BLASTX nr result
ID: Aconitum21_contig00001471
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Aconitum21_contig00001471 (398 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense] 93 2e-17 ref|XP_002270166.1| PREDICTED: upstream activation factor subuni... 87 1e-15 ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus c... 87 1e-15 ref|XP_002879559.1| SWIB complex BAF60b domain-containing protei... 86 3e-15 ref|XP_003517103.1| PREDICTED: upstream activation factor subuni... 86 4e-15 >gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense] Length = 148 Score = 93.2 bits (230), Expect = 2e-17 Identities = 59/128 (46%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +3 Query: 18 QNPKTPKVMASSSRVFSG-CRALLAAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194 QNP+ K MASSSR+F CR L+AAA+ Sbjct: 21 QNPR--KTMASSSRIFGNYCRTLMAAAKTSAGKTPPATTTTAAGKG-------------- 64 Query: 195 XXXXXXXXXRSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVI 374 RS GILK PISPAL FVG E+SRT AVKKIW++IKTNNLQ+P NKK I Sbjct: 65 ---------RSKGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEI 115 Query: 375 YCDEKLKT 398 CD+ LKT Sbjct: 116 NCDDMLKT 123 >ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis vinifera] gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera] gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera] Length = 128 Score = 87.4 bits (215), Expect = 1e-15 Identities = 41/59 (69%), Positives = 46/59 (77%) Frame = +3 Query: 222 RSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398 RS GI K VP+SPAL F+G PE SR AVKKIWEHIK NNLQ+P NK+ I CDEKLK+ Sbjct: 45 RSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKS 103 >ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis] gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis] Length = 134 Score = 87.0 bits (214), Expect = 1e-15 Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%) Frame = +3 Query: 222 RSNGILKVVPISPALSDFVGA-PEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398 R+ GILK P+SPALS+F+G PE SRT VKKIW+HIK +NLQ+P NKK I+CDEKLKT Sbjct: 50 RATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKT 109 >ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325398|gb|EFH55818.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 112 Score = 85.9 bits (211), Expect = 3e-15 Identities = 51/119 (42%), Positives = 61/119 (51%) Frame = +3 Query: 42 MASSSRVFSGCRALLAAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221 MA+ SRVF CR L+A A Sbjct: 1 MATVSRVFGACRVLMAKAA--------------------------------SSSAAKNGR 28 Query: 222 RSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398 + GILKVVP+S L+ F+G EVSRT AVKKIWE+IK NNLQ+PENK+ I CDE+LKT Sbjct: 29 QGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKT 87 >ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine max] Length = 132 Score = 85.5 bits (210), Expect = 4e-15 Identities = 39/58 (67%), Positives = 48/58 (82%) Frame = +3 Query: 225 SNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398 ++GI KVVP+S L DF+GAP+VSRT AVKK+W +IK NLQ+P NKK I+CDEKLKT Sbjct: 50 NSGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKT 107