BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Achyranthes22_contig00027662
         (3781 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p...  1471   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1331   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1293   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1290   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]        1288   0.0  
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...  1284   0.0  
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]  1283   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...  1283   0.0  
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...  1282   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1282   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...  1278   0.0  
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1278   0.0  
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu...  1269   0.0  
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...  1269   0.0  
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m...  1266   0.0  
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr...  1266   0.0  
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...  1266   0.0  
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...  1264   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...  1264   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1264   0.0  

>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
            [Chenopodium album]
          Length = 988

 Score = 1471 bits (3807), Expect = 0.0
 Identities = 731/989 (73%), Positives = 823/989 (83%), Gaps = 6/989 (0%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKPSSYATRFKEPSQCISKFRPLLGYNS---RFSFVGFGRN 3487
            MW+ ASK ++LR I+ S +LKPSS  +R+KE SQ  +K R  LG NS   RF  +GFGRN
Sbjct: 1    MWKKASKFEILRKIRNSGELKPSSNVSRWKESSQDSAKIRQFLGQNSVNPRFPMLGFGRN 60

Query: 3486 AELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXE--DDDENREVL 3313
             ELL +N+E G  +FMF  NPFGI G Y Q T C Y               +DDE RE++
Sbjct: 61   GELLCRNSEMGGSNFMFYANPFGIFGFYAQSTSCSYATAAAAEEIVTASSEEDDEIRELV 120

Query: 3312 GETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLADM 3133
             E +KLE   P  +RRK+P +M++GM++ +YNVL+KRQIK+ET+AWNEAAREYQELLADM
Sbjct: 121  DEINKLERVKPQSIRRKEPINMVAGMTAGRYNVLRKRQIKVETEAWNEAAREYQELLADM 180

Query: 3132 CEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVIT 2953
            CEQ+LAPNLPYMKSLFLGWFEPLK+AI+A QE  K  G+N+  Y   FD+LPADMMAVIT
Sbjct: 181  CEQKLAPNLPYMKSLFLGWFEPLKDAIKAHQEACKV-GRNRPLYGECFDELPADMMAVIT 239

Query: 2952 MHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSKGNSXXXXXXXXXXXXX 2773
            MHKL  LLM+GSGNG  TV+QAA QIGEA+EQE KIR+FLEKSK                
Sbjct: 240  MHKLMGLLMTGSGNGGTTVIQAATQIGEAVEQEAKIRKFLEKSKKKPATNNNDEDDSAKA 299

Query: 2772 XXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTETAYIQPPLD 2593
                  KVT L+KKQ + QVR+IV+G DD KPW QDNQVKVG KLI LL ETAYIQPP D
Sbjct: 300  QQRLAKKVTTLMKKQKISQVREIVRGQDDSKPWSQDNQVKVGCKLIQLLAETAYIQPPAD 359

Query: 2592 QSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTARHMVIPYMPML 2413
            Q ADGP DIRPAFIHTQKT  KES+KG+ RRYGVIECDPLVR+GLEKTARHMVIPYMPML
Sbjct: 360  QLADGPPDIRPAFIHTQKTVCKESQKGLRRRYGVIECDPLVRRGLEKTARHMVIPYMPML 419

Query: 2412 VPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAK-RNLNAVFEALDTLGNTKWRI 2236
            +PPLNWTGY+KGA+L+LPSYIMRTHG KQQRDA K +A+  NL  VFEALDTLGNTKWR+
Sbjct: 420  IPPLNWTGYDKGAYLYLPSYIMRTHGVKQQRDAIKRVARDNNLCTVFEALDTLGNTKWRV 479

Query: 2235 NKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXXKENSERHS 2056
            NKKVL+IIDRIWASGG LADLV+R            D   I+          K+N+ERHS
Sbjct: 480  NKKVLSIIDRIWASGGCLADLVDREDMPLPGEPDTDDAEEIKKWKWKVKHVKKDNAERHS 539

Query: 2055 QRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL 1876
            QRCDTELKL+VARKMK+E+GFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL
Sbjct: 540  QRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPL 599

Query: 1875 GKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRWWLNAEDPF 1696
            GKSGL WLK+H+ANLYAGGVDK SYEGR+AFTEN LD++FDSADRPLEG+RWWL AEDPF
Sbjct: 600  GKSGLNWLKVHVANLYAGGVDKLSYEGRVAFTENRLDDVFDSADRPLEGRRWWLTAEDPF 659

Query: 1695 QCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLIAGDKP 1516
            QCL+ACI++T+ALRSSSPED++SHIP+HQDGSCNGLQHYAALGRDKLGAEAVNL+AG KP
Sbjct: 660  QCLAACINLTDALRSSSPEDYLSHIPIHQDGSCNGLQHYAALGRDKLGAEAVNLVAGGKP 719

Query: 1515 ADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSVYGVTYIGA 1336
            ADVYSGIAARV EIMR DA+KDPS EP A  AKLLL+QVDRKLVKQTVMTSVYGVTYIG 
Sbjct: 720  ADVYSGIAARVFEIMRGDAEKDPSIEPNAFHAKLLLNQVDRKLVKQTVMTSVYGVTYIGV 779

Query: 1335 RDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLGDCAKIIASDN 1156
            RDQIK+RLKER+AI DD +LF+A+CYAAKTTMTALEEMF+AAR IM WLGDCAKIIAS+N
Sbjct: 780  RDQIKRRLKERDAIVDDNDLFAASCYAAKTTMTALEEMFEAARSIMGWLGDCAKIIASEN 839

Query: 1155 EAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPPNFVHSLDG 976
            +  RW+TPLGLPVVQPYR+ GRRLVKTSLQVLTLR DTDKVM +RQRTAFPPNFVHSLDG
Sbjct: 840  QPARWSTPLGLPVVQPYRNHGRRLVKTSLQVLTLRCDTDKVMAKRQRTAFPPNFVHSLDG 899

Query: 975  SHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPILENLLESFKK 796
            SHMMMTAIACK+AG+NFAGVHDSYWTHACDV+ MN+ILREKFVELYEQPILENLLESF++
Sbjct: 900  SHMMMTAIACKKAGMNFAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQE 959

Query: 795  SFPALQFPPLPERGDFDLREVLESPYFFN 709
            SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 960  SFPTLQFPPLPERGDFDLREVLESPYFFN 988


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1331 bits (3444), Expect = 0.0
 Identities = 678/997 (68%), Positives = 786/997 (78%), Gaps = 14/997 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQ---LKPSSYATRFKEPSQCISKFRPLLGY---NSRFSFVGF 3496
            MWRN +K    R ++LS+Q     PS+  +RF  P     K R L      NS     G 
Sbjct: 1    MWRNLAKHAYTRRLQLSSQHSSFSPSNCTSRFYFPD----KARALESQDHVNSLRPVAGL 56

Query: 3495 GRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDD----- 3331
             R   L +Q +E G   F  +  P    GL+       Y             ++D     
Sbjct: 57   RRIGVLSFQQDELGRPGFGVTKTPVNFFGLFG------YQKGYASAAEAIASEEDMSGVD 110

Query: 3330 ENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQ 3151
            E +E++ E +K +       + +K   +I G++  K+NVL++RQIK+ET+AW EAA+EY+
Sbjct: 111  EVQELVEEVNKGD-------KLEKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYR 163

Query: 3150 ELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPAD 2971
            ELL+DMCEQ+LAPNLPY+KSLFLGWFEPL++ I AEQ+L K  GKN+  YAPYFD LPAD
Sbjct: 164  ELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQ-GKNRAAYAPYFDHLPAD 222

Query: 2970 MMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK---GNSXXXX 2800
            MMAVITMHKL  LLM+G GNG+A VVQAAC IGEAIE EV+I+RF+EK+K    +S    
Sbjct: 223  MMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPD 282

Query: 2799 XXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTE 2620
                           KV+ L+KKQ ++QVR+IVK  DD KPWGQD  VKVG +LI LL E
Sbjct: 283  GGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIE 342

Query: 2619 TAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTARH 2440
            TAYIQPP DQ  DGP DIRPAF+HT KT  KE++KG  RRYGVIECDPLVR+GLEKTARH
Sbjct: 343  TAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGT-RRYGVIECDPLVRKGLEKTARH 401

Query: 2439 MVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEALDT 2260
            MVIPYMPMLVPPLNWTGY+KGA+LFLPSY+MR HGA+QQR+A K   ++ L   FEAL+T
Sbjct: 402  MVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAIKRAPRKALEPAFEALNT 461

Query: 2259 LGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXX 2080
            LGNTKWRINK+VL +IDRIWASGGRLADLV+R            D A IR          
Sbjct: 462  LGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVK 521

Query: 2079 KENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGIL 1900
            KENSERHSQRCD ELKL+VARKMK+EDGF+YPHNLDFRGRAYPMHP+LNHLGSDLCRGIL
Sbjct: 522  KENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGIL 581

Query: 1899 EFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRW 1720
            EFAEGRPLGKSGLRWLKIHLAN+YAGGVDK SYEGR+AFTEN+L++IFDSADRPLEG+RW
Sbjct: 582  EFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRW 641

Query: 1719 WLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAV 1540
            WL+AEDPFQCL+ CI+++EALRSSSPE  +SH+PVHQDGSCNGLQHYAALGRDKLGA AV
Sbjct: 642  WLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAV 701

Query: 1539 NLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSV 1360
            NL+AG+KPADVYSGIAARVL+IM+RDAQKDP+TEP AL A+LL+ QVDRKLVKQTVMTSV
Sbjct: 702  NLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSV 761

Query: 1359 YGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLGDC 1180
            YGVTYIGARDQIK+RLKER AIAD+ E+FSA+CYAAKTT+TAL EMF+AAR IM WLGDC
Sbjct: 762  YGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDC 821

Query: 1179 AKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPP 1000
            AK+IAS+N  VRW TPLGLPVVQPYR +GR L+KTSLQVL+L+ +TDKVMV+RQRTAFPP
Sbjct: 822  AKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPP 881

Query: 999  NFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPILE 820
            NFVHSLDGSHMMMTA+AC++AGLNFAGVHDSYWTHACDV++MNRILREKFVELY  PILE
Sbjct: 882  NFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILE 941

Query: 819  NLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            NLLE F+KSFP L FPPLPERGDFDLREVLESPYFFN
Sbjct: 942  NLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score = 1293 bits (3346), Expect = 0.0
 Identities = 662/999 (66%), Positives = 772/999 (77%), Gaps = 16/999 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQL--KPSSYATRFKEPSQCI--------SKFRPLLGYNSRFS 3508
            MWRN +K  + R  +    L  +P S    F   SQ +          F P    +S FS
Sbjct: 40   MWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFS 99

Query: 3507 FVGFGRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDE 3328
             +GF R  E+  + +  G   F    N  G SG   +                     DE
Sbjct: 100  EMGFRRIGEISSREDAVGRPSFGCLRNQMGFSGFCPKSYASVAEAVSSTDVEEDVSASDE 159

Query: 3327 NREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQE 3148
             +E+LGE  K E K     +R++   M  GM   +Y  L++RQ+KIET+AW  AA+EY+E
Sbjct: 160  IQELLGEMKK-EEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKE 218

Query: 3147 LLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADM 2968
            LL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI  EQEL +  GKNK  YAPYFDQLPADM
Sbjct: 219  LLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRL-GKNKAAYAPYFDQLPADM 277

Query: 2967 MAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSKG-----NSXXX 2803
            M+VITMHKL  LLM+G  +G+  VVQAAC IG+AIEQEV+I  FLEK+K      +    
Sbjct: 278  MSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVE 337

Query: 2802 XXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLT 2623
                            KVTNL+KKQ +   R+IVKGHD+ KPWG + + KVG +LI LL 
Sbjct: 338  GGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLM 397

Query: 2622 ETAYIQPPLD-QSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTA 2446
            +TAYIQPP+D Q AD P DIRPAF+HT KT  +E+KK + RR+GVIECDPLV++GLE+TA
Sbjct: 398  QTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKK-IGRRFGVIECDPLVKKGLERTA 456

Query: 2445 RHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEAL 2266
            RHMVIPY+PMLVPPL WTGY+KGAHLFLPSY+MRTHGA+QQR+A K   +  L  VFEAL
Sbjct: 457  RHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEAL 516

Query: 2265 DTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXX 2086
            +TLGNTKWRINK++ +++DRIWA GG LADLV+R            D A +R        
Sbjct: 517  NTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKS 576

Query: 2085 XXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 1906
              K NSERHSQRCD ELKL+VARKMK+EDGF+YPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 577  VKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRG 636

Query: 1905 ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQ 1726
            ILEFAEGRPLG SGL WLKIHLANL+AGGVDK S+EGRI FTEN+LD+IFDSADRPLEG+
Sbjct: 637  ILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGK 696

Query: 1725 RWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAE 1546
            RWWLNAEDPFQ L+ACI+++EALRSSSPE  +SHIPVHQDGSCNGLQHYAALGRD+LGA 
Sbjct: 697  RWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGAT 756

Query: 1545 AVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMT 1366
            AVNL+AG+KPADVYSGIAARVL+IM+RDA+KDP+  P AL A++L++QVDRKLVKQTVMT
Sbjct: 757  AVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMT 816

Query: 1365 SVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLG 1186
            SVYGVTYIGARDQIK+RLKERNAIADD ELF AACYAAK T+TAL EMFQAAR IM WLG
Sbjct: 817  SVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLG 876

Query: 1185 DCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAF 1006
            DCAKIIAS+N+ VRWTTPLGLPVVQPYR +GR L+KTSLQVLTL+ +T+ +MV+RQRTAF
Sbjct: 877  DCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAF 936

Query: 1005 PPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPI 826
            PPNFVHSLDGSHMMMTAIACK+AGLNFAGVHDSYWTHACDV++MNR+LREKFV+LYE PI
Sbjct: 937  PPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPI 996

Query: 825  LENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            LENLLESF++SFPAL+FPPLPERGDFDLREVLESPYFFN
Sbjct: 997  LENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score = 1290 bits (3338), Expect = 0.0
 Identities = 674/1007 (66%), Positives = 769/1007 (76%), Gaps = 24/1007 (2%)
 Frame = -2

Query: 3657 MWRNASK---SQLLRNIKLSAQLKPSSYATRFKE--PSQCI---SKFRPLLGYNSRFSFV 3502
            MWR  SK   S+  RN   SA L  S Y++ F +  P QC+   S   P LG +    F 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSIFS 60

Query: 3501 GFGRNAELLYQNNESGSF--HFMFSTNPF-----------GISGLYNQPTCCCYXXXXXX 3361
               R    L    E  S   H   S N             G  G  +      Y      
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSAAEA 120

Query: 3360 XXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETD 3181
                  ED DE +E++ E  K        L+ K+P + I GM   KYN L++RQIK+ET+
Sbjct: 121  IVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKT-IGGMGVGKYNFLRRRQIKVETE 179

Query: 3180 AWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHY 3001
            AW EAA+EYQELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI AEQ+L    GKN+  Y
Sbjct: 180  AWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAY 238

Query: 3000 APYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK 2821
            AP+FDQLPA+MMAVITMHKL  LLM+G G G+A VVQAA  IGEAIE E +I RFLEK+K
Sbjct: 239  APFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTK 298

Query: 2820 GN---SXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKV 2650
             +   S                   KV  L+KKQ ++QVRKIVK  DD KPWGQDN VKV
Sbjct: 299  KSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKV 358

Query: 2649 GGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLV 2470
            G +LI +L ETAYIQPP DQ  DGP DIRPAF+HT KT   E+ KG  RRYGVI+CDPLV
Sbjct: 359  GCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKG-SRRYGVIQCDPLV 415

Query: 2469 RQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRN 2290
            R+GL+KTARHMVIPYMPMLVPP +W GY+KG +LFLPSYIMRTHGAKQQR+A K + K+ 
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 2289 LNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIR 2110
            L  VF+ALDTLGNTKWR+N+KVL I+DRIWASGGRLADLV+R            D A IR
Sbjct: 476  LEPVFQALDTLGNTKWRVNRKVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 535

Query: 2109 XXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNH 1930
                      KEN ERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 1929 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDS 1750
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDK SYEGR+AF+EN+L++IFDS
Sbjct: 596  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDS 655

Query: 1749 ADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAAL 1570
            A+RPLEG+RWWL AEDPFQCL+ CI+I EALRS SPE  +S++P+HQDGSCNGLQHYAAL
Sbjct: 656  AERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAAL 715

Query: 1569 GRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRK 1390
            GRDKLGA AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+ +P  + A+LL++QVDRK
Sbjct: 716  GRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRK 775

Query: 1389 LVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAA 1210
            LVKQTVMTSVYGVTYIGARDQIKKRLKER  I DD ELF+AACYAAKTT+TAL EMF+AA
Sbjct: 776  LVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAA 835

Query: 1209 RDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVM 1030
            R IM WLGDCAKIIA +N  VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVM
Sbjct: 836  RSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVM 895

Query: 1029 VRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKF 850
            V+RQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHACDV+ MN+ILREKF
Sbjct: 896  VKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKF 955

Query: 849  VELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            VELY+ PILENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 956  VELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score = 1288 bits (3333), Expect = 0.0
 Identities = 673/1007 (66%), Positives = 769/1007 (76%), Gaps = 24/1007 (2%)
 Frame = -2

Query: 3657 MWRNASK---SQLLRNIKLSAQLKPSSYATRFKE--PSQCI---SKFRPLLGYNSRFSFV 3502
            MWR  SK   S+  RN   SA L  S Y++ F +  P QC+   S   P LG +    F 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTHPNLGLSQNSIFS 60

Query: 3501 GFGRNAELLYQNNESGSF--HFMFSTNPF-----------GISGLYNQPTCCCYXXXXXX 3361
               R    L    E  S   H   S N             G  G  +      Y      
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSTFSSVKGDFRICGKRGSGSLGRLRSYGSAAEA 120

Query: 3360 XXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETD 3181
                  ED DE +E++ E  K        L+ K+P + I GM   KYN L++RQIK+ET+
Sbjct: 121  IVSTSEEDIDEIQELIEEMDKENEALKANLQPKQPKT-IGGMGVGKYNFLRRRQIKVETE 179

Query: 3180 AWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHY 3001
            AW EAA+EYQELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI AEQ+L    GKN+  Y
Sbjct: 180  AWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAY 238

Query: 3000 APYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK 2821
            AP+FDQLPA+MMAVITMHKL  LLM+G G G+A VVQAA  IGEAIE E +I RFLEK+K
Sbjct: 239  APFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKTK 298

Query: 2820 GN---SXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKV 2650
             +   S                   KV  L+KKQ ++QVRKIVK  DD KPWGQDN VKV
Sbjct: 299  KSNALSGDLEETPGDMMKERERLRKKVKILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKV 358

Query: 2649 GGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLV 2470
            G +LI +L ETAYIQPP DQ  DGP DIRPAF+HT KT   E+ KG  RRYGVI+CDPLV
Sbjct: 359  GCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKTV--ETMKG-SRRYGVIQCDPLV 415

Query: 2469 RQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRN 2290
            R+GL+KTARHMVIPYMPMLVPP +W GY+KG +LFLPSYIMRTHGAKQQR+A K + K+ 
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 2289 LNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIR 2110
            L  VF+ALDTLGNTKWR+N+KVL I++RIWASGGRLADLV+R            D A IR
Sbjct: 476  LEPVFQALDTLGNTKWRVNRKVLGIVNRIWASGGRLADLVDREDVPLPEAPDTEDEAEIR 535

Query: 2109 XXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNH 1930
                      KEN ERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 1929 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDS 1750
            LGSDLCRGILEFAEGRPLG SGLRWLKIHLAN+Y GGVDK SYEGR+AF+EN+L++IFDS
Sbjct: 596  LGSDLCRGILEFAEGRPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDS 655

Query: 1749 ADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAAL 1570
            A+RPLEG+RWWL AEDPFQCL+ CI+I EALRS SPE  +S++P+HQDGSCNGLQHYAAL
Sbjct: 656  AERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAAL 715

Query: 1569 GRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRK 1390
            GRDKLGA AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+ +P  + A+LL++QVDRK
Sbjct: 716  GRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRK 775

Query: 1389 LVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAA 1210
            LVKQTVMTSVYGVTYIGARDQIKKRLKER  I DD ELF+AACYAAKTT+TAL EMF+AA
Sbjct: 776  LVKQTVMTSVYGVTYIGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAA 835

Query: 1209 RDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVM 1030
            R IM WLGDCAKIIA +N  VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVM
Sbjct: 836  RSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVM 895

Query: 1029 VRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKF 850
            V+RQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHACDV+ MN+ILREKF
Sbjct: 896  VKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHACDVDQMNKILREKF 955

Query: 849  VELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            VELY+ PILENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 956  VELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 1284 bits (3322), Expect = 0.0
 Identities = 650/1010 (64%), Positives = 769/1010 (76%), Gaps = 27/1010 (2%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQL---KPSSYATRFKEPSQCISKFRPLLG---YNSRFSFVGF 3496
            MWRN +K    R   LS+Q     PSS +  F + S  + K R        N+R   +GF
Sbjct: 1    MWRNLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGF 60

Query: 3495 GRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDENREV 3316
             +  ++  Q  E G    +  + P+GISG  N      Y            E+D    E 
Sbjct: 61   RQVGDMASQKEELGRCSSLNPSYPYGISGFCNYAKG--YASVAEAIASTDGEEDSSGSEE 118

Query: 3315 LGETSK--LETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELL 3142
            + E  +  +   N      K+P  ++ GM   KYN+L+KRQIK+ET+AW EAA+EYQELL
Sbjct: 119  IQEMLEDLIRENNMVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELL 178

Query: 3141 ADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMA 2962
            ADMCEQ+LAPNLPY+KSLFLGWFEPL++AI A+Q+  K     + H APYFD LPAD MA
Sbjct: 179  ADMCEQKLAPNLPYIKSLFLGWFEPLRDAIAADQDSCKQPNSRQSH-APYFDHLPADKMA 237

Query: 2961 VITMHKLTSLLMSGSGN-GTATVVQAACQIGEAIEQEVKIRRFLEKSKG----------- 2818
            VITMHKL  LLM+ +G  G+  VVQAAC IGEAIE EV+I RFLEK+K            
Sbjct: 238  VITMHKLMGLLMTNNGGIGSVRVVQAACAIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEA 297

Query: 2817 -------NSXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQ 2659
                                        KV  L+K+Q ++QVR IVK  +DLKPWGQ+  
Sbjct: 298  DSVPVTIEQEKLADEQEKLTKEQERLRKKVNKLIKRQKMQQVRGIVKEQEDLKPWGQEAH 357

Query: 2658 VKVGGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECD 2479
            VKVG +LI LL +TAYIQPP+DQ  DGP DIRPAF+H  KT +++++K   RRYGVIECD
Sbjct: 358  VKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQK-TSRRYGVIECD 416

Query: 2478 PLVRQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIA 2299
            P+VR+G+EKTARHMV+PYMPMLVPP+NWTGY++GA+LFLPSY+MRTHGAKQQR+  K   
Sbjct: 417  PIVRKGMEKTARHMVMPYMPMLVPPINWTGYDRGAYLFLPSYVMRTHGAKQQREVVKRTP 476

Query: 2298 KRNLNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVA 2119
            ++ L  VFEALDTLG+TKWR+NK+VL +IDRIWASGGRLADLV+R            D A
Sbjct: 477  RKQLEPVFEALDTLGSTKWRVNKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEA 536

Query: 2118 AIRXXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPH 1939
             IR          KENSERHSQRCD ELKL+ +RKMK+E+GFYYPHNLDFRGRAYPMHP+
Sbjct: 537  EIRKWKWKLKAAKKENSERHSQRCDIELKLAASRKMKDEEGFYYPHNLDFRGRAYPMHPY 596

Query: 1938 LNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEI 1759
            LNHLGSD+CRGILEF+EGR LGKSGLRWLKIHLANLYAGGVDK S++ R AFTEN++DEI
Sbjct: 597  LNHLGSDMCRGILEFSEGRHLGKSGLRWLKIHLANLYAGGVDKLSFDDRAAFTENHVDEI 656

Query: 1758 FDSADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHY 1579
            FDSADRPLEG+RWWL AEDPFQCL+ACI++ EALRS SPE  +S++PVHQDGSCNGLQHY
Sbjct: 657  FDSADRPLEGRRWWLGAEDPFQCLAACINLCEALRSPSPETTISYMPVHQDGSCNGLQHY 716

Query: 1578 AALGRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQV 1399
            AALGRDKLGA AVNL+ GDKPADVYSGIAARVL+IMR DA+KDP+T P AL A+LL++QV
Sbjct: 717  AALGRDKLGAAAVNLVGGDKPADVYSGIAARVLDIMRNDAEKDPATNPNALHARLLINQV 776

Query: 1398 DRKLVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMF 1219
            DRKLVKQTVMTSVYGVTY+GARDQIK+RLKER +IADD  LF+AACYAA+TT+TAL EMF
Sbjct: 777  DRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGSIADDTALFAAACYAARTTLTALGEMF 836

Query: 1218 QAARDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTD 1039
            +AAR IM WLG+CAK+IAS+N+ VRW TPLGLPVVQPYR +GR L+KTSLQVLTL+ +TD
Sbjct: 837  EAARSIMSWLGECAKVIASENQPVRWITPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETD 896

Query: 1038 KVMVRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILR 859
            KVMV+RQRTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACD+++MNRILR
Sbjct: 897  KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDIDEMNRILR 956

Query: 858  EKFVELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            EKFVELYE PILENLLE F++SFP L FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 957  EKFVELYEAPILENLLEGFQQSFPTLTFPPLPDRGDFDLRDVLESPYFFN 1006


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score = 1283 bits (3320), Expect = 0.0
 Identities = 671/1007 (66%), Positives = 770/1007 (76%), Gaps = 24/1007 (2%)
 Frame = -2

Query: 3657 MWRNASK---SQLLRNIKLSAQLKPSSYATRFKE--PSQCI---SKFRPLLGYNSRFSFV 3502
            MWR  SK   S+  RN   SA L  S Y++ F +  P QC+   S   P LG +    F 
Sbjct: 1    MWRYISKHAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFS 60

Query: 3501 GFGRNAELLYQNNESGSF--HFMFSTNPF-----------GISGLYNQPTCCCYXXXXXX 3361
               R    L    E  S   H   S N             G  G  +      Y      
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAEA 120

Query: 3360 XXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETD 3181
                  ED DE +E++ E +K        L+ K+P + I GM   KYN+L++RQIK+ET+
Sbjct: 121  IASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKT-IGGMGVGKYNLLRRRQIKVETE 179

Query: 3180 AWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHY 3001
            AW EAA+EYQELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI AEQ+L    GKN+  Y
Sbjct: 180  AWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAY 238

Query: 3000 APYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK 2821
            AP+FDQLPA+MMAVITMHKL  LLM+G G G+A VVQAA  IGEAIE E +I RFLEK+K
Sbjct: 239  APFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTK 298

Query: 2820 GN---SXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKV 2650
             +   S                   KV  L+KKQ ++QVRKIVK  DD KPWGQDN VKV
Sbjct: 299  KSNALSGDLEDTPGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKV 358

Query: 2649 GGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLV 2470
            G +LI +L ETAYIQPP DQ  D P DIRPAF+HT KT   E+ KG  RRYGVI+CDPLV
Sbjct: 359  GCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKG-SRRYGVIQCDPLV 415

Query: 2469 RQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRN 2290
            R+GL+KTARHMVIPYMPMLVPP +W GY+KGA+LFLPSYIMRTHGAKQQR+A K + K+ 
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 2289 LNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIR 2110
            L  VF+ALDTLGNTKWR+N+KVL I+DRIWASGGRLADLV+R            D A IR
Sbjct: 476  LEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIR 535

Query: 2109 XXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNH 1930
                      KEN ERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 1929 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDS 1750
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN+Y GGVDK SYEGR+AF+EN++++IFDS
Sbjct: 596  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDS 655

Query: 1749 ADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAAL 1570
            A+RPLEG+RWWL AEDPFQCL+ CI+I EALRS SPE  +S++P+HQDGSCNGLQHYAAL
Sbjct: 656  AERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAAL 715

Query: 1569 GRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRK 1390
            GRD LGA AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+ +P  + A+LL++QVDRK
Sbjct: 716  GRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRK 775

Query: 1389 LVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAA 1210
            LVKQTVMTSVYGVTYIGARDQIK+RLKER  I DD ELF+AACYAAKTT+TAL EMF+AA
Sbjct: 776  LVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAA 835

Query: 1209 RDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVM 1030
            R IM WLGDCAKIIA +N  VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVM
Sbjct: 836  RSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVM 895

Query: 1029 VRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKF 850
            V+RQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DV+ MN+ILREKF
Sbjct: 896  VKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKF 955

Query: 849  VELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            VELY+ PILENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 956  VELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score = 1283 bits (3320), Expect = 0.0
 Identities = 671/1007 (66%), Positives = 770/1007 (76%), Gaps = 24/1007 (2%)
 Frame = -2

Query: 3657 MWRNASK---SQLLRNIKLSAQLKPSSYATRFKE--PSQCI---SKFRPLLGYNSRFSFV 3502
            MWR  SK   S+  RN   SA L  S Y++ F +  P QC+   S   P LG +    F 
Sbjct: 1    MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFS 60

Query: 3501 GFGRNAELLYQNNESGSF--HFMFSTNPF-----------GISGLYNQPTCCCYXXXXXX 3361
               R    L    E  S   H   S N             G  G  +      Y      
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAEA 120

Query: 3360 XXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETD 3181
                  ED DE +E++ E +K        L+ K+P + I GM   KYN+L++RQIK+ET+
Sbjct: 121  IASTSEEDIDEIQELIEEMNKENEALKTNLQPKQPKT-IGGMGVGKYNLLRRRQIKVETE 179

Query: 3180 AWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHY 3001
            AW EAA+EYQELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI AEQ+L    GKN+  Y
Sbjct: 180  AWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAY 238

Query: 3000 APYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK 2821
            AP+FDQLPA+MMAVITMHKL  LLM+G G G+A VVQAA  IGEAIE E +I RFLEK+K
Sbjct: 239  APFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTK 298

Query: 2820 GN---SXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKV 2650
             +   S                   KV  L+KKQ ++QVRKIVK  DD KPWGQDN VKV
Sbjct: 299  KSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKV 358

Query: 2649 GGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLV 2470
            G +LI +L ETAYIQPP DQ  D P DIRPAF+HT KT   E+ KG  RRYGVI+CDPLV
Sbjct: 359  GCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKG-SRRYGVIQCDPLV 415

Query: 2469 RQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRN 2290
            R+GL+KTARHMVIPYMPMLVPP +W GY+KGA+LFLPSYIMRTHGAKQQR+A K + K+ 
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 2289 LNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIR 2110
            L  VF+ALDTLGNTKWR+N+KVL I+DRIWASGGRLADLV+R            D A IR
Sbjct: 476  LEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIR 535

Query: 2109 XXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNH 1930
                      KEN ERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 1929 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDS 1750
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN+Y GGVDK SYEGR+AF+EN++++IFDS
Sbjct: 596  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDS 655

Query: 1749 ADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAAL 1570
            A+RPLEG+RWWL AEDPFQCL+ CI+I EALRS SPE  +S++P+HQDGSCNGLQHYAAL
Sbjct: 656  AERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAAL 715

Query: 1569 GRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRK 1390
            GRD LGA AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+ +P  + A+LL++QVDRK
Sbjct: 716  GRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRK 775

Query: 1389 LVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAA 1210
            LVKQTVMTSVYGVTYIGARDQIK+RLKER  I DD ELF+AACYAAKTT+TAL EMF+AA
Sbjct: 776  LVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAA 835

Query: 1209 RDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVM 1030
            R IM WLGDCAKIIA +N  VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVM
Sbjct: 836  RSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVM 895

Query: 1029 VRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKF 850
            V+RQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DV+ MN+ILREKF
Sbjct: 896  VKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKF 955

Query: 849  VELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            VELY+ PILENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 956  VELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score = 1282 bits (3318), Expect = 0.0
 Identities = 651/1003 (64%), Positives = 762/1003 (75%), Gaps = 20/1003 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKPSSYATRFKEPSQCISKFRPLLGYN---SRFSFVGFGRN 3487
            MWRN ++   L + KL+     SS  T+  +    + K R         S +SF+G  R 
Sbjct: 1    MWRNFARRTSLSSKKLNF----SSDCTQLNQDLDILQKVRHPEAQTLLCSPYSFLGSRRI 56

Query: 3486 AELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDENREVLGE 3307
            + L  QN+E     F   TNPFG S    +                     DE +E + E
Sbjct: 57   SGLSSQNHEFIKPSFTNLTNPFGFSHFLFKGYATAAAQVIASTDESDFSGCDELQEQIEE 116

Query: 3306 TSKLETKNPPPLRRKKPSSM----ISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLA 3139
             +K   K     R+++        I+GM   KY +LKKRQIK+ET+AW EAAREYQELL 
Sbjct: 117  INKHHKKMDAHFRQQQQQQQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAREYQELLT 176

Query: 3138 DMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAV 2959
            DMCEQ+LAPNLPY+KSLFLGWFEPL++AI  EQEL++    NK+ + PYFD LPADMMAV
Sbjct: 177  DMCEQKLAPNLPYIKSLFLGWFEPLRDAIAKEQELSREKN-NKLSHGPYFDALPADMMAV 235

Query: 2958 ITMHKLTSLLMS-GSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK------------G 2818
            ITMHKL  LLM+   GNG+  VVQAAC +GEAIE E +I RFLEK+K            G
Sbjct: 236  ITMHKLMGLLMTTNGGNGSVRVVQAACAVGEAIEHEARIHRFLEKTKKKKKSTKNEEPEG 295

Query: 2817 NSXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKL 2638
                                 KVT L+KKQ V+QVR + KGHDD  PWGQ+ QVKVG +L
Sbjct: 296  KLEPVTSDAEKLAKEQEKLRKKVTELMKKQKVQQVRGLTKGHDDSMPWGQEAQVKVGCRL 355

Query: 2637 IHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGL 2458
            I LL ETAYIQPP++Q  DG  DIRPAF+HT K   K+++K   RRYGVIECDP+VR GL
Sbjct: 356  IQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQK-TSRRYGVIECDPIVRNGL 414

Query: 2457 EKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAV 2278
            EK+ARHMVIPYMPMLVPPLNW GY++GA+LFLPSY+MRTHGAKQQR+A K    + L  V
Sbjct: 415  EKSARHMVIPYMPMLVPPLNWEGYDQGAYLFLPSYVMRTHGAKQQRNAVKRTPWKQLEPV 474

Query: 2277 FEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXX 2098
            +EAL+TLGNTKWRINKK+L ++DRIWA+GGRLA L++R            D   I+    
Sbjct: 475  YEALNTLGNTKWRINKKILTVVDRIWANGGRLAGLIDREDEPLPEELETEDENEIKKWKW 534

Query: 2097 XXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSD 1918
                  KENSERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHPHLNHLGSD
Sbjct: 535  KVKNVKKENSERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPHLNHLGSD 594

Query: 1917 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRP 1738
            +CRGILEFAEGRPLGKSG RWLKIHLAN+YAGGVDK SYEGR+AFTEN+LD IFDSADRP
Sbjct: 595  MCRGILEFAEGRPLGKSGFRWLKIHLANVYAGGVDKLSYEGRVAFTENHLDYIFDSADRP 654

Query: 1737 LEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDK 1558
            LEG+RWWL AEDPFQCL+ C ++ EA RSSSPE  +SH+P+HQDGSCNGLQHYAALGRDK
Sbjct: 655  LEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSCNGLQHYAALGRDK 714

Query: 1557 LGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQ 1378
            LGA AVNL++G+KPADVYSGIAARVL+IMR DA+KDP T P AL AKLL+++VDRKLVKQ
Sbjct: 715  LGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAKLLINEVDRKLVKQ 774

Query: 1377 TVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIM 1198
            TVMTSVYGVTYIGARDQIK+RLKER+A+ADD  L++A+CYAAKTT+ ALEEMF+ AR IM
Sbjct: 775  TVMTSVYGVTYIGARDQIKRRLKERDAVADDPSLYAASCYAAKTTLMALEEMFEGARSIM 834

Query: 1197 DWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQ 1018
             WLG+CAK+IAS+N+ V+WTTPLGLPVVQPYR +GR L+KTSLQ+L L+ +TDK+MV+RQ
Sbjct: 835  AWLGECAKVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKRQ 894

Query: 1017 RTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELY 838
            RTAFPPNFVHSLDGSHMMMTA+ACK AGLNFAGVHDSYWTHACDV++MNRILRE FVELY
Sbjct: 895  RTAFPPNFVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELY 954

Query: 837  EQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            E PILENLLE F+KSFP L+FPPLP+RGDFDLR+VLESPYFFN
Sbjct: 955  EAPILENLLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score = 1282 bits (3317), Expect = 0.0
 Identities = 637/879 (72%), Positives = 734/879 (83%), Gaps = 2/879 (0%)
 Frame = -2

Query: 3339 DDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAR 3160
            D DE +E++ E +K        L+ K+P + + GM   KYN+L++RQIK+ET+AW +AA+
Sbjct: 120  DIDEIQELIEEMNKENEALKTNLQPKQPKT-VGGMGIGKYNLLRRRQIKVETEAWEDAAK 178

Query: 3159 EYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQL 2980
            EYQELL DMCEQ+LAPNLPY+KSLFLGWFEPL++AI AEQ+L    GKN+  YAP+FDQL
Sbjct: 179  EYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAYAPFFDQL 237

Query: 2979 PADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSKGNSXXXX 2800
            PA+MMAVITMHKL  LLM+G G+G+A VVQAA  IGEAIE E +I RFLEK+K N+    
Sbjct: 238  PAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGS 297

Query: 2799 XXXXXXXXXXXXXXXK--VTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLL 2626
                           +  V  L+KKQ ++QVRKIVK  DD KPWGQDN VKVG KLI +L
Sbjct: 298  LEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCKLIQIL 357

Query: 2625 TETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTA 2446
             ETAYIQPP DQ  D P DIRPAF+HT KT   E+ KG  RRYGVI+CDPLVR+GL+KTA
Sbjct: 358  IETAYIQPPNDQLDDCPPDIRPAFMHTLKTV--ETVKG-SRRYGVIQCDPLVRKGLDKTA 414

Query: 2445 RHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEAL 2266
            RHMVIPYMPMLVPP NW+GY++GA+LFLPSYIMRTHGAKQQR+A K + K+ L  VF+AL
Sbjct: 415  RHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQAL 474

Query: 2265 DTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXX 2086
            DTLGNTKWR+NK+VL I+DRIWASGGRLADLV+R            D   I+        
Sbjct: 475  DTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTEDEEEIKKWKWKVKA 534

Query: 2085 XXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 1906
              KEN ERHSQRCD ELKL+VARKMK+E+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 535  AKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 594

Query: 1905 ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQ 1726
            ILEF+EGRPLGKSGLRWLKIHLAN+Y GGVDK SYEGR AF+EN++++IFDSADRPLEG+
Sbjct: 595  ILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADRPLEGR 654

Query: 1725 RWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAE 1546
            RWWL AEDPFQCL+ CI+I+EALRS SPE  +SH+P+HQDGSCNGLQHYAALGRDKLGA 
Sbjct: 655  RWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAA 714

Query: 1545 AVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMT 1366
            AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+T+P  + A+LL++QVDRKLVKQTVMT
Sbjct: 715  AVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMT 774

Query: 1365 SVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLG 1186
            SVYGVTYIGARDQIK+RLKER AI DD ELFSAACYAAKTT+TAL EMF+AAR IM WLG
Sbjct: 775  SVYGVTYIGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWLG 834

Query: 1185 DCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAF 1006
            DCAKIIA +N+ VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVMV+RQRTAF
Sbjct: 835  DCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAF 894

Query: 1005 PPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPI 826
            PPNFVHSLDGSHMMMTAI CK+AGL+FAGVHDSYWTHA DV+ MN+ILREKFVELY+ PI
Sbjct: 895  PPNFVHSLDGSHMMMTAITCKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPI 954

Query: 825  LENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            LENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 955  LENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score = 1278 bits (3307), Expect = 0.0
 Identities = 669/1007 (66%), Positives = 768/1007 (76%), Gaps = 24/1007 (2%)
 Frame = -2

Query: 3657 MWRNASK---SQLLRNIKLSAQLKPSSYATRFKE--PSQCI---SKFRPLLGYNSRFSFV 3502
            MWR  SK   S+  RN   SA L  S Y++ F +  P QC+   S   P LG +    F 
Sbjct: 1    MWRYISKQAYSRKFRNSHDSALLGFSQYSSSFGKTRPLQCLCEESTTNPNLGLSQNSIFS 60

Query: 3501 GFGRNAELLYQNNESGSF--HFMFSTNPF-----------GISGLYNQPTCCCYXXXXXX 3361
               R    L    E  S   H   S N             G  G  +      Y      
Sbjct: 61   RISRKVRHLEGICEESSKNPHLGLSQNSLFSSVKGDFRVCGKRGSGSLGFLRSYGSAAEA 120

Query: 3360 XXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETD 3181
                  ED DE +E++ E +K        L+ K+P + I GM   KYN+L++RQIK+ET+
Sbjct: 121  IASTSEEDTDEIQELIEEMNKENEALKTNLQPKQPKT-IGGMGVGKYNLLRRRQIKVETE 179

Query: 3180 AWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHY 3001
            AW EAA+EYQELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI AEQ+L    GKN+   
Sbjct: 180  AWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDE-GKNRGAC 238

Query: 3000 APYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK 2821
            AP+FDQLPA+MMAVITMHKL   LM+G G G+A VVQAA  IGEAIE E +I RFLEK+K
Sbjct: 239  APFFDQLPAEMMAVITMHKLMGWLMTGGGTGSARVVQAASHIGEAIEHEARIHRFLEKTK 298

Query: 2820 GN---SXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKV 2650
             +   S                   KV  L+KKQ ++QVRKIVK  DD KPWGQDN VKV
Sbjct: 299  KSNALSGDLEDTPGDIMKERERVRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKV 358

Query: 2649 GGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLV 2470
            G +LI +L ETAYIQPP DQ  D P DIRPAF+HT KT   E+ KG  RRYGVI+CDPLV
Sbjct: 359  GCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKTV--ETMKG-SRRYGVIQCDPLV 415

Query: 2469 RQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRN 2290
            R+GL+KTARHMVIPYMPMLVPP +W GY+KGA+LFLPSYIMRTHGAKQQR+A K + K+ 
Sbjct: 416  RKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQ 475

Query: 2289 LNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIR 2110
            L  VF+ALDTLGNTKWR+N+KVL I+DRIWASGGRLADLV+R            D A IR
Sbjct: 476  LEPVFQALDTLGNTKWRLNRKVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIR 535

Query: 2109 XXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNH 1930
                      KEN ERHSQRCD ELKL+VARKMK+EDGFYYPHNLDFRGRAYPMHP+LNH
Sbjct: 536  KWKWKVKGVKKENCERHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNH 595

Query: 1929 LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDS 1750
            LGSDLCRGILEFAEGRPLGKSGLRWLKIHLAN+Y GGVDK SYEGR+AF+EN++++IFDS
Sbjct: 596  LGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDS 655

Query: 1749 ADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAAL 1570
            A+RPLEG+RWWL AEDPFQCL+ CI+I EALRS SPE  +S++P+HQDGSCNGLQHYAAL
Sbjct: 656  AERPLEGKRWWLGAEDPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAAL 715

Query: 1569 GRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRK 1390
            GRD LGA AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+ +P  + A+LL++QVDRK
Sbjct: 716  GRDTLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRK 775

Query: 1389 LVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAA 1210
            LVKQTVMTSVYGVTYIGARDQIK+RLKER  I DD ELF+AACYAAKTT+TAL EMF+AA
Sbjct: 776  LVKQTVMTSVYGVTYIGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAA 835

Query: 1209 RDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVM 1030
            R IM WLGDCAKIIA +N  VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVM
Sbjct: 836  RSIMSWLGDCAKIIAMENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVM 895

Query: 1029 VRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKF 850
            V+RQRTAFPPNFVHSLDGSHMMMTAIACK++GL+FAGVHDSYWTHA DV+ MN+ILREKF
Sbjct: 896  VKRQRTAFPPNFVHSLDGSHMMMTAIACKESGLSFAGVHDSYWTHASDVDQMNKILREKF 955

Query: 849  VELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            VELY+ PILENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 956  VELYDAPILENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 1002


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score = 1278 bits (3306), Expect = 0.0
 Identities = 634/879 (72%), Positives = 733/879 (83%), Gaps = 2/879 (0%)
 Frame = -2

Query: 3339 DDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAR 3160
            D DE +E++ E +K        L+ K+P + + GM   KYN+L++RQIK+ET+AW +AA+
Sbjct: 120  DIDEIQELIEEMNKENEALKTNLQPKQPKT-VGGMGIGKYNLLRRRQIKVETEAWEDAAK 178

Query: 3159 EYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQL 2980
            EYQELL DMCEQ+LAPNLPY+KSLFLGWFEPLK+AI AEQ+L    GKN+  YAP+FDQL
Sbjct: 179  EYQELLMDMCEQKLAPNLPYIKSLFLGWFEPLKDAIAAEQKLCDE-GKNRGAYAPFFDQL 237

Query: 2979 PADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSKGNSXXXX 2800
            PA+MMAVITMHKL  LLM+G G+G+A VVQAA  IGEAIE E +I RFLEK+K N+    
Sbjct: 238  PAEMMAVITMHKLMGLLMTGGGSGSARVVQAASHIGEAIEHEARIHRFLEKTKKNALDGS 297

Query: 2799 XXXXXXXXXXXXXXXK--VTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLL 2626
                           +  V  L+KKQ ++QVRKIVK  DD KPWGQDN VKVG +LI +L
Sbjct: 298  LEETAGDIMKERERLRKKVKILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQIL 357

Query: 2625 TETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTA 2446
             ETAYIQPP DQ  D P DIRPAF+HT KT   ++ KG  RRYGVI+CDPLVR+GL+KTA
Sbjct: 358  IETAYIQPPNDQLEDCPPDIRPAFMHTLKTV--DTVKG-SRRYGVIQCDPLVRKGLDKTA 414

Query: 2445 RHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEAL 2266
            RHMVIPYMPMLVPP NW+GY++GA+LFLPSYIMRTHGAKQQR+A K + K+ L  VF+AL
Sbjct: 415  RHMVIPYMPMLVPPQNWSGYDRGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQAL 474

Query: 2265 DTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXX 2086
            DTLGNTKWR+NK+VL I+DRIWASGGRLADLV+R            +   I+        
Sbjct: 475  DTLGNTKWRVNKRVLGILDRIWASGGRLADLVDREDVPLPEEPDTENEEEIKKWKWKVKA 534

Query: 2085 XXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRG 1906
              KEN ERHSQRCD ELKL+VARKMK+E+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG
Sbjct: 535  AKKENCERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG 594

Query: 1905 ILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQ 1726
            ILEF+EGRPLGKSGLRWLKIHLAN+Y GGVDK S EGR AF+EN++++IFDSADRPLEG+
Sbjct: 595  ILEFSEGRPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSADRPLEGR 654

Query: 1725 RWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAE 1546
            RWWL AEDPFQCL+ CI I+EALRS SPE  +SH+P+HQDGSCNGLQHYAALGRDKLGA 
Sbjct: 655  RWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAA 714

Query: 1545 AVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMT 1366
            AVNL+AGDKPADVYSGIAARVL+IM+RDA KDP+T+P  + A+LL++QVDRKLVKQTVMT
Sbjct: 715  AVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMT 774

Query: 1365 SVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLG 1186
            SVYGVTYIGARDQIK+RLKER AI DD ELF+AACYAAKTT+TAL EMF+AAR IM WLG
Sbjct: 775  SVYGVTYIGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLG 834

Query: 1185 DCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAF 1006
            DCAKIIA +N+ VRWTTPLGLPVVQPYR +GR L+KTSLQ+LTL+ +TDKVMV+RQRTAF
Sbjct: 835  DCAKIIAMENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAF 894

Query: 1005 PPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPI 826
            PPNFVHSLDGSHMMMTAIACK+AGL+FAGVHDSYWTHA DV+ MN+ILREKFVELY+ PI
Sbjct: 895  PPNFVHSLDGSHMMMTAIACKEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPI 954

Query: 825  LENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            LENLLESF++SFP LQFPPLPERGDFDLREVLESPYFFN
Sbjct: 955  LENLLESFQQSFPDLQFPPLPERGDFDLREVLESPYFFN 993


>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
            gi|550332836|gb|EEE88785.2| hypothetical protein
            POPTR_0008s11200g [Populus trichocarpa]
          Length = 988

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 645/1001 (64%), Positives = 763/1001 (76%), Gaps = 18/1001 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQ----LKPSSYATRFKEPS--QCISKFRPLLGYNSRFSFVGF 3496
            MWR  +K    + +K  +      K S++    + P   +C+         NS FSF+  
Sbjct: 1    MWRTLAKCSPSKQLKFPSNSSNFFKDSTFIENIRSPDAKKCL---------NSAFSFL-C 50

Query: 3495 GRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDENREV 3316
             R   +  QN++  +  F   T PF +S  + +                      ++ + 
Sbjct: 51   SRQIGVFPQNDKLCNSSFGDLTKPFDLSPFFFKGYATAAAADVIPSNDESDLSGSDDFQG 110

Query: 3315 LGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLAD 3136
            L E      +   P  R +   M++GM   KY +LK+RQIK+ET+AW +AA+EYQE+L D
Sbjct: 111  LMEQVNKHFQKMEPQFRPQEKKMVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLED 170

Query: 3135 MCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVI 2956
            MCEQ+LAPNLPY+KSLFLGWFEPL++AI AEQEL K     +V +  +F  LPADMMAVI
Sbjct: 171  MCEQKLAPNLPYVKSLFLGWFEPLRDAIVAEQELCKR--NLRVSHRAHFSDLPADMMAVI 228

Query: 2955 TMHKLTSLLMSGSGNGTAT-VVQAACQIGEAIEQEVKIRRFLEKSK-----------GNS 2812
            TMHKL  LLM+G+G   +  VVQAA  +GEAIE E +I +FLEK+K           G S
Sbjct: 229  TMHKLMGLLMTGNGGSASIRVVQAASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGES 288

Query: 2811 XXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIH 2632
                               KVT L+KKQ V+QVR+IVKGHDD +PWGQ+  VKVG +LI 
Sbjct: 289  DAAIEEGEKLSKEQEKLRKKVTTLIKKQKVQQVRRIVKGHDDSRPWGQEEHVKVGSRLIQ 348

Query: 2631 LLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEK 2452
            L+ ETAYIQPP+DQ  DGP DIRPAF+HT KT +K+++K   RRYGVIECDPLVR+GLEK
Sbjct: 349  LMIETAYIQPPIDQIGDGPPDIRPAFVHTLKTITKDTQKS-SRRYGVIECDPLVRKGLEK 407

Query: 2451 TARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFE 2272
            +ARHMVIPYMPMLVPPLNWTGY++GAHLFLPSY+MR HG+KQQRDA K  ++  L  VF+
Sbjct: 408  SARHMVIPYMPMLVPPLNWTGYDQGAHLFLPSYVMRIHGSKQQRDAVKRASRNQLEPVFK 467

Query: 2271 ALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXX 2092
            ALDTLGNTKWRINK+VL ++DRIWASGG LA LV+R            D A IR      
Sbjct: 468  ALDTLGNTKWRINKRVLVVVDRIWASGGHLAGLVDREDAPLPEEPQTEDEAEIRKWTWKV 527

Query: 2091 XXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLC 1912
                KENSERHSQRCD ELKL+VARKMK+E+GFYYPHNLDFRGRAYPMHP+LNHLGSD+C
Sbjct: 528  RSVKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVC 587

Query: 1911 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLE 1732
            RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDK SY+GRI+FTEN+LD+IFDSAD+PLE
Sbjct: 588  RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISFTENHLDDIFDSADQPLE 647

Query: 1731 GQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLG 1552
            G+RWWL AEDPFQCL+ACI+++EALRS SPE   SH PVHQDGSCNGLQHYAALGRDKLG
Sbjct: 648  GRRWWLGAEDPFQCLAACINLSEALRSPSPETATSHTPVHQDGSCNGLQHYAALGRDKLG 707

Query: 1551 AEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTV 1372
            A AVNL+ G+KPADVYSGIA RVL+IM+RDA+KDP+  P ++ AKLL++QVDRKLVKQTV
Sbjct: 708  AAAVNLVGGEKPADVYSGIATRVLDIMQRDAEKDPAINPNSVHAKLLVNQVDRKLVKQTV 767

Query: 1371 MTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDW 1192
            MTSVYGVTYIGARDQIK+RLKER  IADD +L+SAACYAAKTT+ ALEEMF+ AR IM W
Sbjct: 768  MTSVYGVTYIGARDQIKRRLKERCIIADDPQLYSAACYAAKTTLMALEEMFEGARGIMAW 827

Query: 1191 LGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRT 1012
            LG+CAK+IAS+N+ VRWTTPLGLPVVQPYR +GR L+KTSLQVLTL+ +TDKVMV+RQRT
Sbjct: 828  LGECAKVIASENQPVRWTTPLGLPVVQPYRQLGRHLIKTSLQVLTLKRETDKVMVKRQRT 887

Query: 1011 AFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQ 832
            AFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDV++MNRILREKFVELYE 
Sbjct: 888  AFPPNFVHSLDGSHMMMTAVACKEAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEA 947

Query: 831  PILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            PILENLLESF+ SFP L+FPPLPERG FDL++VL S YFFN
Sbjct: 948  PILENLLESFQSSFPNLKFPPLPERGVFDLKDVLRSTYFFN 988


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 996

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 654/1003 (65%), Positives = 762/1003 (75%), Gaps = 20/1003 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKP------SSYATRFKEPSQCISKFRPLLGYNSRFS---F 3505
            MWR+  K    R  K     +P      S  AT F + S   +K R      + F    F
Sbjct: 1    MWRSLVKQAAYRE-KFKFVAEPYTCSLSSCSATGFSQDSVFANKVRASEARANGFYGCLF 59

Query: 3504 VGFGRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDEN 3325
             GF +      Q ++ G F      +P   SG +                       +E 
Sbjct: 60   PGFRQIGVFSSQKDDLGKFSLNQPGDPLRFSGKFWNLKGYASAAEAVISTEEDMSGSEEI 119

Query: 3324 REVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQEL 3145
             E++   ++ E K    ++ KK   +  GM   KYN LKKRQIKIET+AW EAA+EYQEL
Sbjct: 120  HELMEAMAREEKKMSFLVQPKK---VAEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQEL 176

Query: 3144 LADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMM 2965
            L DMCE +LAPNLPY+KSLFLGWFEPL+++I  EQEL K     ++ +A YF++L ADMM
Sbjct: 177  LMDMCEHKLAPNLPYIKSLFLGWFEPLRDSIVGEQELCKE--NCRISHAAYFNELSADMM 234

Query: 2964 AVITMHKLTSLLMSGS-GNGTATVVQAACQIGEAIEQEVKIRRFLEKSK----------G 2818
            AV+TMHKL  LLM+ + G G   VVQAACQIGEAIE E KI+ FL K+K          G
Sbjct: 235  AVVTMHKLMGLLMTNTAGTGGIRVVQAACQIGEAIEHEAKIQSFLGKTKKKKTTDKKPDG 294

Query: 2817 NSXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKL 2638
             S                   KVT LLKKQ V QVRKIVKGHD  K WGQ+  VKVG +L
Sbjct: 295  ESEPVTNKQEKLVKDQEKLRKKVTQLLKKQKVHQVRKIVKGHDTSKSWGQEAHVKVGCRL 354

Query: 2637 IHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGL 2458
            I LL E AYIQPP+DQ  D P DIRPAF+H+ KT +K+  KG  RRYGVIECD LVR+GL
Sbjct: 355  IQLLIENAYIQPPVDQLGDCPPDIRPAFVHSLKTITKDGNKG-SRRYGVIECDLLVRKGL 413

Query: 2457 EKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAV 2278
            EKTARHMVIPYMPMLVPP NWTGY++GA+LFLPSY+MRTHGAKQQR+  K   ++ L  +
Sbjct: 414  EKTARHMVIPYMPMLVPPQNWTGYDRGAYLFLPSYVMRTHGAKQQRETVKRTPRKQLEPI 473

Query: 2277 FEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXX 2098
            FEALDTLGNTKWRINK+VL ++DR+WA+GGR+A LV+R            D A I+    
Sbjct: 474  FEALDTLGNTKWRINKRVLGVVDRLWANGGRVASLVDREDVPLPEKPDTEDEAEIQKWKW 533

Query: 2097 XXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSD 1918
                  K+N+ERHS RCD ELKL+VARKM++EDGFYYPHNLDFRGRAYPMHP+LNHLGSD
Sbjct: 534  KVKAANKQNNERHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSD 593

Query: 1917 LCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRP 1738
            LCRG+LEFAEGRPLGKSGLRWLKIHLANLYAGGVDK SYEGRIAFTEN+LD+IFDSADRP
Sbjct: 594  LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRP 653

Query: 1737 LEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDK 1558
            LEG+RWWL+AEDPFQCL+ACI+++EALRSSSPE  +SH+PVHQDGSCNGLQHYAALGRDK
Sbjct: 654  LEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDK 713

Query: 1557 LGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQ 1378
            LGA +VNL+AG+KPADVYSGIAARV++IMRRDA+KDP+  P AL A+LL++QVDRKLVKQ
Sbjct: 714  LGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQ 773

Query: 1377 TVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIM 1198
            TVMTSVYGVTYIGARDQIK+RLKER AIADD E+F A+CYAA+TT+TAL EMFQAAR IM
Sbjct: 774  TVMTSVYGVTYIGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAARSIM 833

Query: 1197 DWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQ 1018
            +WLG+CAK+I+S+N+ VRW TPLGLPVVQPYR +GR L+KTSLQVLTL+ +TDKVM +RQ
Sbjct: 834  NWLGECAKVISSENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQ 893

Query: 1017 RTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELY 838
            RTAFPPNFVHSLDGSHMMMTA+ACK+AGLNFAGVHDSYWTHACDV++MNRILREKFVELY
Sbjct: 894  RTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELY 953

Query: 837  EQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            E PILENLLESF+KSFP+L FPPLPERGDFDLREVLESPYFFN
Sbjct: 954  EAPILENLLESFQKSFPSLNFPPLPERGDFDLREVLESPYFFN 996


>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like [Citrus
            sinensis]
          Length = 980

 Score = 1266 bits (3277), Expect = 0.0
 Identities = 643/995 (64%), Positives = 755/995 (75%), Gaps = 12/995 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKPSSYATRFKEPSQCISKFRPLLGYNSRFSFVGFGRNAEL 3478
            MWRN ++    RN K S      S  T F +    I+        +S    +GF R + L
Sbjct: 1    MWRNLARQSSTRNFKFSPS--KVSQTTNFLKK---ITSLETQTLLDSSCPLLGFRRTSFL 55

Query: 3477 LYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDENREVLGETSK 3298
              Q +  G  +F  S  PFG+    +  +                   +E +E++ + ++
Sbjct: 56   SSQKSNLGQSNFTQSIYPFGVLTSRSYASAA-----EAIASESELSGSEEVQELIDQFNE 110

Query: 3297 --LETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLADMCEQ 3124
              +   +   +  K+P    +GM + KY +LK+RQIKIET+AW +AA+EYQ+LLADMCEQ
Sbjct: 111  KGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCEQ 170

Query: 3123 RLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVITMHK 2944
            +LAPNLPY+KSLFLGWFEPL++AI  +Q   +   K+   YAPYF+ LPADMMAVITMHK
Sbjct: 171  KLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMT-YAPYFNNLPADMMAVITMHK 229

Query: 2943 LTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK----------GNSXXXXXX 2794
            L  LLM+ +G     VVQAACQIGEAIE E +IR F E +K          G+S      
Sbjct: 230  LVGLLMTNAGE--VRVVQAACQIGEAIENEARIRSFFESTKKKNATDNNLEGDSEPVTND 287

Query: 2793 XXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTETA 2614
                         +VT+L+KKQ ++QVR IVKGH DLKPWGQD  VKVG +LI LL ETA
Sbjct: 288  PEKLIKEQDKLKKRVTSLIKKQKLRQVRGIVKGHVDLKPWGQDALVKVGCRLIQLLMETA 347

Query: 2613 YIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTARHMV 2434
            YIQPP+DQ  D P DIRPAF+HT K+F+KE+ KG  RRYGVIECDPLVR+GLEKT RHM+
Sbjct: 348  YIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKG--RRYGVIECDPLVRKGLEKTGRHMI 405

Query: 2433 IPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEALDTLG 2254
            IPYMPMLVPPLNW GYN+G H FLPSY+MRTHGA+QQR+  K   +  L  VF+ALDTLG
Sbjct: 406  IPYMPMLVPPLNWRGYNRGGHFFLPSYVMRTHGARQQRETIKMTPRSQLEPVFQALDTLG 465

Query: 2253 NTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXXKE 2074
            +TKWR+NK++L +IDR+WASGG LA LV++            D   I+          K+
Sbjct: 466  STKWRVNKRILGVIDRMWASGGCLAGLVDQEDVPLPEKPDTDDETEIKKWKWKVKTAKKQ 525

Query: 2073 NSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF 1894
            NSE+HSQRCD ELKLSVARKMK+E+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF
Sbjct: 526  NSEKHSQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 585

Query: 1893 AEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRWWL 1714
             EG PLGKSGL WLKIHLANLYAGGVDK SYEGR+AFTEN+LD+IFDSADRPLEG+RWWL
Sbjct: 586  EEGCPLGKSGLHWLKIHLANLYAGGVDKLSYEGRVAFTENHLDDIFDSADRPLEGRRWWL 645

Query: 1713 NAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAVNL 1534
             AEDPFQCL+ CI+++EALRS SPE  +SHIPVH DGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 646  GAEDPFQCLATCINLSEALRSPSPESTISHIPVHMDGSCNGLQHYAALGRDKLGAAAVNL 705

Query: 1533 IAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSVYG 1354
            + GDKPADVYSGIAARVLEIMR DA KDP+T P A  A+LL++QVDRKLVKQTVMTSVYG
Sbjct: 706  VGGDKPADVYSGIAARVLEIMRADADKDPATYPYASCARLLINQVDRKLVKQTVMTSVYG 765

Query: 1353 VTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLGDCAK 1174
            VTYIGARDQIKKRLKER AI DD++LF AACYAAKTT+TAL EMF+AAR IM WLG+CAK
Sbjct: 766  VTYIGARDQIKKRLKERCAIEDDSKLFGAACYAAKTTLTALGEMFEAARSIMSWLGECAK 825

Query: 1173 IIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPPNF 994
            +IAS+N+AVRWTTPLGLPVVQPY  +GR L++TSLQ L L+ +TDKVMV+RQRTAFPPNF
Sbjct: 826  VIASENQAVRWTTPLGLPVVQPYHQLGRHLIRTSLQTLALQRETDKVMVKRQRTAFPPNF 885

Query: 993  VHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPILENL 814
            VHSLDGSHMMMTA+ACK+AGL+FAGVHDSYWTHACDV+ MNRILREKFVELYEQPILE+L
Sbjct: 886  VHSLDGSHMMMTAVACKRAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEQPILEDL 945

Query: 813  LESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            L SF+K FP L FPPLPERGDFDLR+VLESPYFFN
Sbjct: 946  LASFQKQFPKLNFPPLPERGDFDLRDVLESPYFFN 980


>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
            gi|557540028|gb|ESR51072.1| hypothetical protein
            CICLE_v10030633mg [Citrus clementina]
          Length = 980

 Score = 1266 bits (3277), Expect = 0.0
 Identities = 643/995 (64%), Positives = 755/995 (75%), Gaps = 12/995 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKPSSYATRFKEPSQCISKFRPLLGYNSRFSFVGFGRNAEL 3478
            MWRN ++    RN K S      S  T F +    I+        +S    +GF R + L
Sbjct: 1    MWRNLARQSSTRNFKFSPS--KVSQTTNFLKK---ITSLETQTLLDSSCPLLGFRRTSFL 55

Query: 3477 LYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDENREVLGETSK 3298
              Q +  G  +F  S  PFG+    +  +                   +E +E++ + ++
Sbjct: 56   SSQKSNLGQSNFTQSIYPFGVLTSRSYASAA-----EAIASESELSGSEEVQELIDQFNE 110

Query: 3297 --LETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLADMCEQ 3124
              +   +   +  K+P    +GM + KY +LK+RQIKIET+AW +AA+EYQ+LLADMCEQ
Sbjct: 111  KGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCEQ 170

Query: 3123 RLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVITMHK 2944
            +LAPNLPY+KSLFLGWFEPL++AI  +Q   +   K+   YAPYF+ LPADMMAVITMHK
Sbjct: 171  KLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMT-YAPYFNNLPADMMAVITMHK 229

Query: 2943 LTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK----------GNSXXXXXX 2794
            L  LLM+ +G     VVQAACQIGEAIE E +IR F E +K          G+S      
Sbjct: 230  LVGLLMTNAGE--VRVVQAACQIGEAIENEARIRSFFESTKKKNATDNNLEGDSEPVTND 287

Query: 2793 XXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTETA 2614
                         +VT+L+KKQ ++QVR IVKGH DLKPWGQD  VKVG +LI LL ETA
Sbjct: 288  PEKLIKEQEKLKKRVTSLIKKQKLRQVRGIVKGHVDLKPWGQDALVKVGCRLIQLLMETA 347

Query: 2613 YIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEKTARHMV 2434
            YIQPP+DQ  D P DIRPAF+HT K+F+KE+ KG  RRYGVIECDPLVR+GLEKT RHM+
Sbjct: 348  YIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKG--RRYGVIECDPLVRKGLEKTGRHMI 405

Query: 2433 IPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFEALDTLG 2254
            IPYMPMLVPPLNW GYN+G H FLPSY+MRTHGA+QQR+  K   +  L  VF+ALDTLG
Sbjct: 406  IPYMPMLVPPLNWRGYNRGGHFFLPSYVMRTHGARQQRETIKMTPRSQLEPVFQALDTLG 465

Query: 2253 NTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXXKE 2074
            +TKWR+NK++L +IDR+WASGG LA LV++            D   I+          K+
Sbjct: 466  STKWRVNKRILGVIDRMWASGGCLAGLVDQEDVPLPEKPDTDDETEIKKWKWKVKTAKKQ 525

Query: 2073 NSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEF 1894
            NSE+HSQRCD ELKLSVARKMK+E+GFYYPHNLDFRGRAYPMHP+LNHLGSDLCRGILEF
Sbjct: 526  NSEKHSQRCDIELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF 585

Query: 1893 AEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRWWL 1714
             EG PLGKSGL WLKIHLANLYAGGVDK SYEGR+AFTEN+LD+IFDSADRPLEG+RWWL
Sbjct: 586  EEGCPLGKSGLHWLKIHLANLYAGGVDKLSYEGRVAFTENHLDDIFDSADRPLEGRRWWL 645

Query: 1713 NAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAVNL 1534
             AEDPFQCL+ CI+++EALRS SPE  +SHIPVH DGSCNGLQHYAALGRDKLGA AVNL
Sbjct: 646  GAEDPFQCLATCINLSEALRSPSPESTISHIPVHMDGSCNGLQHYAALGRDKLGAAAVNL 705

Query: 1533 IAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSVYG 1354
            + GDKPADVYSGIAARVLEIMR DA KDP+T P A  A+LL++QVDRKLVKQTVMTSVYG
Sbjct: 706  VGGDKPADVYSGIAARVLEIMRADADKDPATYPYASCARLLINQVDRKLVKQTVMTSVYG 765

Query: 1353 VTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDWLGDCAK 1174
            VTYIGARDQIKKRLKER AI DD++LF AACYAAKTT+TAL EMF+AAR IM WLG+CAK
Sbjct: 766  VTYIGARDQIKKRLKERCAIEDDSKLFGAACYAAKTTLTALGEMFEAARSIMSWLGECAK 825

Query: 1173 IIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPPNF 994
            +IAS+N+AVRWTTPLGLPVVQPY  +GR L++TSLQ L L+ +TDKVMV+RQRTAFPPNF
Sbjct: 826  VIASENQAVRWTTPLGLPVVQPYHQLGRHLIRTSLQTLALQRETDKVMVKRQRTAFPPNF 885

Query: 993  VHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQPILENL 814
            VHSLDGSHMMMTA+ACK+AGL+FAGVHDSYWTHACDV+ MNRILREKFVELYEQPILE+L
Sbjct: 886  VHSLDGSHMMMTAVACKRAGLSFAGVHDSYWTHACDVDQMNRILREKFVELYEQPILEDL 945

Query: 813  LESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            L SF+K FP L FPPLPERGDFDLR+VLESPYFFN
Sbjct: 946  LASFQKQFPKLNFPPLPERGDFDLRDVLESPYFFN 980


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1266 bits (3277), Expect = 0.0
 Identities = 648/1008 (64%), Positives = 760/1008 (75%), Gaps = 11/1008 (1%)
 Frame = -2

Query: 3699 PWIFPSTTISAT*KMWRNASKSQLLRNIKLSAQLKPSSYATRFK-----EPSQCISKFRP 3535
            P IF       +  +WRN +K  + R  K    +   S++  +      + S     F+P
Sbjct: 22   PLIFHKNPSMISTTVWRNFAKQAISR--KQRFHINSQSFSRAYSLLGICQESVFPGNFKP 79

Query: 3534 --LLGYNS-RFSFVGFGRNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXX 3364
              L   +S RFS VGF     +    +      F    NP   +G   +           
Sbjct: 80   FELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSS 139

Query: 3363 XXXXXXXEDDDENREVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIET 3184
                      DE +E+L + S +E K     +++   +   GM   KY++LK+RQIKIET
Sbjct: 140  TDVEEEVSVVDEVQELLQQMS-IEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIET 198

Query: 3183 DAWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVH 3004
            +AW  AA+EY+EL+ DMCEQ+LAPNLPYMKSLFLGWFEPL+ AI+ EQ+L +  GKNK  
Sbjct: 199  EAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRK-GKNKTA 257

Query: 3003 YAPYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLE-- 2830
            YAPY DQLPADMM+VITMHKL  LLM+G  +GT  VV AAC IGEAIEQEV+I +FLE  
Sbjct: 258  YAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEMT 317

Query: 2829 -KSKGNSXXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVK 2653
             K K +                    KVTNL+KKQ +K VR IV  HD  K W  + + K
Sbjct: 318  RKKKVDKDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEARAK 377

Query: 2652 VGGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPL 2473
            VG +LI LLT+TA+IQPP DQ ADGP DIRPAF+HT +T +K++K    RRYGVIECDPL
Sbjct: 378  VGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNA-SRRYGVIECDPL 436

Query: 2472 VRQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKR 2293
            V +GLEKTARHMVIPYMPMLVPPLNWTGY+KG + FLPSY+MR HGA+QQR+A K   + 
Sbjct: 437  VLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTPRE 496

Query: 2292 NLNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAI 2113
             L  VF+ALD LGNT+WR+NK+VL+++DRIWASGG LADLV+R            D   +
Sbjct: 497  QLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDETLL 556

Query: 2112 RXXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLN 1933
            +          KEN ERHSQRCDTELKL+VARKMK+E+GFYYPHNLDFRGRAYPMHP+LN
Sbjct: 557  KKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 616

Query: 1932 HLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFD 1753
            HLGSD+CRGILEF EGRPLGKSGL WLKIHLANLYAGGVDK S EGRIAFTEN+LD+IFD
Sbjct: 617  HLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDIFD 676

Query: 1752 SADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAA 1573
            S D+PLEG+RWWL AEDPFQCL+ CI++ EALRSSSPE F+SHIPVHQDGSCNGLQHYAA
Sbjct: 677  SVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHYAA 736

Query: 1572 LGRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDR 1393
            LGRDKLGA +VNL+ G+KPADVYSGIA RVLEIMRRDAQKDP   P+AL AKLL++QVDR
Sbjct: 737  LGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQVDR 796

Query: 1392 KLVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQA 1213
            KLVKQTVMTSVYGVTYIGARDQIK+RLKER +I+DDAE+F  ACYAAK T+TAL EMF+A
Sbjct: 797  KLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMFEA 856

Query: 1212 ARDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKV 1033
            AR IM WLG+CAKIIAS+N+ VRWTTPLGLPVVQPYR  GR L+KTSLQVLTL+ +T+KV
Sbjct: 857  ARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETEKV 916

Query: 1032 MVRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREK 853
            MV+RQRTAFPPNFVHSLD SHMMMTAIACK+AGL+FAGVHDSYWTHACDV++MN+ILREK
Sbjct: 917  MVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILREK 976

Query: 852  FVELYEQPILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            FV+LYE PILENLLESF++SFPAL FPPLPERGDFDLR+VLESPYFFN
Sbjct: 977  FVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 1264 bits (3270), Expect = 0.0
 Identities = 655/1001 (65%), Positives = 752/1001 (75%), Gaps = 18/1001 (1%)
 Frame = -2

Query: 3657 MWRNASKSQLLRNIKLSAQLKPSSYATRFKEPSQCIS-----KFRPLLGYNSRFSFVGFG 3493
            MWRN +K  +  ++K     KP S A  F   SQ        KF  L         VG G
Sbjct: 47   MWRNVAKQAISLHLK-----KPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSG 101

Query: 3492 RNAELLYQNNESGSFHFMFSTNPFGISGLYNQPTCCCYXXXXXXXXXXXXEDDDEN---- 3325
            R  E+L   +  G   F          G+       C              D +E+    
Sbjct: 102  RIGEILNHEDYMGRTSF----------GVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIV 151

Query: 3324 ---REVLGETSKLETKNPPPLRRKKPSSMISGMSSWKYNVLKKRQIKIETDAWNEAAREY 3154
               +E+L E  K E +       +    +  GM S KY +LK RQ+KIET+AW +AA EY
Sbjct: 152  EEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLKMRQVKIETEAWEQAANEY 211

Query: 3153 QELLADMCEQRLAPNLPYMKSLFLGWFEPLKEAIEAEQELNKTAGKNKVHYAPYFDQLPA 2974
            +ELL DMCEQ+LAPNLPYMKSLFLGWFEPL++AI  EQE  + A K+KV YAPYFDQLPA
Sbjct: 212  RELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMA-KHKVAYAPYFDQLPA 270

Query: 2973 DMMAVITMHKLTSLLMSGSGNGTATVVQAACQIGEAIEQEVKIRRFLEKSK------GNS 2812
            DMMAVITMHKL  LLM+G  +G A VVQAAC IG+AIEQEV+I +FLEK+K         
Sbjct: 271  DMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLEKTKKKNETKNKE 330

Query: 2811 XXXXXXXXXXXXXXXXXXXKVTNLLKKQNVKQVRKIVKGHDDLKPWGQDNQVKVGGKLIH 2632
                               KVT+L+KKQ +  VR+IVKG DD KPWGQD + KVG ++I 
Sbjct: 331  DEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPWGQDARAKVGSRVIE 390

Query: 2631 LLTETAYIQPPLDQSADGPLDIRPAFIHTQKTFSKESKKGVHRRYGVIECDPLVRQGLEK 2452
            LLT+TAYIQ P DQ  D P DI PAF HT +T SKE+K G  ++YGVIEC+PLV +GLE+
Sbjct: 391  LLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGG-SKKYGVIECNPLVLKGLER 449

Query: 2451 TARHMVIPYMPMLVPPLNWTGYNKGAHLFLPSYIMRTHGAKQQRDAFKSIAKRNLNAVFE 2272
            TARHMVIPYMPMLVPP+ WTGY+KGAH FLPSY+MRTHGAKQQRD  K   K+ L  VFE
Sbjct: 450  TARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTVKRTPKKQLEPVFE 509

Query: 2271 ALDTLGNTKWRINKKVLNIIDRIWASGGRLADLVNRXXXXXXXXXXXXDVAAIRXXXXXX 2092
            ALDTLGNTKWR+N +VL+++DRIW+ GGRLADLV+R            D A +R      
Sbjct: 510  ALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQLRKWQWKV 569

Query: 2091 XXXXKENSERHSQRCDTELKLSVARKMKEEDGFYYPHNLDFRGRAYPMHPHLNHLGSDLC 1912
                KEN ERHSQRCD ELKLSVARKMK+E+GFYYPHN+DFRGRAYPMHP+LNHLGSDLC
Sbjct: 570  RNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYLNHLGSDLC 629

Query: 1911 RGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKFSYEGRIAFTENNLDEIFDSADRPLE 1732
            RGILEFAEGR LGKSGL WLKIHLANLYAGGVDK S+EGR+AFTEN+LD+IFDSAD+PLE
Sbjct: 630  RGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFDSADKPLE 689

Query: 1731 GQRWWLNAEDPFQCLSACIDITEALRSSSPEDFVSHIPVHQDGSCNGLQHYAALGRDKLG 1552
            G+RWWL AEDPFQCL+ CI++TEALRSSSPE F+SHIPVHQDGSCNGLQHYAALGRD LG
Sbjct: 690  GRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQHYAALGRDTLG 749

Query: 1551 AEAVNLIAGDKPADVYSGIAARVLEIMRRDAQKDPSTEPKALLAKLLLDQVDRKLVKQTV 1372
            A AVNL+A +KPADVYSGIAARVL I+RRDAQ+DP+  P AL AKLLL QVDRKLVKQTV
Sbjct: 750  AAAVNLVAREKPADVYSGIAARVLVIIRRDAQRDPAVFPDALRAKLLLSQVDRKLVKQTV 809

Query: 1371 MTSVYGVTYIGARDQIKKRLKERNAIADDAELFSAACYAAKTTMTALEEMFQAARDIMDW 1192
            MTSVYGVTYIGARDQIK+RLKER A  ++AELF A+CYAAK T+TAL EMFQAAR IM W
Sbjct: 810  MTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTALGEMFQAARGIMSW 869

Query: 1191 LGDCAKIIASDNEAVRWTTPLGLPVVQPYRSIGRRLVKTSLQVLTLRNDTDKVMVRRQRT 1012
            LG+CAKIIAS+N+ VRWTTPLGLPVVQPYR +GR  VKTSLQ+LTL+ +T+KVMV+RQRT
Sbjct: 870  LGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQRETEKVMVKRQRT 929

Query: 1011 AFPPNFVHSLDGSHMMMTAIACKQAGLNFAGVHDSYWTHACDVEDMNRILREKFVELYEQ 832
            AFPPNFVHSLDGSHMMMTA+AC++AGL FAGVHDSYWTHACDV++MNRILREKFVELYE 
Sbjct: 930  AFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMNRILREKFVELYEM 989

Query: 831  PILENLLESFKKSFPALQFPPLPERGDFDLREVLESPYFFN 709
            PILENLL+SF+KSFP L  PPLPERGDFDLREVL SPYFFN
Sbjct: 990  PILENLLDSFQKSFPKLVLPPLPERGDFDLREVLGSPYFFN 1030


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score = 1264 bits (3270), Expect = 0.0
 Identities = 613/851 (72%), Positives = 715/851 (84%), Gaps = 5/851 (0%)
 Frame = -2

Query: 3246 ISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEP 3067
            + G+   KY +L++RQI+IET+AW +AA EY+ELLADMC+Q+LAPNLPY+KSLFLGWFEP
Sbjct: 169  VHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEP 228

Query: 3066 LKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQA 2887
            L++ I AEQEL    G    H A YF+ LPADMMAVITMHKL  LLM+GSG+G+  V+QA
Sbjct: 229  LRDQIIAEQELVGERGARASH-ARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQA 287

Query: 2886 ACQIGEAIEQEVKIRRFLEKSKGNSXXXXXXXXXXXXXXXXXXXK-----VTNLLKKQNV 2722
            ACQIGEAIE EV+I +FLEK+K  S                   +     VT+L+KKQ +
Sbjct: 288  ACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKI 347

Query: 2721 KQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQ 2542
            +QVR IVK  D+ KPWGQD   KVG +LI L+ ETAYIQPP  QSADGP DIRPAF H  
Sbjct: 348  RQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEM 407

Query: 2541 KTFSKESKKGVHRRYGVIECDPLVRQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFL 2362
            +T ++E +K   RRYGVI+CDPLVRQGL++TA+HMVIPYMPML+PP++WTGY+KGAHLFL
Sbjct: 408  RTVAREQQKS-SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFL 466

Query: 2361 PSYIMRTHGAKQQRDAFKSIAKRNLNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRL 2182
            PSY+MRTHGA+QQRDA +   +  + +VFEAL+TLG+TKWR+NK+VL+I+DRIW+SGGRL
Sbjct: 467  PSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRL 526

Query: 2181 ADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEE 2002
            ADLV+R            D   ++          KENSERHSQRCD ELKL+VARKMK+E
Sbjct: 527  ADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDE 586

Query: 2001 DGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 1822
            DGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAG
Sbjct: 587  DGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAG 646

Query: 1821 GVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSP 1642
            GVDK SY+GRIAFTEN+L++IFDSADRPLEG+RWWL AEDPFQCL+ CI++TEALRS SP
Sbjct: 647  GVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSP 706

Query: 1641 EDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRD 1462
            E  +SHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+AG+KPADVY+GIA RV+EIM+ D
Sbjct: 707  ETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKND 766

Query: 1461 AQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDA 1282
            A KDP+T+P A  A+LLLDQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER+ I DD+
Sbjct: 767  ALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDS 826

Query: 1281 ELFSAACYAAKTTMTALEEMFQAARDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYR 1102
            ELFSA+CYAAK T+TAL EMFQAAR IM+WLGDCAK+IA +NE VRWTTPLGLPVVQPYR
Sbjct: 827  ELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 886

Query: 1101 SIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFA 922
             +GR L+KTSLQVLTL+ +TDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+ACK+ GLNFA
Sbjct: 887  KLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFA 946

Query: 921  GVHDSYWTHACDVEDMNRILREKFVELYEQPILENLLESFKKSFPALQFPPLPERGDFDL 742
            GVHDSYWTHACDV+ MN+ILREKFVELY+ PILENLLESF+KSFP L+FPPLPERGDFDL
Sbjct: 947  GVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDL 1006

Query: 741  REVLESPYFFN 709
             +VL SPYFFN
Sbjct: 1007 TDVLGSPYFFN 1017


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1264 bits (3270), Expect = 0.0
 Identities = 613/851 (72%), Positives = 715/851 (84%), Gaps = 5/851 (0%)
 Frame = -2

Query: 3246 ISGMSSWKYNVLKKRQIKIETDAWNEAAREYQELLADMCEQRLAPNLPYMKSLFLGWFEP 3067
            + G+   KY +L++RQI+IET+AW +AA EY+ELLADMC+Q+LAPNLPY+KSLFLGWFEP
Sbjct: 135  VHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEP 194

Query: 3066 LKEAIEAEQELNKTAGKNKVHYAPYFDQLPADMMAVITMHKLTSLLMSGSGNGTATVVQA 2887
            L++ I AEQEL    G    H A YF+ LPADMMAVITMHKL  LLM+GSG+G+  V+QA
Sbjct: 195  LRDQIIAEQELVGERGARASH-ARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQA 253

Query: 2886 ACQIGEAIEQEVKIRRFLEKSKGNSXXXXXXXXXXXXXXXXXXXK-----VTNLLKKQNV 2722
            ACQIGEAIE EV+I +FLEK+K  S                   +     VT+L+KKQ +
Sbjct: 254  ACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKI 313

Query: 2721 KQVRKIVKGHDDLKPWGQDNQVKVGGKLIHLLTETAYIQPPLDQSADGPLDIRPAFIHTQ 2542
            +QVR IVK  D+ KPWGQD   KVG +LI L+ ETAYIQPP  QSADGP DIRPAF H  
Sbjct: 314  RQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEM 373

Query: 2541 KTFSKESKKGVHRRYGVIECDPLVRQGLEKTARHMVIPYMPMLVPPLNWTGYNKGAHLFL 2362
            +T ++E +K   RRYGVI+CDPLVRQGL++TA+HMVIPYMPML+PP++WTGY+KGAHLFL
Sbjct: 374  RTVAREQQKS-SRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFL 432

Query: 2361 PSYIMRTHGAKQQRDAFKSIAKRNLNAVFEALDTLGNTKWRINKKVLNIIDRIWASGGRL 2182
            PSY+MRTHGA+QQRDA +   +  + +VFEAL+TLG+TKWR+NK+VL+I+DRIW+SGGRL
Sbjct: 433  PSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRL 492

Query: 2181 ADLVNRXXXXXXXXXXXXDVAAIRXXXXXXXXXXKENSERHSQRCDTELKLSVARKMKEE 2002
            ADLV+R            D   ++          KENSERHSQRCD ELKL+VARKMK+E
Sbjct: 493  ADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDE 552

Query: 2001 DGFYYPHNLDFRGRAYPMHPHLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAG 1822
            DGFYYPHNLDFRGRAYPMHP+LNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLANLYAG
Sbjct: 553  DGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAG 612

Query: 1821 GVDKFSYEGRIAFTENNLDEIFDSADRPLEGQRWWLNAEDPFQCLSACIDITEALRSSSP 1642
            GVDK SY+GRIAFTEN+L++IFDSADRPLEG+RWWL AEDPFQCL+ CI++TEALRS SP
Sbjct: 613  GVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSP 672

Query: 1641 EDFVSHIPVHQDGSCNGLQHYAALGRDKLGAEAVNLIAGDKPADVYSGIAARVLEIMRRD 1462
            E  +SHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+AG+KPADVY+GIA RV+EIM+ D
Sbjct: 673  ETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKND 732

Query: 1461 AQKDPSTEPKALLAKLLLDQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERNAIADDA 1282
            A KDP+T+P A  A+LLLDQVDRKLVKQTVMTSVYGVTY+GAR+QIK+RLKER+ I DD+
Sbjct: 733  ALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDS 792

Query: 1281 ELFSAACYAAKTTMTALEEMFQAARDIMDWLGDCAKIIASDNEAVRWTTPLGLPVVQPYR 1102
            ELFSA+CYAAK T+TAL EMFQAAR IM+WLGDCAK+IA +NE VRWTTPLGLPVVQPYR
Sbjct: 793  ELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYR 852

Query: 1101 SIGRRLVKTSLQVLTLRNDTDKVMVRRQRTAFPPNFVHSLDGSHMMMTAIACKQAGLNFA 922
             +GR L+KTSLQVLTL+ +TDKVMV+RQRTAFPPNFVHSLDGSHMMMTA+ACK+ GLNFA
Sbjct: 853  KLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFA 912

Query: 921  GVHDSYWTHACDVEDMNRILREKFVELYEQPILENLLESFKKSFPALQFPPLPERGDFDL 742
            GVHDSYWTHACDV+ MN+ILREKFVELY+ PILENLLESF+KSFP L+FPPLPERGDFDL
Sbjct: 913  GVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDL 972

Query: 741  REVLESPYFFN 709
             +VL SPYFFN
Sbjct: 973  TDVLGSPYFFN 983