BLASTX nr result

ID: Aconitum21_contig00001283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001283
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-int...   110   3e-22
gb|AFK45735.1| unknown [Medicago truncatula]                          102   7e-20
ref|XP_003598896.1| Polyadenylate-binding protein-interacting pr...   100   3e-19
gb|AFK42480.1| unknown [Medicago truncatula]                          100   4e-19
gb|ABK96602.1| unknown [Populus trichocarpa x Populus deltoides]       98   2e-18

>ref|XP_002268033.1| PREDICTED: polyadenylate-binding protein-interacting protein 2
           [Vitis vinifera] gi|296081303|emb|CBI17747.3| unnamed
           protein product [Vitis vinifera]
          Length = 172

 Score =  110 bits (275), Expect = 3e-22
 Identities = 64/175 (36%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1   LFIPAVFRQVEDFSPEWWELIKTSTWFRDYWTEQHQKEESCEA--------------YXX 138
           LFIPA FRQVEDFSPEWW+L+KTSTWFRDYW  QHQ +E+ E                  
Sbjct: 17  LFIPAAFRQVEDFSPEWWKLVKTSTWFRDYWLSQHQDDENFEVNDGADDDVLNLLPETFD 76

Query: 139 XXXXXXXXXXXXXXXXXVQYSESNEANESADLTLPVDKTQSXXXXXXXXXXXXXXXXXXX 318
                            +Q SE+ E  ESA     V KT                     
Sbjct: 77  LGIDEESLDLEVQMEELIQLSETKEGTESAS---TVSKTGRKPVNGL------------- 120

Query: 319 XDPEMDIETLLRNQSLSKTSKERGSKSPMASPKQMDKPVKCISPKYSPRRIHQPR 483
              +++ E L++N +L  + K +  K+P+   K  +K  +C+SPKY PRRI+QPR
Sbjct: 121 ---KLETEALMKNLNLGNSPKGKSPKTPVGPAKYHEKAAQCMSPKYGPRRINQPR 172


>gb|AFK45735.1| unknown [Medicago truncatula]
          Length = 169

 Score =  102 bits (254), Expect = 7e-20
 Identities = 62/175 (35%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1   LFIPAVFRQVEDFSPEWWELIKTSTWFRDYWTEQHQKEESCEAYXXXXXXXXXXXXXXXX 180
           LFIPA FRQVEDFSP+WWEL+K+STWF DYW  QH++E+  E+                 
Sbjct: 17  LFIPAAFRQVEDFSPQWWELVKSSTWFHDYWLSQHKEEDFVESGGNDATNDDDIEHMLSE 76

Query: 181 XXXVQYSE--------------SNEANESADLTLPVDKTQSXXXXXXXXXXXXXXXXXXX 318
              +   E              S+EA E   +  PV++ +                    
Sbjct: 77  TFDLGIEEDFNFLDNEFEKLVMSDEAQECPVMDEPVEEKKPVHGV--------------- 121

Query: 319 XDPEMDIETLLRNQSLSKTSKERGSKSPMASPKQMDKPVKCISPKYSPRRIHQPR 483
                D   L++  S     KERGSKSP+ SPKQ +KP + ++ K +P+RIHQPR
Sbjct: 122 ---NKDAAALIKILS----PKERGSKSPIGSPKQFEKPAQYVNLKCAPQRIHQPR 169


>ref|XP_003598896.1| Polyadenylate-binding protein-interacting protein [Medicago
           truncatula] gi|217071442|gb|ACJ84081.1| unknown
           [Medicago truncatula] gi|355487944|gb|AES69147.1|
           Polyadenylate-binding protein-interacting protein
           [Medicago truncatula] gi|388496110|gb|AFK36121.1|
           unknown [Medicago truncatula]
          Length = 169

 Score =  100 bits (249), Expect = 3e-19
 Identities = 61/175 (34%), Positives = 84/175 (48%), Gaps = 14/175 (8%)
 Frame = +1

Query: 1   LFIPAVFRQVEDFSPEWWELIKTSTWFRDYWTEQHQKEESCEAYXXXXXXXXXXXXXXXX 180
           LFIPA FRQVEDFSP+WWEL+K+STWF +YW  QH++E+  E+                 
Sbjct: 17  LFIPAAFRQVEDFSPQWWELVKSSTWFHNYWLSQHKEEDFVESGGNDATNDDDIEHMLSE 76

Query: 181 XXXVQYSE--------------SNEANESADLTLPVDKTQSXXXXXXXXXXXXXXXXXXX 318
              +   E              S+EA E   +  PV++ +                    
Sbjct: 77  TFDLGIEEDFNFLDNEFEKLVMSDEAQECPVMDEPVEEKKPVHGV--------------- 121

Query: 319 XDPEMDIETLLRNQSLSKTSKERGSKSPMASPKQMDKPVKCISPKYSPRRIHQPR 483
                D   L++  S     KERGSKSP+ SPKQ +KP + ++ K +P+RIHQPR
Sbjct: 122 ---NKDAAALIKILS----PKERGSKSPIGSPKQFEKPAQYVNLKCAPQRIHQPR 169


>gb|AFK42480.1| unknown [Medicago truncatula]
          Length = 169

 Score =  100 bits (248), Expect = 4e-19
 Identities = 62/177 (35%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
 Frame = +1

Query: 1   LFIPAVFRQVEDFSPEWWELIKTSTWFRDYWTEQHQKEESCEAYXXXXXXXXXXXXXXXX 180
           LFIPA FRQVEDFSP+WWEL+K+STWF +YW  QH++E+  E                  
Sbjct: 17  LFIPAAFRQVEDFSPQWWELVKSSTWFHNYWLSQHKEEDFVE------------------ 58

Query: 181 XXXVQYSESNEANESADLTLPVDKTQSXXXXXXXXXXXXXXXXXXXXD-----PEMD--I 339
                 S  N+A    D+   + +T                      D     P MD  +
Sbjct: 59  ------SGGNDATNDDDIEHMLSETFDLGIEEDFNFLDNEFEKLVMSDEAQECPVMDEPV 112

Query: 340 ETLLRNQSLSK---------TSKERGSKSPMASPKQMDKPVKCISPKYSPRRIHQPR 483
           E       ++K         + KERGSKSP+ SPKQ +KP + ++ K +P+RIHQPR
Sbjct: 113 EEKTPVHGVNKDAAALIKILSPKERGSKSPIGSPKQFEKPAQYVNLKCAPQRIHQPR 169


>gb|ABK96602.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 172

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 60/164 (36%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
 Frame = +1

Query: 1   LFIPAVFRQVEDFSPEWWELIKTSTWFRDYWTEQHQKEESCEAYXXXXXXXXXXXXXXXX 180
           LFIP V+RQVEDFSPEWWEL+KTSTWFRD+W  QH  EES +                  
Sbjct: 17  LFIPNVYRQVEDFSPEWWELVKTSTWFRDFWLSQH-PEESFDGSAGADDDDLTDLLPEDL 75

Query: 181 XXXVQYSESN---EANESADLTLPVDKTQSXXXXXXXXXXXXXXXXXXXXDPEMDIETLL 351
              V+    N   +  E   L    +KT S                       MD++TLL
Sbjct: 76  DVGVEEEFPNLEAQFEEMVKLAEAEEKTDSSAADPKVERKPPNGLI-------MDVKTLL 128

Query: 352 RNQSLSKTSKERGSKSPMASPKQMDKPVKCISPKYSPRRIHQPR 483
           ++ ++ K+ KER  +SP    K   KP  C+  K +   IHQPR
Sbjct: 129 KDMNIPKSPKERSPRSPRILAKYQMKPPHCVVAKRTALYIHQPR 172


Top