BLASTX nr result

ID: Aconitum21_contig00001471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001471
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]      93   2e-17
ref|XP_002270166.1| PREDICTED: upstream activation factor subuni...    87   1e-15
ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus c...    87   1e-15
ref|XP_002879559.1| SWIB complex BAF60b domain-containing protei...    86   3e-15
ref|XP_003517103.1| PREDICTED: upstream activation factor subuni...    86   4e-15

>gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 148

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 59/128 (46%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +3

Query: 18  QNPKTPKVMASSSRVFSG-CRALLAAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194
           QNP+  K MASSSR+F   CR L+AAA+                                
Sbjct: 21  QNPR--KTMASSSRIFGNYCRTLMAAAKTSAGKTPPATTTTAAGKG-------------- 64

Query: 195 XXXXXXXXXRSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVI 374
                    RS GILK  PISPAL  FVG  E+SRT AVKKIW++IKTNNLQ+P NKK I
Sbjct: 65  ---------RSKGILKPQPISPALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEI 115

Query: 375 YCDEKLKT 398
            CD+ LKT
Sbjct: 116 NCDDMLKT 123


>ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera] gi|147798865|emb|CAN68050.1| hypothetical
           protein VITISV_015104 [Vitis vinifera]
           gi|296090194|emb|CBI40013.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/59 (69%), Positives = 46/59 (77%)
 Frame = +3

Query: 222 RSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398
           RS GI K VP+SPAL  F+G PE SR  AVKKIWEHIK NNLQ+P NK+ I CDEKLK+
Sbjct: 45  RSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREILCDEKLKS 103


>ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223536700|gb|EEF38341.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 134

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
 Frame = +3

Query: 222 RSNGILKVVPISPALSDFVGA-PEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398
           R+ GILK  P+SPALS+F+G  PE SRT  VKKIW+HIK +NLQ+P NKK I+CDEKLKT
Sbjct: 50  RATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDEKLKT 109


>ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325398|gb|EFH55818.1| SWIB complex
           BAF60b domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 112

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/119 (42%), Positives = 61/119 (51%)
 Frame = +3

Query: 42  MASSSRVFSGCRALLAAARVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 221
           MA+ SRVF  CR L+A A                                          
Sbjct: 1   MATVSRVFGACRVLMAKAA--------------------------------SSSAAKNGR 28

Query: 222 RSNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398
           +  GILKVVP+S  L+ F+G  EVSRT AVKKIWE+IK NNLQ+PENK+ I CDE+LKT
Sbjct: 29  QGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQLKT 87


>ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
           max]
          Length = 132

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +3

Query: 225 SNGILKVVPISPALSDFVGAPEVSRTVAVKKIWEHIKTNNLQSPENKKVIYCDEKLKT 398
           ++GI KVVP+S  L DF+GAP+VSRT AVKK+W +IK  NLQ+P NKK I+CDEKLKT
Sbjct: 50  NSGIQKVVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKT 107


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