BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004137
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   493   e-137
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   457   e-126
ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|2...   440   e-121
ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   418   e-114
ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   414   e-113

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis vinifera]
            gi|296090438|emb|CBI40257.3| unnamed protein product
            [Vitis vinifera]
          Length = 476

 Score =  493 bits (1268), Expect = e-137
 Identities = 242/345 (70%), Positives = 291/345 (84%), Gaps = 2/345 (0%)
 Frame = +3

Query: 27   SQPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSEDEISYIQSLELHKDP 206
            +Q HRLKRV+AKD M+LGD+I+LP++V+E       +KH + C+++EI+++ +LEL+KDP
Sbjct: 136  NQEHRLKRVAAKDLMNLGDQILLPITVEEFPS----EKHEYHCNDEEINFVHNLELYKDP 191

Query: 207  AIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRLDRDSSGILVLGRTQT 386
            AIIV+NKPPG+PVQGG GIK SLDELAA  L+YD  +PPRLVHRLDRDSSGIL++GRTQT
Sbjct: 192  AIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVHRLDRDSSGILIMGRTQT 251

Query: 387  SATVLHSIFREKTFGASSGDIENTKRILQRTYWALVIGTPRRSSGLISAPLGKVVLDNGK 566
            SAT+LHSIFREKTFGAS+ DI+  KRILQR YWALVIG+PRR  GLISAPLGKVV+D+GK
Sbjct: 252  SATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLISAPLGKVVVDDGK 311

Query: 567  SEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKHQLRVHCAQVLGTPIV 746
            SE+ITIVD+ QTMS QHA+TEYRVI++S  GYTWLEL PLTGRKHQLRVHCA+VLGTPIV
Sbjct: 312  SERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLRVHCAEVLGTPIV 371

Query: 747  GDYKYGWQVHRKWRPIPWSNPVES--EKLPEINILPFGLDSQSGSILEKRPHLHLHCKRM 920
            GDYKYGWQ HRKW+ +  SN  ++  E L      PFGLD +SGSIL+K+PHLHLHCK+M
Sbjct: 372  GDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQM 431

Query: 921  VLPDVSLALECMQSFEDHDLSQLHSLNLVAPLPSHMQRSWDILKS 1055
            VLP+VSLAL+ +Q   + DLS+L SL  VAPLPSHMQRSWDIL S
Sbjct: 432  VLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILNS 476


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 536

 Score =  457 bits (1177), Expect = e-126
 Identities = 226/346 (65%), Positives = 275/346 (79%), Gaps = 2/346 (0%)
 Frame = +3

Query: 24   GSQPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSEDEISYIQSLELHKD 203
            G   H+ KRV+AKD M++GD+I LP+SV    +    +K    C E E ++I+ LEL+KD
Sbjct: 196  GEMEHKTKRVAAKDLMNVGDRIFLPISV----QALPFEKQKCHCGEKEANFIRGLELYKD 251

Query: 204  PAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRLDRDSSGILVLGRTQ 383
             AIIV+NKPPGMPVQGG GIK+S DELAA  L YDY +PPRLVHRLDRDSSGILV+GRTQ
Sbjct: 252  EAIIVVNKPPGMPVQGGIGIKSSFDELAASCLSYDYSEPPRLVHRLDRDSSGILVMGRTQ 311

Query: 384  TSATVLHSIFREKTFGASSGDIENTKRILQRTYWALVIGTPRRSSGLISAPLGKVVLDNG 563
            TS  VLHS+FREKTF AS+ DI   +RILQR YWALVIG+PRR  G+ISAPLGKVV+D+G
Sbjct: 312  TSTMVLHSVFREKTFAASNHDIGERRRILQRKYWALVIGSPRRQKGIISAPLGKVVVDDG 371

Query: 564  KSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKHQLRVHCAQVLGTPI 743
            KS++IT+V++A++ S QHAVT+YRV+E+SH GY WLEL P+TGRKHQLRVHCA+VLGTPI
Sbjct: 372  KSDRITVVENAESTSFQHAVTQYRVMESSH-GYAWLELSPITGRKHQLRVHCAEVLGTPI 430

Query: 744  VGDYKYGWQVHRKWRPIPWSN--PVESEKLPEINILPFGLDSQSGSILEKRPHLHLHCKR 917
            VGDYKYGWQVHRKW+ +P+ N   + +E      ILPFG+D +SGSI EK P LHLHCK+
Sbjct: 431  VGDYKYGWQVHRKWKQLPFPNLEKISNENALCKKILPFGIDLESGSISEKHPRLHLHCKQ 490

Query: 918  MVLPDVSLALECMQSFEDHDLSQLHSLNLVAPLPSHMQRSWDILKS 1055
            MVLPDVS AL  +Q+  ++D S L S+ L APLPS+MQRSWDIL S
Sbjct: 491  MVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQRSWDILNS 536


>ref|XP_002313876.1| predicted protein [Populus trichocarpa] gi|222850284|gb|EEE87831.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  440 bits (1132), Expect = e-121
 Identities = 219/329 (66%), Positives = 262/329 (79%), Gaps = 2/329 (0%)
 Frame = +3

Query: 69   MSLGDKIVLPLSVKENQEVEQLQKHGFRCSEDEISYIQSLELHKDPAIIVINKPPGMPVQ 248
            M +GD+I LP+SVK    V   +K    C+E+EI++I+ LEL+KD AIIV+NKPPGMPVQ
Sbjct: 1    MDVGDRIFLPISVK----VLPAEKQDCHCNEEEINFIRGLELYKDAAIIVVNKPPGMPVQ 56

Query: 249  GGTGIKNSLDELAAISLKYDYKDPPRLVHRLDRDSSGILVLGRTQTSATVLHSIFREKTF 428
            GG GIK SLDEL+A     DY +PPRLVHRLDRD SGILV+GRTQTSATVLH+IFREKT 
Sbjct: 57   GGIGIKRSLDELSASCFSSDYSEPPRLVHRLDRDCSGILVMGRTQTSATVLHAIFREKTL 116

Query: 429  GASSGDIENTKRILQRTYWALVIGTPRRSSGLISAPLGKVVLDNGKSEQITIVDDAQTMS 608
             AS+ D+ N +RILQR YWALVIG+PRR  GLISAPLGKVV+DNGKS++IT+V+++Q +S
Sbjct: 117  AASNDDVGNKRRILQRKYWALVIGSPRRPKGLISAPLGKVVVDNGKSDRITVVENSQNLS 176

Query: 609  CQHAVTEYRVIETSHQGYTWLELRPLTGRKHQLRVHCAQVLGTPIVGDYKYGWQVHRKWR 788
             QHAVT+YRVIE+SH G+TWLEL PLTGRKHQLRVHCA+VLGTPIVGDYKY WQ HR W+
Sbjct: 177  SQHAVTQYRVIESSH-GFTWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWK 235

Query: 789  PIPWSNPVE--SEKLPEINILPFGLDSQSGSILEKRPHLHLHCKRMVLPDVSLALECMQS 962
             + WSN  +  ++K     ILPF LD  SGSI EK P LHLHCK+MVLPDVS AL+ +Q 
Sbjct: 236  QLQWSNIEDNSNDKSLSEKILPFALDLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQL 295

Query: 963  FEDHDLSQLHSLNLVAPLPSHMQRSWDIL 1049
              D+D SQL SL   APLP +M++SWDIL
Sbjct: 296  SSDYDFSQLASLKFDAPLPPYMKKSWDIL 324


>ref|XP_004137095.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cucumis
            sativus]
          Length = 466

 Score =  418 bits (1074), Expect = e-114
 Identities = 210/346 (60%), Positives = 268/346 (77%), Gaps = 2/346 (0%)
 Frame = +3

Query: 24   GSQPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSEDEISYIQSLELHKD 203
            G+  H+LKRV+AKD +++GD+I LP+SV    +V   +K    C+++E +++ SL LHKD
Sbjct: 131  GNSHHQLKRVAAKDILNVGDQIFLPMSV----QVFSTEKTRDYCNKEEETFMHSLVLHKD 186

Query: 204  PAIIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRLDRDSSGILVLGRTQ 383
            PAI+VINKPPG+PVQGG G+K SLDELAA  L Y Y +PPRLVHRLDRDSSGIL++GRT 
Sbjct: 187  PAILVINKPPGLPVQGGIGVKRSLDELAASCLSYGYSEPPRLVHRLDRDSSGILIMGRTS 246

Query: 384  TSATVLHSIFREKTFGAS--SGDIENTKRILQRTYWALVIGTPRRSSGLISAPLGKVVLD 557
            TS ++LHS+FREKTF AS  +  +++ K+IL + YWALVIG+PRRS GLI+APLGK+VLD
Sbjct: 247  TSTSLLHSVFREKTFEASKHANHVDSEKKILLKRYWALVIGSPRRSKGLITAPLGKIVLD 306

Query: 558  NGKSEQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKHQLRVHCAQVLGT 737
            +G+SEQI ++D+A+ M  Q A+T+Y+VI+ SH GYTWLEL PLTGRKHQLRVHCA+VLGT
Sbjct: 307  DGRSEQIMVIDNAEPMPFQQAITQYKVIK-SHHGYTWLELCPLTGRKHQLRVHCAEVLGT 365

Query: 738  PIVGDYKYGWQVHRKWRPIPWSNPVESEKLPEINILPFGLDSQSGSILEKRPHLHLHCKR 917
            PIVGDYKYGWQ H+ W+P   SN  +++   +   LPFGLD +SGSI E  P LHLHCK+
Sbjct: 366  PIVGDYKYGWQAHKNWKPF-CSNFHKNQGKKQ--FLPFGLDFESGSIAENNPRLHLHCKQ 422

Query: 918  MVLPDVSLALECMQSFEDHDLSQLHSLNLVAPLPSHMQRSWDILKS 1055
            + LPDVS AL       D D S+L  L L APLPS+MQ+SWDI+ S
Sbjct: 423  LTLPDVSFALH--NDSLDRDCSRLECLELDAPLPSYMQKSWDIINS 466


>ref|XP_003516775.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Glycine
            max]
          Length = 427

 Score =  414 bits (1065), Expect = e-113
 Identities = 214/340 (62%), Positives = 255/340 (75%), Gaps = 1/340 (0%)
 Frame = +3

Query: 30   QPHRLKRVSAKDEMSLGDKIVLPLSVKENQEVEQLQKHGFRCSEDEISYIQSLELHKDPA 209
            Q    KRV+AKD ++ GD+I+LP SVK    V+Q   H    +  +I++I++L ++KDPA
Sbjct: 91   QQQTFKRVAAKDTLNTGDRILLPQSVK----VKQTPTHS-HLTPQQINFIRTLVIYKDPA 145

Query: 210  IIVINKPPGMPVQGGTGIKNSLDELAAISLKYDYKDPPRLVHRLDRDSSGILVLGRTQTS 389
            I+V+NKPPGMPVQGG  IK SLD +AA SL Y Y  PPRLVHRLDRD SGILV+GRT TS
Sbjct: 146  ILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQPPRLVHRLDRDCSGILVMGRTHTS 205

Query: 390  ATVLHSIFREKTFGASSGDIENTKRILQRTYWALVIGTPRRSSGLISAPLGKVVLDNGKS 569
             TVLHSIFREKT  AS  DI   KRILQR YWALV+G PRR  GL++A LGKVV+DNG+S
Sbjct: 206  TTVLHSIFREKTSRASD-DIGKEKRILQRRYWALVLGCPRRPKGLVTASLGKVVVDNGRS 264

Query: 570  EQITIVDDAQTMSCQHAVTEYRVIETSHQGYTWLELRPLTGRKHQLRVHCAQVLGTPIVG 749
            ++ITIVD++  MS QHA+TEYRVI +S QGYTWLEL PLTGRKHQLRVHCA+VLGTPIVG
Sbjct: 265  DRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTPLTGRKHQLRVHCAEVLGTPIVG 324

Query: 750  DYKYGWQVHRKWRPIPWSNPVES-EKLPEINILPFGLDSQSGSILEKRPHLHLHCKRMVL 926
            DYKYGWQ HRKW      N  +S E+L     LPFGL+   GSI E  P LHLHCK+MVL
Sbjct: 325  DYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLNLNKGSISENHPRLHLHCKQMVL 384

Query: 927  PDVSLALECMQSFEDHDLSQLHSLNLVAPLPSHMQRSWDI 1046
            P++S AL+ +QS    DLS +  L LVA LP +MQRSWD+
Sbjct: 385  PNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSWDV 424