BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001404
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana...   188   1e-45
dbj|BAJ33842.1| unnamed protein product [Thellungiella halophila]     186   3e-45
ref|XP_002882919.1| hypothetical protein ARALYDRAFT_897793 [Arab...   186   4e-45
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro...   182   8e-44
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro...   181   1e-43

>ref|NP_188137.1| 30S ribosomal protein S20 [Arabidopsis thaliana]
           gi|75308015|sp|Q9ASV6.1|RR20_ARATH RecName: Full=30S
           ribosomal protein S20, chloroplastic; Flags: Precursor
           gi|188036221|pdb|3BBN|T Chain T, Homology Model For The
           Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome.
           gi|13605653|gb|AAK32820.1|AF361807_1 AT3g15190/F4B12_10
           [Arabidopsis thaliana]
           gi|13899121|gb|AAK48982.1|AF370555_1 Unknown protein
           [Arabidopsis thaliana] gi|15777889|gb|AAL05905.1|
           AT3g15190/F4B12_10 [Arabidopsis thaliana]
           gi|18377542|gb|AAL66937.1| unknown protein [Arabidopsis
           thaliana] gi|21592469|gb|AAM64420.1| 30S ribosomal
           protein S20 [Arabidopsis thaliana]
           gi|332642109|gb|AEE75630.1| 30S ribosomal protein S20
           [Arabidopsis thaliana]
          Length = 202

 Score =  188 bits (477), Expect = 1e-45
 Identities = 95/133 (71%), Positives = 112/133 (84%)
 Frame = -3

Query: 598 FSFGGLAMKAPIRGWSVVCEVTAPTKKADSAAKRARQSEKRRVYNKSKKSELKTRMKTVL 419
           FS G L ++ P+R   +VCE  APTKKADSAAKRARQ+EKRRVYNKSKKSE +TRMK VL
Sbjct: 61  FSTGNLWVQKPMRQL-IVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKVL 119

Query: 418 ESLDALQKKTDAQSEEILTIEKLIAEAYSAIDKAVKAGALHRNTAANRKSRLARRKKTVE 239
           E+L+ L+KKTDAQ++EI+T+EKLI EAYSAIDKAVK  ALH+NT A RKSRLARRKK VE
Sbjct: 120 EALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVE 179

Query: 238 IHHGWYTPASSVS 200
           IHHGWY P ++ +
Sbjct: 180 IHHGWYVPDAAAA 192


>dbj|BAJ33842.1| unnamed protein product [Thellungiella halophila]
          Length = 209

 Score =  186 bits (473), Expect = 3e-45
 Identities = 94/133 (70%), Positives = 111/133 (83%)
 Frame = -3

Query: 598 FSFGGLAMKAPIRGWSVVCEVTAPTKKADSAAKRARQSEKRRVYNKSKKSELKTRMKTVL 419
           FS G L ++ P+R   +VCE  APTKKADSAAKRARQ+EKRR+YNKSKKSE +TRMK VL
Sbjct: 68  FSSGNLRVQKPMRQL-IVCEAAAPTKKADSAAKRARQAEKRRLYNKSKKSEARTRMKKVL 126

Query: 418 ESLDALQKKTDAQSEEILTIEKLIAEAYSAIDKAVKAGALHRNTAANRKSRLARRKKTVE 239
           E+L+ L+KK DAQ +EI+T+EKLI EAYSAIDKAVK  ALH+NT A RKSRLARRKK VE
Sbjct: 127 EALEGLKKKADAQPDEIVTVEKLIGEAYSAIDKAVKVRALHKNTGARRKSRLARRKKAVE 186

Query: 238 IHHGWYTPASSVS 200
           IHHGWY P ++V+
Sbjct: 187 IHHGWYVPDTAVA 199


>ref|XP_002882919.1| hypothetical protein ARALYDRAFT_897793 [Arabidopsis lyrata subsp.
           lyrata] gi|297328759|gb|EFH59178.1| hypothetical protein
           ARALYDRAFT_897793 [Arabidopsis lyrata subsp. lyrata]
          Length = 197

 Score =  186 bits (472), Expect = 4e-45
 Identities = 95/133 (71%), Positives = 109/133 (81%)
 Frame = -3

Query: 598 FSFGGLAMKAPIRGWSVVCEVTAPTKKADSAAKRARQSEKRRVYNKSKKSELKTRMKTVL 419
           FS G L ++ P R   +VCE  APTKKADSAAKRARQ+EKRR+YNKSKKSE +TRMK VL
Sbjct: 59  FSSGNLWVQKPTRQL-IVCEAAAPTKKADSAAKRARQAEKRRIYNKSKKSEARTRMKKVL 117

Query: 418 ESLDALQKKTDAQSEEILTIEKLIAEAYSAIDKAVKAGALHRNTAANRKSRLARRKKTVE 239
           E+L+ L+KKTDAQ +EI+T+EKLI EAYSAIDKAVK  ALH+NT A RKSRLARRKK VE
Sbjct: 118 EALEGLKKKTDAQPDEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVE 177

Query: 238 IHHGWYTPASSVS 200
           IHHGWY P +  S
Sbjct: 178 IHHGWYVPDAVAS 190


>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
           sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
           ribosomal protein S20, chloroplastic-like [Cucumis
           sativus]
          Length = 184

 Score =  182 bits (461), Expect = 8e-44
 Identities = 96/134 (71%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
 Frame = -3

Query: 604 TTFSFGGLAMKAPIR--GWSVVCEVTAPTKKADSAAKRARQSEKRRVYNKSKKSELKTRM 431
           + FS G L+M+   R   +SVVCE  AP  K DSAAKRARQ+EKRR+YNK++KSE+KTRM
Sbjct: 48  SAFSNGCLSMRKTERLHRYSVVCEA-APKSKVDSAAKRARQAEKRRIYNKARKSEIKTRM 106

Query: 430 KTVLESLDALQKKTDAQSEEILTIEKLIAEAYSAIDKAVKAGALHRNTAANRKSRLARRK 251
           K VLE+LD L+KK +AQSEE+L IE LIAEAYS IDKAV+AG LHRNTAA RKSRLARRK
Sbjct: 107 KKVLEALDGLKKKAEAQSEEVLPIETLIAEAYSVIDKAVRAGTLHRNTAARRKSRLARRK 166

Query: 250 KTVEIHHGWYTPAS 209
           K VEIHHGWYTP S
Sbjct: 167 KAVEIHHGWYTPDS 180


>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
           vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
           product [Vitis vinifera]
          Length = 183

 Score =  181 bits (460), Expect = 1e-43
 Identities = 96/138 (69%), Positives = 111/138 (80%), Gaps = 3/138 (2%)
 Frame = -3

Query: 604 TTFSFGGLAMKAPIRG---WSVVCEVTAPTKKADSAAKRARQSEKRRVYNKSKKSELKTR 434
           T FS G L++   IRG    S+VC+  AP +KADSAAKR RQ+EKRR+YNK++KSE++TR
Sbjct: 47  TVFSKGRLSIST-IRGPTHHSIVCDA-APMRKADSAAKRVRQAEKRRIYNKARKSEIRTR 104

Query: 433 MKTVLESLDALQKKTDAQSEEILTIEKLIAEAYSAIDKAVKAGALHRNTAANRKSRLARR 254
           MK VLE LD L+KK DAQ+EE+L IEKLIAEAYS IDKAVK G LHRNT A RKSRLARR
Sbjct: 105 MKKVLEELDGLKKKPDAQAEEVLPIEKLIAEAYSVIDKAVKVGTLHRNTGARRKSRLARR 164

Query: 253 KKTVEIHHGWYTPASSVS 200
           KK VEIHHGWYTPA  V+
Sbjct: 165 KKAVEIHHGWYTPAPPVT 182