BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00001270
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...   417   e-114
ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase ...   417   e-114
ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 ...   410   e-112
ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arab...   409   e-112
emb|CAN79622.1| hypothetical protein VITISV_035896 [Vitis vinifera]   408   e-111

>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|332010042|gb|AED97425.1| U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score =  417 bits (1073), Expect = e-114
 Identities = 216/345 (62%), Positives = 261/345 (75%)
 Frame = +1

Query: 1    QRTEHGPSVAPEIQIDGSDNSMTEFGSEFVFNAPSRFIIDVPMXXXXXXXXXPPATSTSH 180
            Q T    + A E+      N   EFG++ VFN P+RF+++  +              TS 
Sbjct: 219  QPTHQSETYADEV------NGGAEFGADLVFNLPARFLVEASLDETGFVDVESNDAHTSF 272

Query: 181  HEGWHGQSEPTVYQSSVSRGSINLGWLREECGRIVQKGGSQLSGDELAMALCQVLDSDKP 360
             EGW G S+    ++++S G  NL WLR+ CGR+V++  SQLS +ELAMA+C+ LDSDKP
Sbjct: 273  SEGWSGVSDT---KNNLSAGKFNLSWLRDACGRMVRETNSQLSREELAMAICRFLDSDKP 329

Query: 361  GDEIAGDLLDLVGDGAFETIQDLLKHRKELVDAIHHGLLMLKSEKMPSNTQPKMPSYGTQ 540
            G+EIAGDLLDLVGDGAFET+QDL+ HRKE+VDAIHHG ++LKS+K  SNTQ +MP+YGTQ
Sbjct: 330  GEEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGQMILKSDKAASNTQSRMPTYGTQ 389

Query: 541  VTIQTESEKQIDKLXXXXXXXXXXGAEQGLDHELSSINFSSLLQASEKKNLFDELIGSGQ 720
            VT+QTES KQI+KL           A+ GL+ E+S  NFSSLL+ASEKK  F++LIGSG 
Sbjct: 390  VTVQTESAKQIEKLRRKEEKKNKRNADLGLESEISEANFSSLLEASEKKTAFEDLIGSG- 448

Query: 721  ELHSLSVSALPQGTVRKYNKGYEEVRIPPTPTSEMKPGEKLIEIKELDDFAQTAFQGYKS 900
            E +SL++ ALPQGTVRK+ KGYEEV IPPTPT++MKPGEKLIEIKELDDFAQ AF GYKS
Sbjct: 449  EANSLAL-ALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAAFHGYKS 507

Query: 901  LNRIQSRIFQATYHTNENILVCAPTGAGKTNIAMIAVLHEIGQHF 1035
            LNRIQSRIFQ  YHTNENILVCAPTGAGKTNIAMI+VLHEI QHF
Sbjct: 508  LNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHF 552


>ref|NP_001190584.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
            gi|9759460|dbj|BAB10376.1| RNA helicase [Arabidopsis
            thaliana] gi|332010043|gb|AED97426.1| U5 small nuclear
            ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2157

 Score =  417 bits (1073), Expect = e-114
 Identities = 216/345 (62%), Positives = 261/345 (75%)
 Frame = +1

Query: 1    QRTEHGPSVAPEIQIDGSDNSMTEFGSEFVFNAPSRFIIDVPMXXXXXXXXXPPATSTSH 180
            Q T    + A E+      N   EFG++ VFN P+RF+++  +              TS 
Sbjct: 219  QPTHQSETYADEV------NGGAEFGADLVFNLPARFLVEASLDETGFVDVESNDAHTSF 272

Query: 181  HEGWHGQSEPTVYQSSVSRGSINLGWLREECGRIVQKGGSQLSGDELAMALCQVLDSDKP 360
             EGW G S+    ++++S G  NL WLR+ CGR+V++  SQLS +ELAMA+C+ LDSDKP
Sbjct: 273  SEGWSGVSDT---KNNLSAGKFNLSWLRDACGRMVRETNSQLSREELAMAICRFLDSDKP 329

Query: 361  GDEIAGDLLDLVGDGAFETIQDLLKHRKELVDAIHHGLLMLKSEKMPSNTQPKMPSYGTQ 540
            G+EIAGDLLDLVGDGAFET+QDL+ HRKE+VDAIHHG ++LKS+K  SNTQ +MP+YGTQ
Sbjct: 330  GEEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGQMILKSDKAASNTQSRMPTYGTQ 389

Query: 541  VTIQTESEKQIDKLXXXXXXXXXXGAEQGLDHELSSINFSSLLQASEKKNLFDELIGSGQ 720
            VT+QTES KQI+KL           A+ GL+ E+S  NFSSLL+ASEKK  F++LIGSG 
Sbjct: 390  VTVQTESAKQIEKLRRKEEKKNKRNADLGLESEISEANFSSLLEASEKKTAFEDLIGSG- 448

Query: 721  ELHSLSVSALPQGTVRKYNKGYEEVRIPPTPTSEMKPGEKLIEIKELDDFAQTAFQGYKS 900
            E +SL++ ALPQGTVRK+ KGYEEV IPPTPT++MKPGEKLIEIKELDDFAQ AF GYKS
Sbjct: 449  EANSLAL-ALPQGTVRKHLKGYEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAAFHGYKS 507

Query: 901  LNRIQSRIFQATYHTNENILVCAPTGAGKTNIAMIAVLHEIGQHF 1035
            LNRIQSRIFQ  YHTNENILVCAPTGAGKTNIAMI+VLHEI QHF
Sbjct: 508  LNRIQSRIFQTVYHTNENILVCAPTGAGKTNIAMISVLHEIKQHF 552


>ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3 [Vitis
            vinifera] gi|297733882|emb|CBI15129.3| unnamed protein
            product [Vitis vinifera]
          Length = 2093

 Score =  410 bits (1053), Expect = e-112
 Identities = 208/334 (62%), Positives = 253/334 (75%)
 Frame = +1

Query: 34   EIQIDGSDNSMTEFGSEFVFNAPSRFIIDVPMXXXXXXXXXPPATSTSHHEGWHGQSEPT 213
            E Q+ GS + + EFG+   F APSRF++D  +           A  ++  + W+  +  T
Sbjct: 154  ERQVHGSSDDV-EFGANLAFQAPSRFLVDASLEDEEFLGEES-APPSAGRDRWYDHTAST 211

Query: 214  VYQSSVSRGSINLGWLREECGRIVQKGGSQLSGDELAMALCQVLDSDKPGDEIAGDLLDL 393
               S+V R +  L WLR+ C  IV+   SQLS DELAMA+C+VLDSDKPG+EIAGDLLDL
Sbjct: 212  HDHSAVDRRNFTLRWLRDACDGIVRGSTSQLSQDELAMAICRVLDSDKPGEEIAGDLLDL 271

Query: 394  VGDGAFETIQDLLKHRKELVDAIHHGLLMLKSEKMPSNTQPKMPSYGTQVTIQTESEKQI 573
            VGD AFE +QD++ HRK+L DAIHHGLL+LKSEK  SN+Q +MPSYGTQVT+QTESE+QI
Sbjct: 272  VGDNAFEMVQDIISHRKDLTDAIHHGLLVLKSEKAASNSQSRMPSYGTQVTVQTESERQI 331

Query: 574  DKLXXXXXXXXXXGAEQGLDHELSSINFSSLLQASEKKNLFDELIGSGQELHSLSVSALP 753
            DKL          G+E G+   L + NFSSLL+ASE K+ FD LIGSG+  HSL V+ALP
Sbjct: 332  DKLRRKEEKRHRRGSEYGVGDNLLAANFSSLLEASENKSPFDGLIGSGEGPHSLPVTALP 391

Query: 754  QGTVRKYNKGYEEVRIPPTPTSEMKPGEKLIEIKELDDFAQTAFQGYKSLNRIQSRIFQA 933
            QGT+RK+ KGYEEV +PPTPT+++KPGEKLI+IKELDDFAQ AF GYKSLNRIQSRIFQ 
Sbjct: 392  QGTLRKHYKGYEEVIVPPTPTAQLKPGEKLIDIKELDDFAQAAFHGYKSLNRIQSRIFQT 451

Query: 934  TYHTNENILVCAPTGAGKTNIAMIAVLHEIGQHF 1035
             Y+TNEN+LVCAPTGAGKTNIAMIA+LHEIGQHF
Sbjct: 452  VYYTNENVLVCAPTGAGKTNIAMIAILHEIGQHF 485


>ref|XP_002864717.1| hypothetical protein ARALYDRAFT_919354 [Arabidopsis lyrata subsp.
            lyrata] gi|297310552|gb|EFH40976.1| hypothetical protein
            ARALYDRAFT_919354 [Arabidopsis lyrata subsp. lyrata]
          Length = 2112

 Score =  409 bits (1052), Expect = e-112
 Identities = 209/326 (64%), Positives = 252/326 (77%)
 Frame = +1

Query: 58   NSMTEFGSEFVFNAPSRFIIDVPMXXXXXXXXXPPATSTSHHEGWHGQSEPTVYQSSVSR 237
            N   EFG++ VFN P+RF+++  +               S  EGW   S+    +++ S 
Sbjct: 198  NGGAEFGADLVFNLPARFLVEASLDEKGFLDVESNDAHASFSEGWSDVSDT---KNNHSA 254

Query: 238  GSINLGWLREECGRIVQKGGSQLSGDELAMALCQVLDSDKPGDEIAGDLLDLVGDGAFET 417
            G  NL WLR+ CG++V++  SQLS +ELAMA+C+ LDSDKPG+EIAGDLLDLVGDGAFET
Sbjct: 255  GKFNLSWLRDACGQMVRETNSQLSREELAMAICRFLDSDKPGEEIAGDLLDLVGDGAFET 314

Query: 418  IQDLLKHRKELVDAIHHGLLMLKSEKMPSNTQPKMPSYGTQVTIQTESEKQIDKLXXXXX 597
            +QDL+ HRKE+VDAIHHG ++LKS+K  SNTQ +MP+YGTQVT+QTES KQI+KL     
Sbjct: 315  VQDLIMHRKEIVDAIHHGQMILKSDKTASNTQSRMPTYGTQVTVQTESAKQIEKLRRKEE 374

Query: 598  XXXXXGAEQGLDHELSSINFSSLLQASEKKNLFDELIGSGQELHSLSVSALPQGTVRKYN 777
                  A+ GL+ E+S  NFSSLL+ASEKK  F++LIGSG E +SL++ ALPQGTVRK+ 
Sbjct: 375  KKNKRNADLGLESEISEANFSSLLEASEKKTAFEDLIGSG-EANSLAL-ALPQGTVRKHL 432

Query: 778  KGYEEVRIPPTPTSEMKPGEKLIEIKELDDFAQTAFQGYKSLNRIQSRIFQATYHTNENI 957
            KGYEEV IPPTPT++MKPGEKLIEIKELDDFAQ AF GYKSLNRIQSRIFQ  YHTNENI
Sbjct: 433  KGYEEVFIPPTPTAQMKPGEKLIEIKELDDFAQAAFHGYKSLNRIQSRIFQTVYHTNENI 492

Query: 958  LVCAPTGAGKTNIAMIAVLHEIGQHF 1035
            LVCAPTGAGKTNIAMI+VLHEI QHF
Sbjct: 493  LVCAPTGAGKTNIAMISVLHEIKQHF 518


>emb|CAN79622.1| hypothetical protein VITISV_035896 [Vitis vinifera]
          Length = 735

 Score =  408 bits (1049), Expect = e-111
 Identities = 208/334 (62%), Positives = 252/334 (75%)
 Frame = +1

Query: 34   EIQIDGSDNSMTEFGSEFVFNAPSRFIIDVPMXXXXXXXXXPPATSTSHHEGWHGQSEPT 213
            E Q+ GS + + EFG+   F APSRF++D  +           A  ++  + W+  +  T
Sbjct: 154  ERQVHGSSDDV-EFGANLAFQAPSRFLVDASLEDEEFLGEES-APPSAGRDRWYDHTAST 211

Query: 214  VYQSSVSRGSINLGWLREECGRIVQKGGSQLSGDELAMALCQVLDSDKPGDEIAGDLLDL 393
               S+V R +  L WLR+ C  IV+   SQLS DELAMA+C+VLDSDKPG+EIAGDLLDL
Sbjct: 212  HDHSAVDRRNFTLRWLRDACDGIVRGSTSQLSQDELAMAICRVLDSDKPGEEIAGDLLDL 271

Query: 394  VGDGAFETIQDLLKHRKELVDAIHHGLLMLKSEKMPSNTQPKMPSYGTQVTIQTESEKQI 573
            VGD AFE +QD++ HRK+L DAIHHGLL+LKSEK  SN+Q +MPSYGTQVT+QTESE+QI
Sbjct: 272  VGDNAFEMVQDIISHRKDLTDAIHHGLLVLKSEKAASNSQSRMPSYGTQVTVQTESERQI 331

Query: 574  DKLXXXXXXXXXXGAEQGLDHELSSINFSSLLQASEKKNLFDELIGSGQELHSLSVSALP 753
            DKL          G+E G+   L + NFSSLL+ASE K+ FD LIGSG+  HSL V+ALP
Sbjct: 332  DKLRRKEEKRHRRGSEYGVGDNLLAANFSSLLEASENKSPFDGLIGSGEGPHSLPVTALP 391

Query: 754  QGTVRKYNKGYEEVRIPPTPTSEMKPGEKLIEIKELDDFAQTAFQGYKSLNRIQSRIFQA 933
            QGT+RK+ KGYEEV  PPTPT+++KPGEKLI+IKELDDFAQ AF GYKSLNRIQSRIFQ 
Sbjct: 392  QGTLRKHYKGYEEVIXPPTPTAQLKPGEKLIDIKELDDFAQAAFHGYKSLNRIQSRIFQT 451

Query: 934  TYHTNENILVCAPTGAGKTNIAMIAVLHEIGQHF 1035
             Y+TNEN+LVCAPTGAGKTNIAMIA+LHEIGQHF
Sbjct: 452  VYYTNENVLVCAPTGAGKTNIAMIAILHEIGQHF 485