BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00004071
         (1693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   433   e-165
ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|2...   403   e-157
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   402   e-157
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      401   e-157
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   390   e-155

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  433 bits (1114), Expect(2) = e-165
 Identities = 228/409 (55%), Positives = 282/409 (68%), Gaps = 18/409 (4%)
 Frame = +3

Query: 132  MSLSRNSISNNTATPNAGTKAKTLNPNAAEFVPSSLRYTPGSTNAGEVSTRADSSATSGK 311
            MSLS+     N    ++  K  TLNPNAAEFVP +LR + GST+ G+ S R   S T GK
Sbjct: 1    MSLSKKGNPINNIKLDSTAKVTTLNPNAAEFVPFALRSSSGSTSTGDASARFTPSGTLGK 60

Query: 312  TVLDRXXXXXXXXXXXXAHQYWRQHLPDDITPDFKFMEENESQGTGSLLFERLSINDLGE 491
              LDR            AHQYWR  LPDDITPDFK M E+ESQ  G L    LS++D  E
Sbjct: 61   AKLDRSESSISNNSDEEAHQYWRCQLPDDITPDFKVMGEDESQALGGLSLAGLSLHDSTE 120

Query: 492  NFSFAAPTG--------------GQNNVVGKLRYSATPYVADQSSAAFVDLPSNPWEKQF 629
               F+A +G                N+   K+RYSA+PY  D SSA F+ LP+ PW+KQ 
Sbjct: 121  TSRFSAGSGYILNEQQELSPHHVNGNSFTDKMRYSASPYGEDPSSATFLHLPNKPWDKQI 180

Query: 630  ANADQLLSNGSEGFPFNGNAGTEYINDVLNEHAISEDSEINSVEFLVSQFPGFAAESLAE 809
             + DQLLSNG EG P+NGN+   ++ND+LNEHA+ +++++N +EFL  QFPGFAAESL E
Sbjct: 181  VHGDQLLSNGREGTPYNGNSRHGFVNDMLNEHAMVDETDMNPLEFLALQFPGFAAESLTE 240

Query: 810  VYYANGCDLNLTIEMLTQLELQVESGFNQNVNSKTLSAPNLSALDFPALSESDGQNGLEK 989
            VY+AN CDLN+TIEMLTQLELQV+ GF+QN+NSKTLSAPNLS LDFP+L   DGQNGL K
Sbjct: 241  VYFANECDLNMTIEMLTQLELQVDGGFSQNMNSKTLSAPNLSGLDFPSLPVPDGQNGLPK 300

Query: 990  YA-EDLQHSTSPYRSADKDNLFLFKTGFSAQTRGATDFASAVKKPAPHNSG---YERYGS 1157
            YA +D+Q   +PYRS+DKDNL +FK+  S  +RGATDFASAV+K A  +SG   ++R G+
Sbjct: 301  YAGDDIQQGVNPYRSSDKDNLLMFKSNSSIPSRGATDFASAVRKLATQDSGIWKFDRNGT 360

Query: 1158 ANPSVGSSRSSQILASSYGGGQGRATYGDKSQNYVSARGAPVWLETGEA 1304
            A+ +VGSSRSS +LASSY  G GR TYGD+ QN  SAR AP W+ETGEA
Sbjct: 361  ADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEA 409



 Score =  177 bits (448), Expect(2) = e-165
 Identities = 92/114 (80%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
 Frame = +2

Query: 1355 NMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQEA 1534
            NMYSE REEARDHARLRNAYFEQA+QAYLIGNKALAKELS+KG+L+++HMKAAHGKAQEA
Sbjct: 412  NMYSELREEARDHARLRNAYFEQAQQAYLIGNKALAKELSLKGKLHSIHMKAAHGKAQEA 471

Query: 1535 IYRQRNN-AHEVQGYGRGQERMIDLHGLHVSEAIHRLRNELSVLRNAARSTDQR 1693
            IYRQRN  + E+QG  RG ERMIDLHGLHVSEAIH L++EL+VLR+ ARS DQR
Sbjct: 472  IYRQRNPVSPELQGNARG-ERMIDLHGLHVSEAIHVLKHELNVLRSTARSADQR 524


>ref|XP_002324203.1| predicted protein [Populus trichocarpa] gi|222865637|gb|EEF02768.1|
            predicted protein [Populus trichocarpa]
          Length = 583

 Score =  403 bits (1035), Expect(2) = e-157
 Identities = 224/416 (53%), Positives = 284/416 (68%), Gaps = 25/416 (6%)
 Frame = +3

Query: 132  MSLSRNSISNNTATPNAGTKAKTLNPNAAEFVPSSLRYTP---GST-NAGEVSTRADSSA 299
            M+LS+     N    +   KA TLNPNAAEFVP SLR +    GST N  + +T+  +S 
Sbjct: 1    MNLSKKGSLTNDTKLSLPNKATTLNPNAAEFVPFSLRSSSSPSGSTSNTTDAATKLATSG 60

Query: 300  TSGKTVLDRXXXXXXXXXXXXAHQYWRQHLPDDITPDFKFMEENESQGTGSLLFERLSIN 479
            T GK+VLDR            AHQ+WR  LPDDITPDFK M E+ESQG G L    LS++
Sbjct: 61   TVGKSVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMNEDESQGLGGLSLAGLSLH 120

Query: 480  DLGE--NFSFAAPTG---------GQNNVVGK-----LRYSATPYVADQSSAAFVDLPSN 611
            D  E   F  ++ +G           +++ G      +RY+   Y  D +SA+F++LP+ 
Sbjct: 121  DSSEVPRFHASSRSGYVLTEQQEPSPHHINGSSFSENMRYAVASYGEDPTSASFLNLPTK 180

Query: 612  PWEKQFANADQLLSNGSEGFPFNGNAGTEYINDVLNEHAISEDSEINSVEFLVSQFPGFA 791
            PW+KQ AN+DQLLSNG E  P+NGN+   + +++L EHAI +D+EIN +EFL SQFPGFA
Sbjct: 181  PWDKQIANSDQLLSNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLEFLASQFPGFA 240

Query: 792  AESLAEVYYANGCDLNLTIEMLTQLELQVESGFNQNVNSKTLSAP-NLSALDFPALSESD 968
            AESLAEVY+AN CDLNLTIEMLTQLELQV+ GFNQ  NSKT+SAP NLSALDFPAL+  D
Sbjct: 241  AESLAEVYFANACDLNLTIEMLTQLELQVDGGFNQTTNSKTVSAPTNLSALDFPALTVPD 300

Query: 969  GQNGLEKYA-EDLQHSTSPYRSADKDNLFLFKTGFSAQTRGATDFASAVKKPAPHNS--- 1136
             QNG  KYA +DLQ +  PYRS++KDN+ +FK+G S  +RGA DFASAV+K A  +S   
Sbjct: 301  NQNGPSKYAGDDLQQAGIPYRSSNKDNMLVFKSGASFSSRGAVDFASAVRKLASQDSSMW 360

Query: 1137 GYERYGSANPSVGSSRSSQILASSYGGGQGRATYGDKSQNYVSARGAPVWLETGEA 1304
             ++R GSA+ +VGSSRSS +LAS+Y GG GR  Y D+SQ+  S + APVWLETGEA
Sbjct: 361  NHDRNGSADSTVGSSRSSHVLASAYSGGHGRGIYADRSQSRGSGQAAPVWLETGEA 416



 Score =  182 bits (461), Expect(2) = e-157
 Identities = 91/114 (79%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = +2

Query: 1355 NMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQEA 1534
            +MYSE REEARDHAR+RNAY EQARQAYLIGNKALAKELS KGQL+NMHMK AHGKAQE+
Sbjct: 419  SMYSEMREEARDHARIRNAYLEQARQAYLIGNKALAKELSAKGQLHNMHMKEAHGKAQES 478

Query: 1535 IYRQRNNAH-EVQGYGRGQERMIDLHGLHVSEAIHRLRNELSVLRNAARSTDQR 1693
            IYRQRN A  E+QG GRG ERMIDLHGLHV+EAIH L++ELS+LR+ AR+ DQR
Sbjct: 479  IYRQRNPASLEMQGTGRGHERMIDLHGLHVTEAIHVLKHELSILRSTARAADQR 532


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
            predicted protein [Populus trichocarpa]
          Length = 581

 Score =  402 bits (1033), Expect(2) = e-157
 Identities = 221/414 (53%), Positives = 275/414 (66%), Gaps = 23/414 (5%)
 Frame = +3

Query: 132  MSLSRNSISNNTATPNAGTKAKTLNPNAAEFVPSSLRYTP---GST-NAGEVSTRADSSA 299
            MSLS+     N    N  +KA TLNPNAAEFVP SLR +    GST N+ + +T+  +S 
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 300  TSGKTVLDRXXXXXXXXXXXXAHQYWRQHLPDDITPDFKFMEENESQGTGSLLFERLSIN 479
            T GK VLDR            AHQ+WR  LPDDITPDFK M ++ESQG G L    LS++
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 480  DLGENFSFAAPTGGQ---------------NNVVGKLRYSATPYVADQSSAAFVDLPSNP 614
            D       A+   G                ++   K+RY +  Y  D SSA+F++LP+ P
Sbjct: 121  DSEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTKP 180

Query: 615  WEKQFANADQLLSNGSEGFPFNGNAGTEYINDVLNEHAISEDSEINSVEFLVSQFPGFAA 794
            W+KQ AN D LL NG E  P+NGN+   + +++L EHAI +D+EIN + FL SQFPGFA 
Sbjct: 181  WDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFAT 240

Query: 795  ESLAEVYYANGCDLNLTIEMLTQLELQVESGFNQNVNSKTLSAPNLSALDFPALSESDGQ 974
            ESLAEVY+A+GCDLNLT+EMLTQLELQV+  FNQN NSKTLSAPNLSALDFPAL+  D Q
Sbjct: 241  ESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDNQ 300

Query: 975  NGLEKY-AEDLQHSTSPYRSADKDNLFLFKTGFSAQTRGATDFASAVKKPAPHNSG---Y 1142
            NG  KY  +DLQ ++ PYRS++KDN+ LFK G S  +RGA DFASAV+K A  +S    +
Sbjct: 301  NGSSKYTGDDLQQASVPYRSSNKDNMLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWKH 360

Query: 1143 ERYGSANPSVGSSRSSQILASSYGGGQGRATYGDKSQNYVSARGAPVWLETGEA 1304
            +R GSA+ +VGSSRSS +L S+YGGG GR  Y D+ Q+  S R APVWLETGEA
Sbjct: 361  DRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEA 414



 Score =  182 bits (462), Expect(2) = e-157
 Identities = 92/114 (80%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = +2

Query: 1355 NMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQEA 1534
            NMYSE REEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQL+NMHMK AHGKAQE+
Sbjct: 417  NMYSEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQES 476

Query: 1535 IYRQRNNAH-EVQGYGRGQERMIDLHGLHVSEAIHRLRNELSVLRNAARSTDQR 1693
            IY QRN    E+QG GRG E+MIDLHGLHV+EAIH L++ELSVLR+ A++ DQR
Sbjct: 477  IYHQRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQR 530


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  401 bits (1030), Expect(2) = e-157
 Identities = 221/414 (53%), Positives = 274/414 (66%), Gaps = 23/414 (5%)
 Frame = +3

Query: 132  MSLSRNSISNNTATPNAGTKAKTLNPNAAEFVPSSLRYTP---GST-NAGEVSTRADSSA 299
            MSLS+     N    N  +KA TLNPNAAEFVP SLR +    GST N+ + +T+  +S 
Sbjct: 1    MSLSKKGSLTNDTKLNLPSKATTLNPNAAEFVPFSLRSSSSPSGSTSNSADAATKFTTSG 60

Query: 300  TSGKTVLDRXXXXXXXXXXXXAHQYWRQHLPDDITPDFKFMEENESQGTGSLLFERLSIN 479
            T GK VLDR            AHQ+WR  LPDDITPDFK M ++ESQG G L    LS++
Sbjct: 61   TVGKAVLDRSESSVSNASDDEAHQFWRHQLPDDITPDFKVMSDDESQGLGGLSLAGLSLH 120

Query: 480  DLGENFSFAAPTGGQ---------------NNVVGKLRYSATPYVADQSSAAFVDLPSNP 614
            D       A+   G                ++   K+RY +  Y  D SSA+F++LP+ P
Sbjct: 121  DSEVPRFHASSRSGYVLTEQQEPSPRHMNGSSFGEKMRYPSASYGEDPSSASFLNLPTKP 180

Query: 615  WEKQFANADQLLSNGSEGFPFNGNAGTEYINDVLNEHAISEDSEINSVEFLVSQFPGFAA 794
            W+KQ AN D LL NG E  P+NGN+   + +++L EHAI +D+EIN + FL SQFPGFA 
Sbjct: 181  WDKQIANGDHLLGNGREVHPYNGNSRHGFRSEILGEHAIVDDTEINPLGFLASQFPGFAT 240

Query: 795  ESLAEVYYANGCDLNLTIEMLTQLELQVESGFNQNVNSKTLSAPNLSALDFPALSESDGQ 974
            ESLAEVY+A+GCDLNLT+EMLTQLELQV+  FNQN NSKTLSAPNLSALDFPAL+  D Q
Sbjct: 241  ESLAEVYFASGCDLNLTVEMLTQLELQVDGSFNQNTNSKTLSAPNLSALDFPALTVLDNQ 300

Query: 975  NGLEKY-AEDLQHSTSPYRSADKDNLFLFKTGFSAQTRGATDFASAVKKPAPHNSG---Y 1142
            NG  KY  +DLQ ++ PYRS++KDN  LFK G S  +RGA DFASAV+K A  +S    +
Sbjct: 301  NGSSKYTGDDLQQASVPYRSSNKDNTLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWKH 360

Query: 1143 ERYGSANPSVGSSRSSQILASSYGGGQGRATYGDKSQNYVSARGAPVWLETGEA 1304
            +R GSA+ +VGSSRSS +L S+YGGG GR  Y D+ Q+  S R APVWLETGEA
Sbjct: 361  DRNGSADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEA 414



 Score =  182 bits (462), Expect(2) = e-157
 Identities = 92/114 (80%), Positives = 102/114 (89%), Gaps = 1/114 (0%)
 Frame = +2

Query: 1355 NMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQEA 1534
            NMYSE REEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQL+NMHMK AHGKAQE+
Sbjct: 417  NMYSEMREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKEAHGKAQES 476

Query: 1535 IYRQRNNAH-EVQGYGRGQERMIDLHGLHVSEAIHRLRNELSVLRNAARSTDQR 1693
            IY QRN    E+QG GRG E+MIDLHGLHV+EAIH L++ELSVLR+ A++ DQR
Sbjct: 477  IYHQRNPVSLEMQGTGRGHEQMIDLHGLHVTEAIHVLKHELSVLRSTAQAADQR 530


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  390 bits (1002), Expect(2) = e-155
 Identities = 221/417 (52%), Positives = 271/417 (64%), Gaps = 26/417 (6%)
 Frame = +3

Query: 132  MSLSRNSISNNTATPNAGTKAKTLNPNAAEFVPSSLRYTP---GST-NAGEVSTRADSSA 299
            MSLS+     NT   N  +KA  LNPNAAEFVP SLR      GST NA   + R  +S 
Sbjct: 1    MSLSKKGSQTNTTKLNIPSKATALNPNAAEFVPFSLRSLSSPSGSTSNAAATTARFATSG 60

Query: 300  TSGKTVLDRXXXXXXXXXXXXAHQYWRQHLPDDITPDFKFMEENESQGTGSLLFERLSIN 479
              GK VLDR            AHQ+WR  LPDDITPDFK M E+ESQ  G L    LS++
Sbjct: 61   PVGKAVLDRSESSISTTSDEEAHQFWRHQLPDDITPDFKVMGEDESQSLGGLSLAGLSLH 120

Query: 480  DLGENFSFAAPTGGQ----------------NNVVGKLRYSATPYVADQSSAA-FVDLPS 608
            D  E   F A  G                  ++   K+RY+   Y  D +SAA +++LP+
Sbjct: 121  DSSEVPKFPASVGSGYILTEQQEPSPRHINGSSFSEKMRYAIASYGEDPTSAAGYLNLPT 180

Query: 609  NPWEKQFANADQLLSNGSEGFPFNGNAGTEYINDVLNEHAISEDSEINSVEFLVSQFPGF 788
             PW+KQ  N D LL NG E  P+NGN+   ++ND+L E AI ++ ++N ++FL S FPGF
Sbjct: 181  KPWDKQIINNDHLLGNGREVHPYNGNSRRGFMNDMLGEQAIVDEPDMNPLDFLASHFPGF 240

Query: 789  AAESLAEVYYANGCDLNLTIEMLTQLELQVESGFNQNVNSKTLSAPNLSALDFPALSESD 968
            AAESLAEVY+ANG DLNLTIEMLTQLELQV+ GFNQN+NSK LSAPNLSA+DFPAL   D
Sbjct: 241  AAESLAEVYFANGYDLNLTIEMLTQLELQVDGGFNQNMNSKALSAPNLSAMDFPALPVPD 300

Query: 969  GQNGLEKYA-EDLQHSTSPYRSADKDNLFLFKTGFSAQTR-GATDFASAVKKPAPHNSG- 1139
             QN   KY+ +D+Q S +PYRS+DK+N+ LFK+  S  +R GA DFASAV+K A  +SG 
Sbjct: 301  SQNSPSKYSGDDIQQSGNPYRSSDKENILLFKSSSSTPSRGGAIDFASAVRKLASQDSGI 360

Query: 1140 --YERYGSANPSVGSSRSSQILASSYGGGQGRATYGDKSQNYVSARGAPVWLETGEA 1304
              YER GSA+ +VGSSRSS +LASSY  G GR  Y +++QN  SAR APVWLETGEA
Sbjct: 361  WKYERNGSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGEA 417



 Score =  188 bits (477), Expect(2) = e-155
 Identities = 96/114 (84%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
 Frame = +2

Query: 1355 NMYSEFREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMHMKAAHGKAQEA 1534
            NMYSE REEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQL+NMHMKAAHGKAQE+
Sbjct: 420  NMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQES 479

Query: 1535 IYRQRNN-AHEVQGYGRGQERMIDLHGLHVSEAIHRLRNELSVLRNAARSTDQR 1693
            IYR RN  + E+QG GRG ERMIDLHGLHVSEAIH L++ELSVLR+ AR+ DQR
Sbjct: 480  IYRLRNPISSEMQGNGRGHERMIDLHGLHVSEAIHVLKHELSVLRSTARAADQR 533