =  140 bits (354), Expect = 1e-31
 Identities = 85/180 (47%), Positives = 103/180 (57%), Gaps = 3/180 (1%)
 Frame = +3

Query: 12  GGPTPTPVHDLNVXXXXXXXXXXXXAEXXXXXXXXXXXXXXXXXXXXXXXXXXNVQTPLP 191
           GGP  TPVHDLNV            A+                           +QTPLP
Sbjct: 68  GGPI-TPVHDLNVPYEGTEEYETPTADMLFPPTPLQTP----------------IQTPLP 110

Query: 192 GSSDHSIYHHST-PSDY-TSGHDTVGVNDVKPGRPSPYMQAPSPWMNPRPLGVDVNVAYV 365
           G+ D+S Y+  T  +DY +SG+DT G  D K  RP+PYMQ  SPWMN RP  +DVNVAYV
Sbjct: 111 GTGDNSTYNIPTGANDYPSSGNDTGGNADGKGARPAPYMQPSSPWMNQRP-PLDVNVAYV 169

Query: 366 EGRDEIDRGNPHQPMTQDFFMMSAGKRKREDF-GPLQGGGYIPQQDGSGDATFDGFQTEL 542
           EGRDE D+G  +QP+TQDFF  ++GKRKR D       GGYIPQQDG+GDA    F+ E+
Sbjct: 170 EGRDEADKGTSNQPLTQDFFTRTSGKRKRNDLTSQYNVGGYIPQQDGAGDAAHGVFEIEV 229


Top