BLASTX nr result

ID: Aconitum21_contig00004171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004171
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   524   e-147
ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   520   e-145
ref|XP_002525759.1| meiotic recombination repair protein, putati...   520   e-145
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   517   e-144
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   516   e-144

>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
           sativus]
          Length = 739

 Score =  524 bits (1350), Expect = e-147
 Identities = 247/269 (91%), Positives = 261/269 (97%)
 Frame = +3

Query: 6   TRDDTSDTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIADQKQVDFLLLGGDLFHE 185
           +R++  +TLRVLVATDCHLGY+EKDEIRR DSF+AFEEICSIA+QKQVDFLLLGGDLFHE
Sbjct: 5   SREEMKNTLRVLVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVDFLLLGGDLFHE 64

Query: 186 NKPSRSTLVKTIEILRRYCLNDKPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSI 365
           NKPSRSTLVK IEILRR+CLNDKPVQFQVVSDQT+NF N FGHVNYEDPHFNVGLPVFSI
Sbjct: 65  NKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYEDPHFNVGLPVFSI 124

Query: 366 HGNHDDPAGVDNLSAIDILSACNLVNYFGKMGLGGSGVGQITICPILIRKGSTSVALYGL 545
           HGNHDDPAGVDNLSA+DILSACNLVNYFGKM LGGSGVGQIT+CPILIRKGSTSVALYGL
Sbjct: 125 HGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPILIRKGSTSVALYGL 184

Query: 546 GNIRDERLNRMFQTPHAVQWMRPEAEEGCEVSDWFNILVLHQNRVKANPKNAINEHFLPR 725
           GNIRDERLNRMFQTPHAVQWMRPEA+EGC+V+DWFNILVLHQNRVKANPKNAINEHFLPR
Sbjct: 185 GNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFNILVLHQNRVKANPKNAINEHFLPR 244

Query: 726 FLDFIVWGHEHECLVDPQEVPGMGFHITQ 812
           FLDFIVWGHEHECLVDP EVPGMGFHITQ
Sbjct: 245 FLDFIVWGHEHECLVDPLEVPGMGFHITQ 273


>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score =  520 bits (1340), Expect = e-145
 Identities = 248/270 (91%), Positives = 261/270 (96%)
 Frame = +3

Query: 3   ATRDDTSDTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIADQKQVDFLLLGGDLFH 182
           ++R+D S+TLRVLVATDCHLGYMEKDE+RR DSFQAFEEICSIADQKQVDFLLLGGDLFH
Sbjct: 4   SSREDASNTLRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIADQKQVDFLLLGGDLFH 63

Query: 183 ENKPSRSTLVKTIEILRRYCLNDKPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFS 362
           ENKPSRSTLVKTIEILRRY LND+PVQF+VVSDQTVNFAN FGHVNYEDPHFNVGLPVFS
Sbjct: 64  ENKPSRSTLVKTIEILRRYTLNDRPVQFEVVSDQTVNFANIFGHVNYEDPHFNVGLPVFS 123

Query: 363 IHGNHDDPAGVDNLSAIDILSACNLVNYFGKMGLGGSGVGQITICPILIRKGSTSVALYG 542
           IHGNHDDPAGVDNLSA+DILSACNLVNYFGKM LGGSGVGQIT+ PILIRKGST VALYG
Sbjct: 124 IHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLYPILIRKGSTLVALYG 183

Query: 543 LGNIRDERLNRMFQTPHAVQWMRPEAEEGCEVSDWFNILVLHQNRVKANPKNAINEHFLP 722
           LGNIRDERLNRMFQTPHAVQWM+PEA+EGC+VSDWFNILVLHQNRVK NPKNAI+EHFLP
Sbjct: 184 LGNIRDERLNRMFQTPHAVQWMQPEAQEGCQVSDWFNILVLHQNRVKTNPKNAISEHFLP 243

Query: 723 RFLDFIVWGHEHECLVDPQEVPGMGFHITQ 812
           RFLDFIVWGHEHECLVDPQEV GMGFHITQ
Sbjct: 244 RFLDFIVWGHEHECLVDPQEVAGMGFHITQ 273


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  520 bits (1340), Expect = e-145
 Identities = 243/267 (91%), Positives = 259/267 (97%)
 Frame = +3

Query: 12  DDTSDTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIADQKQVDFLLLGGDLFHENK 191
           +D S+ LR+LVATDCHLGYMEKDE+RR DSFQAFEEICSIA+QKQVDFLLLGGDLFHENK
Sbjct: 7   EDISNMLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEQKQVDFLLLGGDLFHENK 66

Query: 192 PSRSTLVKTIEILRRYCLNDKPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHG 371
           PSRSTLVK IEILRR+CLND+PVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHG
Sbjct: 67  PSRSTLVKAIEILRRHCLNDRPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSIHG 126

Query: 372 NHDDPAGVDNLSAIDILSACNLVNYFGKMGLGGSGVGQITICPILIRKGSTSVALYGLGN 551
           NHDDPAGVDNLSA+DILSACNLVNYFGKM L GSGVGQIT+ PIL+RKGST+VALYGLGN
Sbjct: 127 NHDDPAGVDNLSAVDILSACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVALYGLGN 186

Query: 552 IRDERLNRMFQTPHAVQWMRPEAEEGCEVSDWFNILVLHQNRVKANPKNAINEHFLPRFL 731
           IRDERLNRMFQTPHAVQWMRPE++EGCE+SDWFNILVLHQNRVK NPKNAINEHFLPRF+
Sbjct: 187 IRDERLNRMFQTPHAVQWMRPESQEGCELSDWFNILVLHQNRVKTNPKNAINEHFLPRFM 246

Query: 732 DFIVWGHEHECLVDPQEVPGMGFHITQ 812
           DFIVWGHEHECL+DPQEVPGMGFHITQ
Sbjct: 247 DFIVWGHEHECLIDPQEVPGMGFHITQ 273


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  517 bits (1332), Expect = e-144
 Identities = 244/269 (90%), Positives = 258/269 (95%)
 Frame = +3

Query: 6   TRDDTSDTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIADQKQVDFLLLGGDLFHE 185
           +RDD + TLR+LVATDCHLGYMEKDE+RR DSFQAFEE CSIA+QK+VDFLLLGGDLFHE
Sbjct: 5   SRDDDASTLRILVATDCHLGYMEKDEVRRHDSFQAFEETCSIAEQKKVDFLLLGGDLFHE 64

Query: 186 NKPSRSTLVKTIEILRRYCLNDKPVQFQVVSDQTVNFANRFGHVNYEDPHFNVGLPVFSI 365
           NKPSRSTLVK IEILRR+CLND+PVQFQVVSDQTVNFAN FGHVNYEDPHFNVGLPVFSI
Sbjct: 65  NKPSRSTLVKAIEILRRHCLNDQPVQFQVVSDQTVNFANVFGHVNYEDPHFNVGLPVFSI 124

Query: 366 HGNHDDPAGVDNLSAIDILSACNLVNYFGKMGLGGSGVGQITICPILIRKGSTSVALYGL 545
           HGNHDDPAGVDNLSA+DILSACNLVNYFGKM L GSGVGQIT+ PIL+RKGST+VALYGL
Sbjct: 125 HGNHDDPAGVDNLSAVDILSACNLVNYFGKMALEGSGVGQITLYPILVRKGSTAVALYGL 184

Query: 546 GNIRDERLNRMFQTPHAVQWMRPEAEEGCEVSDWFNILVLHQNRVKANPKNAINEHFLPR 725
           GNIRDERLNRMFQTPHAVQWMRPEA+EGC VSDWFN+LVLHQNRVK NPKNAINEHFLPR
Sbjct: 185 GNIRDERLNRMFQTPHAVQWMRPEAQEGCLVSDWFNMLVLHQNRVKTNPKNAINEHFLPR 244

Query: 726 FLDFIVWGHEHECLVDPQEVPGMGFHITQ 812
           FLDFIVWGHEHECLVDPQEVPGMGFHITQ
Sbjct: 245 FLDFIVWGHEHECLVDPQEVPGMGFHITQ 273


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
           MRE11-like [Cucumis sativus]
          Length = 747

 Score =  516 bits (1330), Expect = e-144
 Identities = 247/278 (88%), Positives = 261/278 (93%), Gaps = 9/278 (3%)
 Frame = +3

Query: 6   TRDDTSDTLRVLVATDCHLGYMEKDEIRRVDSFQAFEEICSIADQKQV---------DFL 158
           +R++  +TLRVLVATDCHLGY+EKDEIRR DSF+AFEEICSIA+QKQV         DFL
Sbjct: 5   SREEMKNTLRVLVATDCHLGYLEKDEIRRHDSFKAFEEICSIAEQKQVKXHXXXXXXDFL 64

Query: 159 LLGGDLFHENKPSRSTLVKTIEILRRYCLNDKPVQFQVVSDQTVNFANRFGHVNYEDPHF 338
           LLGGDLFHENKPSRSTLVK IEILRR+CLNDKPVQFQVVSDQT+NF N FGHVNYEDPHF
Sbjct: 65  LLGGDLFHENKPSRSTLVKAIEILRRHCLNDKPVQFQVVSDQTINFPNTFGHVNYEDPHF 124

Query: 339 NVGLPVFSIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMGLGGSGVGQITICPILIRKG 518
           NVGLPVFSIHGNHDDPAGVDNLSA+DILSACNLVNYFGKM LGGSGVGQIT+CPILIRKG
Sbjct: 125 NVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLCPILIRKG 184

Query: 519 STSVALYGLGNIRDERLNRMFQTPHAVQWMRPEAEEGCEVSDWFNILVLHQNRVKANPKN 698
           STSVALYGLGNIRDERLNRMFQTPHAVQWMRPEA+EGC+V+DWFNILVLHQNRVKANPKN
Sbjct: 185 STSVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEGCQVTDWFNILVLHQNRVKANPKN 244

Query: 699 AINEHFLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQ 812
           AINEHFLPRFLDFIVWGHEHECLVDP EVPGMGFHITQ
Sbjct: 245 AINEHFLPRFLDFIVWGHEHECLVDPLEVPGMGFHITQ 282


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