BLASTX nr result

ID: Aconitum21_contig00004200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004200
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525713.1| sgd1p, putative [Ricinus communis] gi|223535...   132   2e-38
ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-37
ref|XP_002873862.1| RNA binding protein [Arabidopsis lyrata subs...   127   7e-37
ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing...   128   9e-37
ref|XP_003548465.1| PREDICTED: nucleolar MIF4G domain-containing...   128   9e-37

>ref|XP_002525713.1| sgd1p, putative [Ricinus communis] gi|223535013|gb|EEF36696.1|
           sgd1p, putative [Ricinus communis]
          Length = 746

 Score =  132 bits (331), Expect(2) = 2e-38
 Identities = 65/85 (76%), Positives = 70/85 (82%)
 Frame = -1

Query: 260 TIDREVXXXXXXXXXXXXQRMNTDARRAIFCIIMSGEDYVDAFEKLLRLDLPGKQDREIM 81
           TID+EV            QRMNTDAR+AIFCIIMSGEDY+DAFEKLLRLDLPGKQDREIM
Sbjct: 524 TIDKEVLEAQKMLQLAASQRMNTDARKAIFCIIMSGEDYIDAFEKLLRLDLPGKQDREIM 583

Query: 80  RVLLKCCLQEKVFNKYYIVLASKLC 6
           RVL++CCLQEKVFNKYY  LASK C
Sbjct: 584 RVLVECCLQEKVFNKYYTALASKFC 608



 Score = 52.4 bits (124), Expect(2) = 2e-38
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = -2

Query: 463 QYIRIKKWLQKLRVEDVLLRDLKWSKLLD 377
           Q+ RIKKWLQKLRVED+L+R L WSKLLD
Sbjct: 470 QHTRIKKWLQKLRVEDILIRGLTWSKLLD 498


>ref|XP_002319180.1| predicted protein [Populus trichocarpa] gi|222857556|gb|EEE95103.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  127 bits (320), Expect(2) = 1e-37
 Identities = 62/85 (72%), Positives = 70/85 (82%)
 Frame = -1

Query: 260 TIDREVXXXXXXXXXXXXQRMNTDARRAIFCIIMSGEDYVDAFEKLLRLDLPGKQDREIM 81
           TID++V            QRMNTDAR+AIFCIIMSGEDY+DAFEKLLRLDL GKQDREIM
Sbjct: 108 TIDKDVLEAQKMLQLASSQRMNTDARKAIFCIIMSGEDYIDAFEKLLRLDLVGKQDREIM 167

Query: 80  RVLLKCCLQEKVFNKYYIVLASKLC 6
           RV+++CCLQEK+FNKYY  LASKLC
Sbjct: 168 RVIVECCLQEKIFNKYYTTLASKLC 192



 Score = 53.9 bits (128), Expect(2) = 1e-37
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -2

Query: 511 IFDIXXXXXXXXXXXAQYIRIKKWLQKLRVEDVLLRDLKWSKLLD 377
           IFDI           A + RIKKWLQKLRVE++L+R LKWSKLLD
Sbjct: 38  IFDIKNNKKRPKEETAPHARIKKWLQKLRVEEILIRGLKWSKLLD 82


>ref|XP_002873862.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319699|gb|EFH50121.1| RNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 776

 Score =  127 bits (319), Expect(2) = 7e-37
 Identities = 62/85 (72%), Positives = 69/85 (81%)
 Frame = -1

Query: 260 TIDREVXXXXXXXXXXXXQRMNTDARRAIFCIIMSGEDYVDAFEKLLRLDLPGKQDREIM 81
           T+D EV            QRMNTD+R+AIFC+IMS EDY+DAFEKLLRLDLPGKQDREIM
Sbjct: 554 TMDAEVVEAQKMLKLAEAQRMNTDSRKAIFCVIMSSEDYIDAFEKLLRLDLPGKQDREIM 613

Query: 80  RVLLKCCLQEKVFNKYYIVLASKLC 6
           RVL++CCLQEK FNKYY VLASKLC
Sbjct: 614 RVLVECCLQEKAFNKYYTVLASKLC 638



 Score = 51.6 bits (122), Expect(2) = 7e-37
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = -2

Query: 463 QYIRIKKWLQKLRVEDVLLRDLKWSKLLD 377
           Q  R+KKWLQKLRVEDVLLR L WSKLLD
Sbjct: 500 QNTRVKKWLQKLRVEDVLLRGLTWSKLLD 528


>ref|XP_003553340.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Glycine max]
          Length = 794

 Score =  128 bits (322), Expect(2) = 9e-37
 Identities = 63/84 (75%), Positives = 71/84 (84%)
 Frame = -1

Query: 257 IDREVXXXXXXXXXXXXQRMNTDARRAIFCIIMSGEDYVDAFEKLLRLDLPGKQDREIMR 78
           ID++V            Q+MNTDARRAIFCIIMSGEDY+DAFEKLLRL+LPGKQDR+IMR
Sbjct: 573 IDKDVLETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMR 632

Query: 77  VLLKCCLQEKVFNKYYIVLASKLC 6
           VL++CCLQEKVFNKYY VLASKLC
Sbjct: 633 VLVECCLQEKVFNKYYTVLASKLC 656



 Score = 50.1 bits (118), Expect(2) = 9e-37
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = -2

Query: 460 YIRIKKWLQKLRVEDVLLRDLKWSKLLD 377
           + RIKKWL+KLRV+D+L+R LKWSKLLD
Sbjct: 519 HTRIKKWLRKLRVDDILIRGLKWSKLLD 546


>ref|XP_003548465.1| PREDICTED: nucleolar MIF4G domain-containing protein 1-like
           [Glycine max]
          Length = 793

 Score =  128 bits (322), Expect(2) = 9e-37
 Identities = 63/84 (75%), Positives = 71/84 (84%)
 Frame = -1

Query: 257 IDREVXXXXXXXXXXXXQRMNTDARRAIFCIIMSGEDYVDAFEKLLRLDLPGKQDREIMR 78
           ID++V            Q+MNTDARRAIFCIIMSGEDY+DAFEKLLRL+LPGKQDR+IMR
Sbjct: 572 IDKDVHETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMR 631

Query: 77  VLLKCCLQEKVFNKYYIVLASKLC 6
           VL++CCLQEKVFNKYY VLASKLC
Sbjct: 632 VLVECCLQEKVFNKYYTVLASKLC 655



 Score = 50.1 bits (118), Expect(2) = 9e-37
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -2

Query: 460 YIRIKKWLQKLRVEDVLLRDLKWSKLLD 377
           + RIKKWLQKLRV+D+L+R  KWSKLLD
Sbjct: 518 HTRIKKWLQKLRVDDILIRGFKWSKLLD 545


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