BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes23_contig00028031
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    86   5e-15
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    86   5e-15
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    84   3e-14
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...    83   3e-14
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    83   4e-14
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...    82   6e-14
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...    82   6e-14
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...    82   6e-14
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    82   6e-14
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]            82   6e-14
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...    82   1e-13
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]         82   1e-13
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    80   3e-13
gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subc...    78   1e-12
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...    78   1e-12
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    78   1e-12
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    78   1e-12
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                78   1e-12
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 78   1e-12
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      78   1e-12

>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  DLELEQLDVK AFLHGELEEEIYM QPEGF+VPGKED+VCKL
Sbjct: 905  SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKL 952


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/48 (85%), Positives = 44/48 (91%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLELEQLDVK AFLHGELEEEIYM QPEGF+VPGKED+VCKL
Sbjct: 758 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKL 805


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 40/48 (83%), Positives = 44/48 (91%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLELEQLDVK AFL+GELEEEIYM QPEGF+VPGKED+VCKL
Sbjct: 841 SIVAMHDLELEQLDVKTAFLYGELEEEIYMDQPEGFIVPGKEDYVCKL 888


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
           gi|18542925|gb|AAL75759.1| Putative pol polyprotein
           [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1005

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLELEQLDVK AFLHGELEEEIYM QPEGF+VPGKE +VCKL
Sbjct: 589 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKL 636


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+V   DLELEQLDVK  FLHGELEEEIYM QPEGF+VPGKED+VCKL
Sbjct: 905  SIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKL 952


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL
Sbjct: 916  SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKL 963


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL
Sbjct: 916  SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKL 963


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL
Sbjct: 916  SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKL 963


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            ++VAH +LELEQLDVK AFLHGELEEEIYMTQP+GF VPGKE+ VCKL
Sbjct: 890  AIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKL 937


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  DLELEQLDVK AFLHGELEE+IYM QPEGF+VPGKE +VCKL
Sbjct: 918  SIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKL 965


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 39/48 (81%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLELEQLDVK  FLHGELE EIYM QPEGF+VPGKED+VCKL
Sbjct: 796 SIVAMHDLELEQLDVKTTFLHGELEVEIYMDQPEGFIVPGKEDYVCKL 843


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 38/48 (79%), Positives = 43/48 (89%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLEL+QLDVK  FLHGELE+EIYM QPEGF+VPGKED+VCKL
Sbjct: 238 SIVAMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKL 285


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = -3

Query: 143 LVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           +VA  DLELEQLDVK  FLHGELEEEIYM QPEGF+VPGKED VCKL
Sbjct: 852 IVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKL 898


>gb|ABA97036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 966

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/48 (75%), Positives = 41/48 (85%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  DLELEQLDVK  FLHGELEEEIYM QPE F++P KED++CKL
Sbjct: 711 SIVAMHDLELEQLDVKTTFLHGELEEEIYMDQPEEFIIPSKEDYICKL 758


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 657 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 704


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 851 SIVAMYDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 898


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1262

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146  SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
            S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 888  SIVAMYDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 935


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 673 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 720


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 841 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 888


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 SLVAH*DLELEQLDVKIAFLHGELEEEIYMTQPEGFVVPGKEDWVCKL 3
           S+VA  D ELEQ+DVK AFLHGELEE+IYM QPEGFVVPGKE+ VC+L
Sbjct: 824 SIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRL 871