BLASTX nr result
ID: Achyranthes22_contig00024242
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00024242
(412 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containi... 204 1e-50
gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus pe... 189 3e-46
gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis] 182 5e-44
ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containi... 181 9e-44
ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containi... 180 2e-43
ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containi... 179 3e-43
ref|XP_002530052.1| pentatricopeptide repeat-containing protein,... 179 3e-43
ref|XP_002312667.1| pentatricopeptide repeat-containing family p... 176 2e-42
ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containi... 176 4e-42
gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isof... 174 8e-42
ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containi... 174 1e-41
gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus... 171 7e-41
ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containi... 167 1e-39
ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutr... 165 7e-39
ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containi... 161 7e-38
ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citr... 161 7e-38
ref|XP_002889980.1| pentatricopeptide repeat-containing protein ... 160 2e-37
ref|NP_172763.1| pentatricopeptide repeat-containing protein [Ar... 158 6e-37
ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Caps... 158 8e-37
ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [A... 145 7e-33
>ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product
[Vitis vinifera]
Length = 519
Score = 204 bits (518), Expect = 1e-50
Identities = 97/138 (70%), Positives = 118/138 (85%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+N+ LKGLCKANRLDKAY+++ + ME KGLCDVVSYNTI++ LC+ H KRA
Sbjct: 284 GVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM KGI+PD T+TILI +FL+EG+SN+AKKLLDQMTGLG+LPD V YTTI+DH
Sbjct: 344 YKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDH 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L KTGK+ +A VF DMV
Sbjct: 404 LCKTGKMGMAHSVFCDMV 421
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK ++ A+ + M G+ DVVSYN ++ GLC + A
Sbjct: 389 GLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEA 448
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L+E+M G PD T+ ++I + E +VA ++ DQM G D T+++
Sbjct: 449 MHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVN 507
Score = 65.1 bits (157), Expect = 9e-09
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G + +++++F+ GLCK LL+ M+ G D+ +YN L LC + + A
Sbjct: 74 GFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVA 133
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ + M +KG PD TYTI+IN + G + A ++ M G PD ++
Sbjct: 134 LGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLG 193
Query: 358 LSKTGKVDVAF 390
L GKVD+A+
Sbjct: 194 LCHDGKVDLAY 204
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI+++N +L LC N+LD A ++ M KG D+V+Y ++ GLC A
Sbjct: 109 GYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+++ M +KG SPD + L+ +G ++A +L I Y ++I+
Sbjct: 169 VEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLING 228
Query: 358 LSKTGKVDVAFGVFSDM 408
+ G +D A + S M
Sbjct: 229 FCQAGWIDKAQSIISFM 245
Score = 64.3 bits (155), Expect = 2e-08
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +F +K + + A LLD M GL D V Y TI+ LC + A
Sbjct: 354 GITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMA 413
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M + GI+PD +Y LIN + + A L + M G PD V + II
Sbjct: 414 HSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGG 473
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+ VA V+ M+
Sbjct: 474 LIWEKKLSVACRVWDQMM 491
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N+F+ L + +R D A D M +G + +Y+ + GLC + KL E+M
Sbjct: 47 YNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMD 106
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVD 381
+ G PD Y I +N E +VA ++ M G PD V YT +I+ L + G+ D
Sbjct: 107 RLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFD 166
Query: 382 VAFGVFSDMV 411
A ++ +MV
Sbjct: 167 SAVEIWRNMV 176
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G PD + + GLC ++D AY L + M + YN+++ G C I +A
Sbjct: 179 GFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKA 238
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G PD TY +L+N E A+ L+ +M G+ PD Y ++
Sbjct: 239 QSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKG 298
Query: 358 LSKTGKVDVAF 390
L K ++D A+
Sbjct: 299 LCKANRLDKAY 309
>gb|EMJ28460.1| hypothetical protein PRUPE_ppa017811mg [Prunus persica]
Length = 541
Score = 189 bits (481), Expect = 3e-46
Identities = 90/138 (65%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDV-MEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+NQ LKGLC+ANR DKAYLL+ ME KGLC+VVSYNTI+ C H RA
Sbjct: 284 GMEPDVYSYNQLLKGLCQANRADKAYLLMRTRMEPKGLCNVVSYNTIITAFCRAHRTGRA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM QKG PD T+TILI +FL+EG+S++A KLLDQMT +G+LPD +FYTTI+DH
Sbjct: 344 YKLFEEMGQKGTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDH 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+GK+ +A+ VFSDM+
Sbjct: 404 LCKSGKIAMAYSVFSDML 421
Score = 78.6 bits (192), Expect = 8e-13
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G PD+ +F ++ + D A LLD M V GL D + Y TI+ LC I A
Sbjct: 354 GTMPDVVTFTILIEAFLREGSSDIANKLLDQMTVMGLLPDRIFYTTIVDHLCKSGKIAMA 413
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M +KGI+PD ++ LIN + + A L ++M G PD V + II
Sbjct: 414 YSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEAMHLYEEMQNRGCCPDEVTFKLIIGG 473
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ VA V+ M+
Sbjct: 474 LIRENKLSVACRVWDQMM 491
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK+ ++ AY + M KG+ D VS+N ++ GLC + A
Sbjct: 389 GLLPDRIFYTTIVDHLCKSGKIAMAYSVFSDMLEKGIAPDAVSFNALINGLCKASRVSEA 448
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPD 327
L+EEM +G PD T+ ++I ++E +VA ++ DQM G D
Sbjct: 449 MHLYEEMQNRGCCPDEVTFKLIIGGLIRENKLSVACRVWDQMMEKGFTLD 498
Score = 65.9 bits (159), Expect = 5e-09
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 2/138 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ NR A + M KG DVVSY ++ GLC +A
Sbjct: 109 GAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKL-LDQMTGLGILPDCVFYTTIID 354
++ M +KG PD T L+ G ++A L + +M G + + Y T+I+
Sbjct: 169 VDIWTSMIRKGFKPDNIACTALVVGLCDGGKVDLAYNLVIGEMKG-QVKFSNLMYNTLIN 227
Query: 355 HLSKTGKVDVAFGVFSDM 408
+ G++D A + S M
Sbjct: 228 GFCRAGRIDKAQAIKSFM 245
Score = 62.8 bits (151), Expect = 5e-08
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G +++++F+ GLCK L+ M+ G D+ ++N L LC + A
Sbjct: 74 GFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMDRLGAVPDIWAFNIYLNLLCQENRAHFA 133
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
++F M KG PD +YTILI+ + + A + M G PD + T ++
Sbjct: 134 LEVFHRMVDKGREPDVVSYTILIDGLCKARQFDKAVDIWTSMIRKGFKPDNIACTALVVG 193
Query: 358 LSKTGKVDVAFGV 396
L GKVD+A+ +
Sbjct: 194 LCDGGKVDLAYNL 206
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDV--VSYNTILRGLCSGHHIKR 174
G +PD + + GLC ++D AY L+ + E+KG + YNT++ G C I +
Sbjct: 179 GFKPDNIACTALVVGLCDGGKVDLAYNLV-IGEMKGQVKFSNLMYNTLINGFCRAGRIDK 237
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A + M + G D T+ +L+ E A+KL+ +M G+ PD Y ++
Sbjct: 238 AQAIKSFMKRNGCESDLVTHNVLLKYCCNEFMLEEAEKLMKKMERSGMEPDVYSYNQLLK 297
Query: 355 HLSKTGKVDVAF 390
L + + D A+
Sbjct: 298 GLCQANRADKAY 309
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N+F+ L + +R D A M +G +Y+ + GLC + KL +M
Sbjct: 47 YNRFIGVLVRHSRYDLAEHYYYEMVPQGFSLSAFTYSRFISGLCKIRNFTLIEKLIRDMD 106
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVD 381
+ G PD + I +N QE ++ A ++ +M G PD V YT +ID L K + D
Sbjct: 107 RLGAVPDIWAFNIYLNLLCQENRAHFALEVFHRMVDKGREPDVVSYTILIDGLCKARQFD 166
Query: 382 VAFGVFSDMV 411
A +++ M+
Sbjct: 167 KAVDIWTSMI 176
>gb|EXB82495.1| hypothetical protein L484_027670 [Morus notabilis]
Length = 513
Score = 182 bits (461), Expect = 5e-44
Identities = 88/138 (63%), Positives = 111/138 (80%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++PD YS+N+ LKGLC+A+R DKAYLL+ D ME KGL +VVSYNTI+ C ++RA
Sbjct: 284 GMKPDSYSYNKLLKGLCRAHRPDKAYLLMVDSMESKGLANVVSYNTIIGAFCKLLRVRRA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+LFEEM QKGI PD T+TILI +FL G+S+VAK+LLDQMTG+G+LPDC+FYT I+DH
Sbjct: 344 YQLFEEMRQKGIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDH 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K GK+ +A VFSDMV
Sbjct: 404 LCKAGKIGMAHSVFSDMV 421
Score = 75.1 bits (183), Expect = 9e-12
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+EPD+ +F +K D A LLD M GL D + Y I+ LC I A
Sbjct: 354 GIEPDVVTFTILIKAFLSVGSSDVAKRLLDQMTGMGLLPDCLFYTIIVDHLCKAGKIGMA 413
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M ++GI+PD +Y +IN + + A L ++M G+ PD V + II
Sbjct: 414 HSVFSDMVERGITPDVISYNAIINGLCKAFRVSEAVHLYEEMQARGLCPDEVTFKLIIGG 473
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K K+ +A V+ M+
Sbjct: 474 LIKENKLPLACRVWDQMM 491
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCKA ++ A+ + M +G+ DV+SYN I+ GLC + A
Sbjct: 389 GLLPDCLFYTIIVDHLCKAGKIGMAHSVFSDMVERGITPDVISYNAIINGLCKAFRVSEA 448
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
L+EEM +G+ PD T+ ++I ++E +A ++ DQM G + T+I+
Sbjct: 449 VHLYEEMQARGLCPDEVTFKLIIGGLIKENKLPLACRVWDQMMEKGFTLEPALSETLINA 508
Query: 358 LS 363
++
Sbjct: 509 IN 510
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/125 (29%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ LC LL+ M+ G + D+ ++N L LC H ++ A ++F
Sbjct: 80 FTYSRFISALCAVKNFLLVEKLLEDMDKLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRR 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M ++G PD TYTILI+ + + A + M G +PD + T ++ L + GK
Sbjct: 140 MVERGREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGK 199
Query: 376 VDVAF 390
VD+A+
Sbjct: 200 VDLAY 204
Score = 55.8 bits (133), Expect = 6e-06
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC +R+ A + M +G DVV+Y ++ GLC A
Sbjct: 109 GCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWKFDAA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ + M +KG PDT T L+ + G ++A +L + + + Y ++I
Sbjct: 169 VEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLAYELTVGALKGRVKFNNLIYNSLISG 228
Query: 358 LSKTGKVDVA 387
+ G++D A
Sbjct: 229 FCRAGRIDKA 238
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGLCDV-VSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N+F+ L + +RLD A M +G +Y+ + LC+ + KL E+M
Sbjct: 47 YNRFIGVLARHSRLDLAEHYYHKMAPQGFSLYPFTYSRFISALCAVKNFLLVEKLLEDMD 106
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVD 381
+ G PD + I +N E +A ++ +M G PD V YT +ID L K K D
Sbjct: 107 KLGCIPDIWAFNIYLNVLCGEHRVQLALEVFRRMVERGREPDVVTYTILIDGLCKAWKFD 166
Query: 382 VAFGVFSDMV 411
A + M+
Sbjct: 167 AAVEAWCGMI 176
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G EPD+ ++ + GLCKA + D A M KG D ++ ++ GLC G + A
Sbjct: 144 GREPDVVTYTILIDGLCKAWKFDAAVEAWCGMIKKGFVPDTIACTALVVGLCEGGKVDLA 203
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
Y+L + + + Y LI+ F + G + A+ + D M G PD V Y ++
Sbjct: 204 YELTVGALKGRVKFNNLIYNSLISGFCRAGRIDKAQVIKDFMKRDGCEPDLVTYNVLL 261
>ref|XP_004504137.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cicer arietinum]
Length = 516
Score = 181 bits (459), Expect = 9e-44
Identities = 84/138 (60%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYL-LLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+N+ LKG CKAN++D+AYL ++ M+ KG+CDVVSYNTI+ C I+R
Sbjct: 285 GVEPDLYSYNELLKGFCKANQVDRAYLTMVKRMQTKGMCDVVSYNTIIAAFCKARRIERG 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+LFEEM +KGI PD T+T+LI +F +EG S+VAKKLLDQMT +GI+PD +FYTTI+D
Sbjct: 345 YELFEEMRRKGIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDR 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K KVD+A GVF DMV
Sbjct: 405 LCKAWKVDIAHGVFCDMV 422
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ N+L+ A L M +KG DVVSYN I+ LC +
Sbjct: 110 GFVPDIWAFNIYLNLLCRENQLETALQLFRTMPLKGREPDVVSYNIIVNALCKAKRVDEV 169
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+++ + +KG+ PD + L+ GN ++A +L+ + G+ +C+ Y +I
Sbjct: 170 ARVWRSLIEKGLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISG 229
Query: 358 LSKTGKVDVAFGV 396
+ G++D A +
Sbjct: 230 FCRMGRIDKALAI 242
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G++PD+ +F ++ K D A LLD M G+ D++ Y TI+ LC + A
Sbjct: 355 GIQPDVITFTVLIEAFFKEGGSDVAKKLLDQMTTMGIVPDLIFYTTIVDRLCKAWKVDIA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M + G+SPD +Y LIN F + A L D+M G+ PD V + I+
Sbjct: 415 HGVFCDMVENGVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A V+ M+
Sbjct: 475 LIRENKISEACKVWDQMM 492
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+ PD+ + + LCKA ++D A+ + D++E DVVSYN ++ G C + A
Sbjct: 390 GIVPDLIFYTTIVDRLCKAWKVDIAHGVFCDMVENGVSPDVVSYNALINGFCKASRVMDA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L++EM KG+ PD T+ +++ ++E + A K+ DQM G D T+++
Sbjct: 450 MCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEACKVWDQMMEKGFTLDRRLSETLVN 508
Score = 63.5 bits (153), Expect = 3e-08
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL+PD + GLC A +D AY L++ V+ + + YN ++ G C I +A
Sbjct: 180 GLKPDFKVCAALVVGLCSAGNVDLAYELIVGVINGGVKVNCLVYNALISGFCRMGRIDKA 239
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G PD TY IL+N E + KL++ M G+ PD Y ++
Sbjct: 240 LAIKGFMSRNGCVPDLVTYNILLNYCCDEVMLDEVVKLVESMERSGVEPDLYSYNELLKG 299
Query: 358 LSKTGKVDVAF 390
K +VD A+
Sbjct: 300 FCKANQVDRAY 310
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ S+N + G CKA+R+ A L D M+ KGL D V++ I+ GL + I A
Sbjct: 425 GVSPDVVSYNALINGFCKASRVMDAMCLYDEMQDKGLYPDGVTFKLIVGGLIRENKISEA 484
Query: 178 YKLFEEMFQKGISPDTRTYTILINS 252
K++++M +KG + D R L+N+
Sbjct: 485 CKVWDQMMEKGFTLDRRLSETLVNA 509
Score = 55.8 bits (133), Expect = 6e-06
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKA-YLLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ LC YLL D+ + + D+ ++N L LC + ++ A +LF
Sbjct: 81 FTYSRFIAALCSVKNFSLIDYLLRDMDALGFVPDIWAFNIYLNLLCRENQLETALQLFRT 140
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M KG PD +Y I++N+ + + ++ + G+ PD ++ L G
Sbjct: 141 MPLKGREPDVVSYNIIVNALCKAKRVDEVARVWRSLIEKGLKPDFKVCAALVVGLCSAGN 200
Query: 376 VDVAF 390
VD+A+
Sbjct: 201 VDLAY 205
>ref|XP_004310156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 516
Score = 180 bits (457), Expect = 2e-43
Identities = 87/138 (63%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++ D YS+N FLKGLCK NR +KAYL + ++ME KGLC+VVS+NTI+ C G +RA
Sbjct: 285 GMKLDAYSYNGFLKGLCKDNRPEKAYLFMKNMMEPKGLCNVVSFNTIIMACCKGGQTRRA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLF+EMFQKGI PD T+TILI +FL+EG+S+VAKKLLDQMTG+ +LPD +FYTTIIDH
Sbjct: 345 YKLFQEMFQKGILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+GK+ +A +F+DM+
Sbjct: 405 LCKSGKIAMACDMFNDML 422
Score = 69.7 bits (169), Expect = 4e-10
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +F + + D A LLD M L D + Y TI+ LC I A
Sbjct: 355 GILPDVVTFTILIGAFLREGSSDVAKKLLDQMTGMDLLPDRIFYTTIIDHLCKSGKIAMA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+F +M +KGI+ D Y LI+ + A L ++M G PD V Y +I
Sbjct: 415 CDMFNDMLEKGITADVVLYNALISGLCRASRVTEAMHLYEEMQTRGCFPDEVTYKVVIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K ++ VA GV+ +M+
Sbjct: 475 LIKDKRLSVACGVWDEMM 492
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLC N LL M+ G + D+ ++N L LC + I A ++F+
Sbjct: 81 FTYSRFISGLCNVNNFTLIEKLLRDMDRLGSVPDIWAFNIYLNLLCQENRIHYALEVFDR 140
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M KG PD +YTI+I+ + G + A ++ + M G PD + T ++ L GK
Sbjct: 141 MADKGREPDVVSYTIVIHGLCKAGRFDNAVEIWNGMISKGFRPDTIACTALVVGLCGGGK 200
Query: 376 VDVAF 390
VD+A+
Sbjct: 201 VDLAY 205
Score = 66.6 bits (161), Expect = 3e-09
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ NR+ A + D M KG DVVSY ++ GLC A
Sbjct: 110 GSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFDNA 169
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKL-LDQMTGLGILPDCVFYTTIID 354
+++ M KG PDT T L+ G ++A L + +M G G+ + + Y +I
Sbjct: 170 VEIWNGMISKGFRPDTIACTALVVGLCGGGKVDLAYDLVIGEMKG-GVEFNNLIYNALIS 228
Query: 355 HLSKTGKVDVA 387
+ ++D A
Sbjct: 229 GFCRARRIDKA 239
Score = 65.5 bits (158), Expect = 7e-09
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +1
Query: 4 LEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRAY 180
L PD + + LCK+ ++ A + + M KG+ DVV YN ++ GLC + A
Sbjct: 391 LLPDRIFYTTIIDHLCKSGKIAMACDMFNDMLEKGITADVVLYNALISGLCRASRVTEAM 450
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L+EEM +G PD TY ++I +++ +VA + D+M G D V T+I+
Sbjct: 451 HLYEEMQTRGCFPDEVTYKVVIGGLIKDKRLSVACGVWDEMMEKGFTLDRVLSETLIN 508
Score = 62.0 bits (149), Expect = 8e-08
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N+F+ L K +R D A M +G +Y+ + GLC+ ++ KL +M
Sbjct: 48 YNRFIGVLVKHSRYDLAEHYYYEMAPQGFSLTPFTYSRFISGLCNVNNFTLIEKLLRDMD 107
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVD 381
+ G PD + I +N QE + A ++ D+M G PD V YT +I L K G+ D
Sbjct: 108 RLGSVPDIWAFNIYLNLLCQENRIHYALEVFDRMADKGREPDVVSYTIVIHGLCKAGRFD 167
Query: 382 VAFGVFSDMV 411
A +++ M+
Sbjct: 168 NAVEIWNGMI 177
Score = 60.5 bits (145), Expect = 2e-07
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDV--VSYNTILRGLCSGHHIKR 174
G PD + + GLC ++D AY L+ + E+KG + + YN ++ G C I +
Sbjct: 180 GFRPDTIACTALVVGLCGGGKVDLAYDLV-IGEMKGGVEFNNLIYNALISGFCRARRIDK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A + M + G PD T+ +L+N E A+KL+ QM +G+ D Y +
Sbjct: 239 AQAIKLFMKRNGCKPDLVTHNVLLNYCCNEFMLEEAEKLMRQMEKIGMKLDAYSYNGFLK 298
Query: 355 HLSKTGKVDVAFGVFSDMV 411
L K + + A+ +M+
Sbjct: 299 GLCKDNRPEKAYLFMKNMM 317
>ref|XP_006364563.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Solanum tuberosum]
Length = 511
Score = 179 bits (455), Expect = 3e-43
Identities = 91/138 (65%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GLEPD YS+NQ L+G CKANRLDKAY L++D ME KGL DVVSYNTI+R LC H K+A
Sbjct: 284 GLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDHSKKA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y LFEEM QK I PD T+TILI + L+EGNS+VAK L+DQMT +G+ PD V YT+IID+
Sbjct: 344 YNLFEEMEQKKIVPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDN 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L KTGK+ VA +F DMV
Sbjct: 404 LCKTGKLGVAESIFRDMV 421
Score = 72.0 bits (175), Expect = 8e-11
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N + G C+A R+DKA + M G D+V+YN L C+ ++ A KL E+M
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNYCCNELMLEEAVKLIEKME 281
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLL-DQMTGLGILPDCVFYTTIIDHLSKTGKV 378
G+ PD +Y L+ F + + A KL+ D+M G++ D V Y TII L KT
Sbjct: 282 GNGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLV-DVVSYNTIIRALCKTDHS 340
Query: 379 DVAFGVFSDM 408
A+ +F +M
Sbjct: 341 KKAYNLFEEM 350
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK +L A + M +G+ DV+SYN ++ G C + A
Sbjct: 389 GLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEA 448
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
L+E+M + ++PD T+ ++I +QE N +VA + DQM G D T+I+
Sbjct: 449 LSLYEDMQARDLNPDEITFKLIIGGLIQEKNLSVACAIWDQMMEKGFTLDRDLSQTLINA 508
Query: 358 LS 363
++
Sbjct: 509 IN 510
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G+ P+ +++N +L LC N +D A L+ VM KG DVVSY ++ GLC A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCV-----FYT 342
+++ M +KG+ PD + L+ G ++A +L LGIL V Y
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLAYELT-----LGILRGQVKFNTEIYN 223
Query: 343 TIIDHLSKTGKVDVA 387
T+I+ + G++D A
Sbjct: 224 TLINGFCRAGRIDKA 238
Score = 61.2 bits (147), Expect = 1e-07
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G + ++++F+ GLCK D LL+ M+ G+ + +YN L LCS + + A
Sbjct: 74 GFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIA 133
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+L M +KG PD +YTI+I+ + G + A ++ M G+ PD ++
Sbjct: 134 LELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFG 193
Query: 358 LSKTGKVDVAF 390
L +G+VD+A+
Sbjct: 194 LCGSGRVDLAY 204
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Frame = +1
Query: 10 PDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKL 186
PD+ +F ++ K A L+D M GL D V Y +I+ LC + A +
Sbjct: 357 PDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESI 416
Query: 187 FEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSK 366
F +M ++G++PD +Y LI+ F + A L + M + PD + + II L +
Sbjct: 417 FRDMVEQGVAPDVISYNALISGFCKASRVTEALSLYEDMQARDLNPDEITFKLIIGGLIQ 476
Query: 367 TGKVDVAFGVFSDMV 411
+ VA ++ M+
Sbjct: 477 EKNLSVACAIWDQMM 491
Score = 58.9 bits (141), Expect = 7e-07
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G EPD+ S+ + GLC+ R D A + M KGL D + ++ GLC + A
Sbjct: 144 GREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFGLCGSGRVDLA 203
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+L + + + +T Y LIN F + G + A+ + M G PD V Y +++
Sbjct: 204 YELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKAQAIKTFMRRNGCEPDLVTYNVFLNY 263
>ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530468|gb|EEF32352.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 554
Score = 179 bits (455), Expect = 3e-43
Identities = 87/138 (63%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+NQ LKG+CK N DKAYLL+ + M KGLCDVVSYNTI++ C A
Sbjct: 285 GIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM QKGI PD T+TI I +FL +G+ N+AKKLLDQMT +G+ PDC+FYTTIIDH
Sbjct: 345 YKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+GKV++A +F DMV
Sbjct: 405 LCKSGKVEMAHSIFCDMV 422
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +F F+K + A LLD M GL D + Y TI+ LC ++ A
Sbjct: 355 GIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M ++GISPD ++ LIN F + + A L ++M G PD V Y II
Sbjct: 415 HSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ +A V+ M+
Sbjct: 475 LIEEKKISIACMVWGQMM 492
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK+ +++ A+ + M +G+ DV+S+N ++ G C + A
Sbjct: 390 GLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
L+EEM +G PD TY ++I ++E ++A + QM G D T+I
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 66.6 bits (161), Expect = 3e-09
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKR 174
G PD + + GLC ++D AY L++DVM+ + + YN ++ G C I +
Sbjct: 179 GFSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A + M + G PD TY + +N F E + AKKLL M GI PD Y ++
Sbjct: 239 AQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLK 298
Query: 355 HLSKTGKVDVAF 390
+ K D A+
Sbjct: 299 GICKGNCPDKAY 310
>ref|XP_002312667.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222852487|gb|EEE90034.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 512
Score = 176 bits (447), Expect = 2e-42
Identities = 86/137 (62%), Positives = 109/137 (79%), Gaps = 1/137 (0%)
Frame = +1
Query: 4 LEPDIYSFNQFLKGLCKANRLDKAYL-LLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
+EPD+YS+NQ LK CKAN DKAYL ++ M KG CDVVSYNTI++ CS + +RAY
Sbjct: 286 IEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGFCDVVSYNTIIKAFCSISNNRRAY 345
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHL 360
KLFEEM +KGI+PD T+TILI +FL+EGNS++AKKLLD M G+G+LPD +FYTTIIDH
Sbjct: 346 KLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHH 405
Query: 361 SKTGKVDVAFGVFSDMV 411
K+GKV++A +F DMV
Sbjct: 406 CKSGKVEMAHSIFCDMV 422
Score = 75.9 bits (185), Expect = 5e-12
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +F +K + D A LLD+M GL D + Y TI+ C ++ A
Sbjct: 355 GIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M +KGI+PD +Y LIN F + L +QM G PD V Y II
Sbjct: 415 HSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSFPDEVTYKLIIGA 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A V+ M+
Sbjct: 475 LVRENKLSDACRVWDQMM 492
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + CK+ +++ A+ + M KG+ DVVSYN ++ G C +
Sbjct: 390 GLLPDRIFYTTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEV 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPD 327
L+E+M Q+G PD TY ++I + ++E + A ++ DQM G+ D
Sbjct: 450 MHLYEQMLQRGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLD 499
Score = 59.7 bits (143), Expect = 4e-07
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDVVS--YNTILRGLCSGHHIKR 174
G+ PD + GLC ++D AY L+ + GL +V + YN ++ G C I +
Sbjct: 179 GIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A + M + G PD TY +L+N E A KLL +M I PD Y ++
Sbjct: 239 ALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLK 298
Query: 355 HLSKTGKVDVAF 390
K D A+
Sbjct: 299 AHCKANHPDKAY 310
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Frame = +1
Query: 10 PDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRAYKL 186
PDI++FN +L L + NR + A + M +G DVV++ I+ GLC A +
Sbjct: 112 PDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQF 171
Query: 187 FEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILP-DCVFYTTIIDHLS 363
+ M KGI PD + L G ++A +L+ + G+ + Y +I
Sbjct: 172 WLNMLDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFC 231
Query: 364 KTGKVDVAFGVFSDM 408
+ G++D A + S M
Sbjct: 232 RAGRIDKALAMVSFM 246
>ref|XP_003531325.2| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Glycine max]
gi|571471241|ref|XP_006585252.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Glycine max]
Length = 521
Score = 176 bits (445), Expect = 4e-42
Identities = 78/138 (56%), Positives = 108/138 (78%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+N+ LKG CKAN +D+A+L++ + M+ KG+CDVVSYNT++ C ++
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKG 348
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+LFEEM KGI PD T+ ILI++FL+EG+++V KKLLD+MT + +LPDC+FYT ++DH
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K GKVDVA VF DMV
Sbjct: 409 LCKNGKVDVAHSVFRDMV 426
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ NRL+ A L M KG DVVSY I+ LC+ A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
K++ + KG+SPD + L+ G ++A +L+ + G+ + + Y +ID
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDG 233
Query: 358 LSKTGKVDVAFGV 396
+ G+VD A +
Sbjct: 234 FCRMGRVDKAMKI 246
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVM-EVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +FN + + LLD M +++ L D + Y ++ LC + A
Sbjct: 359 GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVA 418
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F +M + G++PD +Y L+N F + A L D+M G+ PD V Y I+
Sbjct: 419 HSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGG 478
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ +A V+ M+
Sbjct: 479 LIRGKKISLACRVWDQMM 496
Score = 68.6 bits (166), Expect = 8e-10
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDVVS--YNTILRGLCSGHHIKR 174
GL PD + + GLC R+D AY L+ V +KG V S YN ++ G C + +
Sbjct: 184 GLSPDYKACVALVVGLCSGGRVDLAYELV-VGVIKGGVKVNSLVYNALIDGFCRMGRVDK 242
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A K+ M + G PD TY IL+N +EG + A +L++ M G+ PD Y ++
Sbjct: 243 AMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLK 302
Query: 355 HLSKTGKVDVA 387
K VD A
Sbjct: 303 GFCKANMVDRA 313
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +1
Query: 10 PDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKL 186
PD + + LCK ++D A+ + M G+ DV+SYN +L G C + A L
Sbjct: 397 PDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHL 456
Query: 187 FEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSK 366
F+EM KG+ PD TY +++ ++ ++A ++ DQM G T+ HLS+
Sbjct: 457 FDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGF--------TLNRHLSE 508
Query: 367 T 369
T
Sbjct: 509 T 509
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +1
Query: 19 YSFNQFLKGLCKA-NRLDKAY---LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAYKL 186
+++++F+ LC A N ++ LLLD+ + + D+ ++NT L LC + ++ A +L
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 187 FEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSK 366
F M KG PD +YTI+I++ + A K+ ++ G+ PD ++ L
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 367 TGKVDVAF 390
G+VD+A+
Sbjct: 202 GGRVDLAY 209
>gb|EOY00680.1| Pentatricopeptide repeat superfamily protein isoform 1 [Theobroma
cacao] gi|508708784|gb|EOY00681.1| Pentatricopeptide
repeat superfamily protein isoform 1 [Theobroma cacao]
gi|508708785|gb|EOY00682.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
gi|508708786|gb|EOY00683.1| Pentatricopeptide repeat
superfamily protein isoform 1 [Theobroma cacao]
Length = 516
Score = 174 bits (442), Expect = 8e-42
Identities = 81/138 (58%), Positives = 106/138 (76%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+ PD+Y +NQ +KG C ANR DKA LL+ + ME GL D VS+NTI++ C G HI +A
Sbjct: 285 GIGPDVYGYNQMIKGFCNANRPDKALLLMVNKMEANGLADAVSHNTIIKAFCKGGHIGKA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM +KGI+PD T+T LI + L EG+S++AK LLD+M+G+G+LPDC+FYT IIDH
Sbjct: 345 YKLFEEMGRKGIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K GKV++A VF DM+
Sbjct: 405 LCKNGKVEMAHSVFDDMI 422
Score = 75.5 bits (184), Expect = 7e-12
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +F +K D A LLD M GL D + Y I+ LC ++ A
Sbjct: 355 GIAPDVVTFTTLIKACLTEGSSDIAKALLDRMSGMGLLPDCIFYTAIIDHLCKNGKVEMA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ +F++M ++G++PD +Y LIN F + ++ A L ++M G PD V + II
Sbjct: 415 HSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A V+ M+
Sbjct: 475 LIREKKLSKACKVWDQMM 492
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/119 (33%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK +++ A+ + D M +G+ DVVSYN ++ G C + A
Sbjct: 390 GLLPDCIFYTAIIDHLCKNGKVEMAHSVFDDMIKQGVNPDVVSYNALINGFCKSNRASEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L+EEM +G SPD T+ ++I ++E + A K+ DQM G D T+I+
Sbjct: 450 IHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKACKVWDQMMEKGFTLDGAVSETLIN 508
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVME-VKGLCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ LC + LLL+ M+ + + D+ ++N L LC I+ A ++F
Sbjct: 80 FTYSRFISALCPVKNFNFIELLLNDMDKLNYVPDIWAFNIYLNLLCREKKIELALEVFHS 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
+ +KG PD TYTI+I+ + G + A +M G G PD ++ L GK
Sbjct: 140 LVKKGRDPDVVTYTIMIDGLCKAGKFDNAVGFWREMVGKGFRPDNKACCALVVGLCDGGK 199
Query: 376 VDVAFGVFSDMV 411
VD+A+ + +++
Sbjct: 200 VDLAYELVVEVI 211
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ S+N + G CK+NR +A L + M+ +G D V++ I+ GL + +A
Sbjct: 425 GVNPDVVSYNALINGFCKSNRASEAIHLYEEMQTRGFSPDEVTFKLIIGGLIREKKLSKA 484
Query: 178 YKLFEEMFQKGISPDTRTYTILINS 252
K++++M +KG + D LIN+
Sbjct: 485 CKVWDQMMEKGFTLDGAVSETLINA 509
>ref|XP_004240634.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Solanum lycopersicum]
Length = 511
Score = 174 bits (440), Expect = 1e-41
Identities = 89/138 (64%), Positives = 107/138 (77%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GLEPD YS+NQ L+G CKANRLDKAY L++D ME KGL DVVSYNTI+R LC K+A
Sbjct: 284 GLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLVDVVSYNTIIRALCKTDQSKKA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y LF+EM QK I PD T+TILI + L+EGNS+VAK L+DQMT +G+ PD V YT+IID+
Sbjct: 344 YILFKEMEQKKILPDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDN 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L KTGK+ VA +F DMV
Sbjct: 404 LCKTGKLGVAESIFRDMV 421
Score = 70.5 bits (171), Expect = 2e-10
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL PD + + GLC + ++D AY L L ++ + + YNT++ G C I +A
Sbjct: 179 GLRPDNKACKALVFGLCGSGKVDLAYELTLGILRGQVKFNTEIYNTLINGFCRAGRIDKA 238
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G PD TY + +N E A KL+++M G+G+ PD Y ++
Sbjct: 239 QAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKMEGIGLEPDGYSYNQLLRG 298
Query: 358 LSKTGKVDVAFGVFSD 405
K ++D A+ + D
Sbjct: 299 FCKANRLDKAYKLMVD 314
Score = 70.5 bits (171), Expect = 2e-10
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 2/130 (1%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N + G C+A R+DKA + M+ G D+V+YN L C+ ++ A KL E+M
Sbjct: 222 YNTLINGFCRAGRIDKAQAIKTFMKRNGCEPDLVTYNVFLNYCCNELMLEEAMKLIEKME 281
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLL-DQMTGLGILPDCVFYTTIIDHLSKTGKV 378
G+ PD +Y L+ F + + A KL+ D+M G++ D V Y TII L KT +
Sbjct: 282 GIGLEPDGYSYNQLLRGFCKANRLDKAYKLMVDKMETKGLV-DVVSYNTIIRALCKTDQS 340
Query: 379 DVAFGVFSDM 408
A+ +F +M
Sbjct: 341 KKAYILFKEM 350
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + + LCK +L A + M +G+ DV+SYN ++ G C + A
Sbjct: 389 GLFPDRVLYTSIIDNLCKTGKLGVAESIFRDMVEQGVAPDVISYNALISGFCKASRVTEA 448
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
L+E+M +G++PD T+ ++I +Q N +VA + DQM G D T+I+
Sbjct: 449 LSLYEDMQTRGLNPDEITFKLIIGGLIQGKNLSVACAIWDQMMEKGFTLDRDLSQTLINA 508
Query: 358 LS 363
++
Sbjct: 509 IN 510
Score = 66.2 bits (160), Expect = 4e-09
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G+ P+ +++N +L LC N +D A L+ VM KG DVVSY ++ GLC A
Sbjct: 109 GIVPNFWAYNMYLNLLCSENLVDIALELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCV-----FYT 342
+++ M +KG+ PD + L+ G ++A +L LGIL V Y
Sbjct: 169 VEMWHTMIRKGLRPDNKACKALVFGLCGSGKVDLAYELT-----LGILRGQVKFNTEIYN 223
Query: 343 TIIDHLSKTGKVDVA 387
T+I+ + G++D A
Sbjct: 224 TLINGFCRAGRIDKA 238
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G + ++++F+ GLCK D LL+ M+ G+ + +YN L LCS + + A
Sbjct: 74 GFSLNSLTYSKFICGLCKVKNFDLISRLLNDMDRVGIVPNFWAYNMYLNLLCSENLVDIA 133
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+L M +KG PD +YTI+I+ + G + A ++ M G+ PD ++
Sbjct: 134 LELIRVMGEKGREPDVVSYTIVISGLCRIGRFDNAVEMWHTMIRKGLRPDNKACKALVFG 193
Query: 358 LSKTGKVDVAF 390
L +GKVD+A+
Sbjct: 194 LCGSGKVDLAY 204
Score = 61.6 bits (148), Expect = 1e-07
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Frame = +1
Query: 10 PDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKL 186
PD+ +F ++ K A L+D M GL D V Y +I+ LC + A +
Sbjct: 357 PDVVTFTILIEASLKEGNSSVAKALVDQMTSMGLFPDRVLYTSIIDNLCKTGKLGVAESI 416
Query: 187 FEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSK 366
F +M ++G++PD +Y LI+ F + A L + M G+ PD + + II L +
Sbjct: 417 FRDMVEQGVAPDVISYNALISGFCKASRVTEALSLYEDMQTRGLNPDEITFKLIIGGLIQ 476
Query: 367 TGKVDVAFGVFSDMV 411
+ VA ++ M+
Sbjct: 477 GKNLSVACAIWDQMM 491
>gb|ESW31683.1| hypothetical protein PHAVU_002G258900g [Phaseolus vulgaris]
Length = 518
Score = 171 bits (434), Expect = 7e-41
Identities = 82/138 (59%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD YS+N+ LK CKAN +D+AYL+L + M+ KG+CDVVSYNT++ C +R
Sbjct: 287 GVEPDFYSYNELLKCFCKANMVDRAYLMLVERMQTKGMCDVVSYNTLITAFCKVRRTRRG 346
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+LFEEM KGI PD T+ ILI++FL+EG+ V KKLLD+MT LGILPD +FYT ++DH
Sbjct: 347 YELFEEMCGKGIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDH 406
Query: 358 LSKTGKVDVAFGVFSDMV 411
L KTGKVD A VF DMV
Sbjct: 407 LCKTGKVDTADSVFRDMV 424
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ NRL+ A L M +G DVVSY I+ LC A
Sbjct: 112 GFVPDIWAFNTYLSFLCRHNRLETALELFHSMPSEGREPDVVSYTIIVDALCKAQRYDEA 171
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+++ + KG+SPD + L+ G ++A +L+ + G+ + + Y +ID
Sbjct: 172 ARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDG 231
Query: 358 LSKTGKVDVAFGV 396
+ G+VD A +
Sbjct: 232 FCRMGRVDKAMKI 244
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G EPD+ S+ + LCKA R D+A + + KGL D + ++ GLC G + A
Sbjct: 147 GREPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGGRVDLA 206
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+L + + G+ + Y LI+ F + G + A K+ M+ G +PD V Y T++++
Sbjct: 207 YELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKAMKIKAFMSRNGCVPDLVTYNTLLNY 266
Query: 358 LSKTGKVDVAFGVFSDM 408
G +D A + M
Sbjct: 267 CCDEGMLDEALRLVETM 283
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +FN + + + LLD M G+ D + Y ++ LC + A
Sbjct: 357 GIRPDMVTFNILIDAFLREGSIQVVKKLLDEMTRLGILPDRIFYTAVVDHLCKTGKVDTA 416
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+F +M + G++PD +Y L+N F + A +L D+M G+ PD V + I+
Sbjct: 417 DSVFRDMVENGVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGG 476
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ +A V+ M+
Sbjct: 477 LIRGKKLSLACRVWDQMM 494
Score = 67.0 bits (162), Expect = 2e-09
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL PD + + GLC R+D AY L++ V++ +++ YN ++ G C + +A
Sbjct: 182 GLSPDFKACVALVVGLCGGGRVDLAYELVVGVIKGGVKVNILVYNALIDGFCRMGRVDKA 241
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
K+ M + G PD TY L+N EG + A +L++ M G+ PD Y ++
Sbjct: 242 MKIKAFMSRNGCVPDLVTYNTLLNYCCDEGMLDEALRLVETMERSGVEPDFYSYNELLKC 301
Query: 358 LSKTGKVDVAF 390
K VD A+
Sbjct: 302 FCKANMVDRAY 312
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = +1
Query: 19 YSFNQFLKGLCKA-NRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAYKLFE 192
+++++F+ LC A N L + LLLD+ + + D+ ++NT L LC + ++ A +LF
Sbjct: 82 FTYSRFISALCSAPNNLPLIHDLLLDMHALGFVPDIWAFNTYLSFLCRHNRLETALELFH 141
Query: 193 EMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTG 372
M +G PD +YTI++++ + + A ++ +TG G+ PD ++ L G
Sbjct: 142 SMPSEGREPDVVSYTIIVDALCKAQRYDEAARVWRGLTGKGLSPDFKACVALVVGLCGGG 201
Query: 373 KVDVAF 390
+VD+A+
Sbjct: 202 RVDLAY 207
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD + + LCK ++D A + M G+ DV+SYN ++ G C + A
Sbjct: 392 GILPDRIFYTAVVDHLCKTGKVDTADSVFRDMVENGVNPDVISYNALVNGFCKASRVMDA 451
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+L++EM + G+ PD T+ +++ ++ ++A ++ DQM G+ T+ H
Sbjct: 452 MRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLACRVWDQMMEKGL--------TLDKH 503
Query: 358 LSKT 369
LS+T
Sbjct: 504 LSET 507
Score = 57.8 bits (138), Expect = 1e-06
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ S+N + G CKA+R+ A L D M+ GL D V++ I+ GL G + A
Sbjct: 427 GVNPDVISYNALVNGFCKASRVMDAMRLYDEMQRNGLYPDEVTFKLIVGGLIRGKKLSLA 486
Query: 178 YKLFEEMFQKGISPDTRTYTILINS 252
+++++M +KG++ D L+N+
Sbjct: 487 CRVWDQMMEKGLTLDKHLSETLVNA 511
>ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 167 bits (424), Expect = 1e-39
Identities = 76/137 (55%), Positives = 103/137 (75%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
G+EPD+YS+NQ LKGLCKANRLDKAY L++ M KGLCD VSYNT++ LC ++AY
Sbjct: 284 GMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKGLCDTVSYNTVIGALCKSFATRKAY 343
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHL 360
+LFEEM QK ++PD T+ LI +FL EG+ ++AK LL MT ++PD +FYTT++D+
Sbjct: 344 RLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYF 403
Query: 361 SKTGKVDVAFGVFSDMV 411
KT K+++A GVF DM+
Sbjct: 404 CKTRKIEMAQGVFRDMI 420
Score = 68.9 bits (167), Expect = 6e-10
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDV--VSYNTILRGLCSGHHIKR 174
GL PD+ + + GLC ++D AY L V E+KG + +N+++ G C I +
Sbjct: 179 GLSPDMKACTALVVGLCDGGKVDLAYELT-VGEMKGEMKFNNLIFNSLMSGFCKSGRISK 237
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A + M + G PD TY IL+N F +A K + +M +G+ PD Y ++
Sbjct: 238 ALAIKSFMSKHGCEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLK 297
Query: 355 HLSKTGKVDVAFGVFSDM 408
L K ++D A+ + + M
Sbjct: 298 GLCKANRLDKAYKLMNTM 315
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 4 LEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
L PD+ + + CK +++ A + D++E+ DVVSYN ++ GLC + A
Sbjct: 389 LIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAM 448
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
L+EEM +G PD T+ ++I L++ ++A ++ DQM G D T+I
Sbjct: 449 LLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTLDKFLSETLI 505
Score = 60.5 bits (145), Expect = 2e-07
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L L + N L+ A D M KG DVV+Y I+ LC +A
Sbjct: 109 GYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKL-LDQMTGLGILPDCVFYTTIID 354
+ + M KG+SPD + T L+ G ++A +L + +M G + +F +++
Sbjct: 169 VEFWRCMVNKGLSPDMKACTALVVGLCDGGKVDLAYELTVGEMKGEMKFNNLIF-NSLMS 227
Query: 355 HLSKTGKVDVAFGVFSDM 408
K+G++ A + S M
Sbjct: 228 GFCKSGRISKALAIKSFM 245
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ LC+ LL+ M+ G L D+ ++N L L + ++ A K F+E
Sbjct: 80 FTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDE 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M KG PD TYTI+++ + + A + M G+ PD T ++ L GK
Sbjct: 140 MVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGK 199
Query: 376 VDVAF 390
VD+A+
Sbjct: 200 VDLAY 204
Score = 57.0 bits (136), Expect = 3e-06
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +1
Query: 25 FNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEEMF 201
+N+F+ L +R D A M +G +Y+ + LC + +L E+M
Sbjct: 47 YNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPFTYSRFISALCEIKNFGLIGRLLEDMK 106
Query: 202 QKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVD 381
Q G PD + I +N +E +A K D+M G PD V YT I+D L K + D
Sbjct: 107 QLGYLPDIWAFNIYLNLLFRENLLELALKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYD 166
Query: 382 VAFGVFSDMV 411
A + MV
Sbjct: 167 KAVEFWRCMV 176
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ PD+ S+N + GLCKA+++ +A LL + M+++G D V++ I+ GL + A
Sbjct: 423 GISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLA 482
Query: 178 YKLFEEMFQKGISPD 222
+++++M +KG + D
Sbjct: 483 CQVWDQMMEKGYTLD 497
>ref|XP_006417164.1| hypothetical protein EUTSA_v10007381mg [Eutrema salsugineum]
gi|557094935|gb|ESQ35517.1| hypothetical protein
EUTSA_v10007381mg [Eutrema salsugineum]
Length = 517
Score = 165 bits (417), Expect = 7e-39
Identities = 80/138 (57%), Positives = 104/138 (75%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++PD YS+NQ LK C+ DK Y L++ ME +G CDVVSY+T++ C + ++A
Sbjct: 285 GIQPDAYSYNQLLKRHCRVGVPDKCYSLMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM QKGI + TYT LI +FL+EGNS+VAKKLLDQMT LG+ PD +FYTTI+DH
Sbjct: 345 YKLFEEMRQKGIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+G VD A+GVF+DM+
Sbjct: 405 LCKSGNVDKAYGVFNDMI 422
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
GL PD + L LCK+ +DKAY + + M G+ D +SYN ++ GLC + A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHGITPDAISYNALISGLCRSCRVTEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
KLF++M K PD T+ +I ++E + A K+ DQM G D T+I
Sbjct: 450 MKLFKDMQSKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL--DVMEVKGLCDVVSYNTILRGLCSGHHIKR 174
G+ PD + + GLC A ++D AY ++ ++ + V YN ++ G C I++
Sbjct: 179 GINPDNKACASLVVGLCDARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCRAGRIEK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A L M + G SPD TY +L+N + A+ ++ +M GI PD Y ++
Sbjct: 239 AEALKSFMSKSGCSPDLVTYNVLLNYYYDHNMLKKAEGVMSEMVRSGIQPDAYSYNQLLK 298
Query: 355 HLSKTGKVDVAFGV 396
+ G D + +
Sbjct: 299 RHCRVGVPDKCYSL 312
Score = 66.6 bits (161), Expect = 3e-09
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLCK + D LL ME G + D+ ++N L LC + A + F
Sbjct: 80 FTYSRFISGLCKVRKFDLIDALLRDMETLGYIPDIWAFNIYLDLLCREREVGFAVQTFFC 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M ++G PD +YTILIN + G A + ++M GI PD +++ L K
Sbjct: 140 MVRRGREPDVVSYTILINGLFRAGKVTDAVEFWNEMIRSGINPDNKACASLVVGLCDARK 199
Query: 376 VDVAFGVFSDMV 411
VD+A+ + ++ +
Sbjct: 200 VDLAYEMVAEEI 211
Score = 65.9 bits (159), Expect = 5e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ ++ ++ +K + A LLD M GL D + Y TIL LC ++ +A
Sbjct: 355 GIVTNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M + GI+PD +Y LI+ + A KL M PD + + II
Sbjct: 415 YGVFNDMIEHGITPDAISYNALISGLCRSCRVTEAMKLFKDMQSKECCPDELTFKFIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A+ V+ M+
Sbjct: 475 LIREKKLSAAYKVWDQMM 492
>ref|XP_006483972.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568860947|ref|XP_006483973.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 517
Score = 161 bits (408), Expect = 7e-38
Identities = 78/138 (56%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYL-LLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+NQ LKGLC +N+LDKAY+ ++ ME KGL D VSYNT++ C G +RA
Sbjct: 284 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM ++GI D T+TILI +FL+EG+S +A+KLL+QM G+ + PD + YTTIID
Sbjct: 344 YKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDC 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+ ++ A+GVF DMV
Sbjct: 404 LCKSREIGTAYGVFLDMV 421
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 4 LEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
L PD + + LCK+ + AY + LD++E DV+SYN ++ GLC + A
Sbjct: 390 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 449
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L+EEM +G PD T+ +LI +QE +A +L DQM G D +I+
Sbjct: 450 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIE 507
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++PD + + GLC ++D AY L + M+ K V+ YN ++ G C I RA
Sbjct: 179 GIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVLIYNALISGFCRTGRICRA 238
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G PD TY ++N + E + A+KL+ +M GI PD Y ++
Sbjct: 239 MAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKG 298
Query: 358 LSKTGKVDVAF 390
L + ++D A+
Sbjct: 299 LCNSNQLDKAY 309
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+E D+ +F +K + A LL+ M L D + Y TI+ LC I A
Sbjct: 354 GIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTA 413
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M ++GI+PD +Y LIN + + A L ++M G PD V + +I
Sbjct: 414 YGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGG 473
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+++A ++ M+
Sbjct: 474 LVQEKKLELACRLWDQMM 491
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLC+ +LLD M+ G L D+ ++N L L + I A ++F +
Sbjct: 80 FTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHK 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M KG PD TYTI+I+ + + A + + M GI PD ++ L GK
Sbjct: 140 MVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGK 199
Query: 376 VDVAF 390
VD+A+
Sbjct: 200 VDLAY 204
Score = 61.6 bits (148), Expect = 1e-07
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L L NR+D A + M KG D V+Y ++ GLC +A
Sbjct: 109 GYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKL-LDQMTG---LGILPDCVFYTT 345
+ +E M + GI PD + L+ +G ++A +L + M G G+L Y
Sbjct: 169 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYELTVGAMKGKVEFGVL----IYNA 224
Query: 346 IIDHLSKTGKVDVAFGVFSDM 408
+I +TG++ A + S M
Sbjct: 225 LISGFCRTGRICRAMAIKSFM 245
>ref|XP_006438222.1| hypothetical protein CICLE_v10031251mg [Citrus clementina]
gi|557540418|gb|ESR51462.1| hypothetical protein
CICLE_v10031251mg [Citrus clementina]
Length = 517
Score = 161 bits (408), Expect = 7e-38
Identities = 78/138 (56%), Positives = 105/138 (76%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYL-LLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+EPD+YS+NQ LKGLC +N+LDKAY+ ++ ME KGL D VSYNT++ C G +RA
Sbjct: 284 GIEPDVYSYNQLLKGLCNSNQLDKAYMFMVKKMEAKGLRDKVSYNTVIEAFCKGGQTRRA 343
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM ++GI D T+TILI +FL+EG+S +A+KLL+QM G+ + PD + YTTIID
Sbjct: 344 YKLFEEMRRRGIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDC 403
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+ ++ A+GVF DMV
Sbjct: 404 LCKSREIGTAYGVFLDMV 421
Score = 71.6 bits (174), Expect = 1e-10
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Frame = +1
Query: 4 LEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
L PD + + LCK+ + AY + LD++E DV+SYN ++ GLC + A
Sbjct: 390 LSPDRILYTTIIDCLCKSREIGTAYGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAM 449
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
L+EEM +G PD T+ +LI +QE +A +L DQM G D +I+
Sbjct: 450 HLYEEMQIRGAHPDEVTFKLLIGGLVQEKKLELACRLWDQMMEKGFTLDKTVSAALIE 507
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++PD + + GLC ++D AY + M+ K V+ YN ++ G C I+RA
Sbjct: 179 GIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFGVLIYNALISGFCRTGRIRRA 238
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G PD TY ++N + E + A+KL+ +M GI PD Y ++
Sbjct: 239 MAIKSFMKRNGCEPDLVTYNAILNYYCDEVMLDEAEKLVMEMESCGIEPDVYSYNQLLKG 298
Query: 358 LSKTGKVDVAF 390
L + ++D A+
Sbjct: 299 LCNSNQLDKAY 309
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+E D+ +F +K + A LL+ M L D + Y TI+ LC I A
Sbjct: 354 GIELDVVTFTILIKAFLREGSSAMAEKLLNQMRGMNLSPDRILYTTIIDCLCKSREIGTA 413
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M ++GI+PD +Y LIN + + A L ++M G PD V + +I
Sbjct: 414 YGVFLDMVEQGITPDVISYNALINGLCKSSRVSEAMHLYEEMQIRGAHPDEVTFKLLIGG 473
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+++A ++ M+
Sbjct: 474 LVQEKKLELACRLWDQMM 491
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKG-LCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLC+ +LLD M+ G L D+ ++N L L + I A ++F +
Sbjct: 80 FTYSRFISGLCEVKNFTLINILLDNMDKLGYLPDIWAFNIYLNLLFHENRIDLALEVFHK 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M KG PD TYTI+I+ + + A + + M GI PD ++ L GK
Sbjct: 140 MVSKGREPDFVTYTIVIDGLCKAKKFDKAVQAWEHMIENGIKPDNKACAALVVGLCGDGK 199
Query: 376 VDVAF 390
VD+A+
Sbjct: 200 VDLAY 204
Score = 61.6 bits (148), Expect = 1e-07
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L L NR+D A + M KG D V+Y ++ GLC +A
Sbjct: 109 GYLPDIWAFNIYLNLLFHENRIDLALEVFHKMVSKGREPDFVTYTIVIDGLCKAKKFDKA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVA-KKLLDQMTG---LGILPDCVFYTT 345
+ +E M + GI PD + L+ +G ++A ++ + M G G+L Y
Sbjct: 169 VQAWEHMIENGIKPDNKACAALVVGLCGDGKVDLAYERTVGAMKGKVEFGVL----IYNA 224
Query: 346 IIDHLSKTGKVDVAFGVFSDM 408
+I +TG++ A + S M
Sbjct: 225 LISGFCRTGRIRRAMAIKSFM 245
>ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335822|gb|EFH66239.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 517
Score = 160 bits (405), Expect = 2e-37
Identities = 77/138 (55%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++ D YS+NQ LK C+ + D+ Y +L ME +G CDVVSY+T++ C + K+A
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM QKGI + T+T LI +FL+EGNS+VAKKLLDQMT LG+ PD +FYTTI+DH
Sbjct: 345 YKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+G VD A+G+F+DM+
Sbjct: 405 LCKSGNVDKAYGIFNDMI 422
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL PD + L LCK+ +DKAY + D++E + D +SYN+++ GLC + A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
KLFE+M K PD T+ +I ++E + A K+ DQM G D T+I
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ ++ +F +K + A LLD M GL D + Y TIL LC ++ +A
Sbjct: 355 GIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M + I+PD +Y LI+ + G A KL + M G PD + + II
Sbjct: 415 YGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A+ V+ M+
Sbjct: 475 LIREKKLSAAYKVWDQMM 492
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLCK + + LL ME G D+ ++N L LC + + A + F
Sbjct: 80 FTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFC 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M Q+G PD +YTILIN + G A ++ + M G+ PD ++ L K
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 376 VDVAFGVFSDMV 411
VD+A+ + ++ +
Sbjct: 200 VDLAYEMVAEEI 211
Score = 59.3 bits (142), Expect = 5e-07
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 37/174 (21%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ N++ A M +G DVVSY ++ GL + A
Sbjct: 109 GFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 178 YKLFEEMFQKGISPDTR------------------------------------TYTILIN 249
+++ M + G+SPD + Y LI+
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALIS 228
Query: 250 SFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVDVAFGVFSDMV 411
F + G A+ L M+ +G PD V Y ++++ + A GV ++MV
Sbjct: 229 GFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMV 282
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL--DVMEVKGLCDVVSYNTILRGLCSGHHIKR 174
G+ PD + + GLC A ++D AY ++ ++ + +V YN ++ G C I++
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
A L M + G PD TY +L+N + A+ ++ +M GI D Y ++
Sbjct: 239 AEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLL 297
>ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g13040, mitochondrial; Flags: Precursor
gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis
thaliana] gi|332190841|gb|AEE28962.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 158 bits (400), Expect = 6e-37
Identities = 76/138 (55%), Positives = 103/138 (74%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G++ D YS+NQ LK C+ + DK Y ++ ME +G CDVVSY+T++ C + ++A
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y+LFEEM QKG+ + TYT LI +FL+EGNS+VAKKLLDQMT LG+ PD +FYTTI+DH
Sbjct: 345 YRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+G VD A+GVF+DM+
Sbjct: 405 LCKSGNVDKAYGVFNDMI 422
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL PD + L LCK+ +DKAY + D++E + D +SYN+++ GLC + A
Sbjct: 390 GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
KLFE+M K PD T+ +I ++ + A K+ DQM G D T+I
Sbjct: 450 IKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 68.6 bits (166), Expect = 8e-10
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLCK + D LL ME G D+ ++N L LC + + A + F
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M Q+G PD +YTILIN + G A ++ + M G+ PD ++ L K
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 376 VDVAFGVFSDMV 411
VD+A+ + ++ +
Sbjct: 200 VDLAYEMVAEEI 211
Score = 67.8 bits (164), Expect = 1e-09
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ ++ ++ +K + A LLD M GL D + Y TIL LC ++ +A
Sbjct: 355 GMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M + I+PD +Y LI+ + G A KL + M G PD + + II
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ A+ V+ M+
Sbjct: 475 LIRGKKLSAAYKVWDQMM 492
Score = 60.5 bits (145), Expect = 2e-07
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 37/174 (21%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ N++ A M +G DVVSY ++ GL + A
Sbjct: 109 GFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 178 YKLFEEMFQKGISPD------------------------------------TRTYTILIN 249
+++ M + G+SPD T Y LI+
Sbjct: 169 VEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 250 SFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGKVDVAFGVFSDMV 411
F + G A+ L M+ +G PD V Y ++++ + A GV ++MV
Sbjct: 229 GFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL--DVMEVKGLCDVVSYNTILRGLCSGHHIKR 174
G+ PD + + GLC A ++D AY ++ ++ + V YN ++ G C I++
Sbjct: 179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEK 238
Query: 175 AYKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
A L M + G PD TY +L+N + A+ ++ +M GI D Y ++
Sbjct: 239 AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 355 HLSKTGKVDVAF 390
+ D +
Sbjct: 299 RHCRVSHPDKCY 310
>ref|XP_006304861.1| hypothetical protein CARUB_v10012598mg [Capsella rubella]
gi|482573572|gb|EOA37759.1| hypothetical protein
CARUB_v10012598mg [Capsella rubella]
Length = 517
Score = 158 bits (399), Expect = 8e-37
Identities = 77/138 (55%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+E D YS+NQ LK C+ + DK Y ++ ME +G CDVVSY+T++ C + ++A
Sbjct: 285 GVELDAYSYNQLLKRHCRVSHPDKCYSFMVKEMEPRGFCDVVSYSTLIETYCRASNTRKA 344
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKLFEEM QKGI + TYT LI +FL+EG S+VAKKLLDQMT LG+ PD +FYTTI++H
Sbjct: 345 YKLFEEMRQKGIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNH 404
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+G +D A+GVFSDM+
Sbjct: 405 LCKSGNIDKAYGVFSDMI 422
Score = 75.9 bits (185), Expect = 5e-12
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAY-LLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
GL PD + L LCK+ +DKAY + D++E + D +SYN+++ GLC + A
Sbjct: 390 GLSPDRIFYTTILNHLCKSGNIDKAYGVFSDMIEHRITPDAISYNSLICGLCRACRVTEA 449
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTII 351
KLFE+M K PD T+ +I ++E + A K+ DQM G D T+I
Sbjct: 450 IKLFEDMQSKECCPDELTFKFIIGGLIRENKVSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 68.6 bits (166), Expect = 8e-10
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GLCK + D LL ME G D+ ++N L LC + + A + F
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFC 139
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M Q+G PD +YTILIN + G A ++ ++M G+ PD ++ L K
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNEMIRSGVRPDNKACAALVVGLCHARK 199
Query: 376 VDVAFGVFSDMV 411
VD+A+ + ++ +
Sbjct: 200 VDLAYEMVAEEI 211
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G+ ++ ++ +K + + A LLD M GL D + Y TIL LC +I +A
Sbjct: 355 GIVTNVVTYTSLIKAFLREGKSSVAKKLLDQMTELGLSPDRIFYTTILNHLCKSGNIDKA 414
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
Y +F +M + I+PD +Y LI + A KL + M PD + + II
Sbjct: 415 YGVFSDMIEHRITPDAISYNSLICGLCRACRVTEAIKLFEDMQSKECCPDELTFKFIIGG 474
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + KV A+ V+ M+
Sbjct: 475 LIRENKVSAAYKVWDQMM 492
Score = 57.4 bits (137), Expect = 2e-06
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGL-CDVVSYNTILRGLCSGHHIKRA 177
G PDI++FN +L LC+ N++ A M +G DVVSY ++ GL + A
Sbjct: 109 GFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDA 168
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLL-DQMTGLGILPDCVFYTTIID 354
+++ EM + G+ PD + L+ ++A +++ +++ + V Y +I
Sbjct: 169 VEIWNEMIRSGVRPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Query: 355 HLSKTGKVDVAFGVFSDM 408
K G+++ A + S M
Sbjct: 229 GFCKAGRIEKAEALKSFM 246
>ref|XP_006836595.1| hypothetical protein AMTR_s00131p00098210 [Amborella trichopoda]
gi|548839134|gb|ERM99448.1| hypothetical protein
AMTR_s00131p00098210 [Amborella trichopoda]
Length = 704
Score = 145 bits (365), Expect = 7e-33
Identities = 74/138 (53%), Positives = 97/138 (70%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+ PD YS+N LKG C AN+LDKAYLLL D ME K + DVVSYNTI+ LC A
Sbjct: 447 GINPDKYSYNILLKGYCNANQLDKAYLLLVDKMESKEIFDVVSYNTIVGALCRVRRAGTA 506
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
YKL EEM KGISPD TY+ LIN F +EG+ ++A++L +Q+ +G +PD V YTT+ DH
Sbjct: 507 YKLMEEMSMKGISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTMFDH 566
Query: 358 LSKTGKVDVAFGVFSDMV 411
L K+G+V+ A +F +M+
Sbjct: 567 LCKSGRVEQARSLFFNMI 584
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLC-DVVSYNTILRGLCSGHHIKRA 177
G PD+ ++ LCK+ R+++A L M G+ D++SYN ++ GLC + A
Sbjct: 552 GFVPDVVTYTTMFDHLCKSGRVEQARSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEA 611
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIID 354
+++EEM G PD TY +LI L++ +A K+ DQM G++ D V ++D
Sbjct: 612 VEVYEEMVHGGCEPDEVTYHLLIGGLLRDEKLGMACKIWDQMMEKGLVLDTVVGEALVD 670
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/136 (27%), Positives = 68/136 (50%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDVVSYNTILRGLCSGHHIKRAY 180
G PDI+++N+++ LC+ N+LD A LL+ M + + V+Y I+ GLC + A
Sbjct: 273 GYAPDIWAYNKYMNSLCRLNKLDLALTLLEDMTRRIKPNPVTYTIIINGLCRKERFQSAL 332
Query: 181 KLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHL 360
+++ EM +KG PD L+ + ++A + ++ GI Y +I+
Sbjct: 333 EVWNEMIRKGFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGF 392
Query: 361 SKTGKVDVAFGVFSDM 408
G++D A + + M
Sbjct: 393 CSIGRIDKAQAIVAFM 408
Score = 66.2 bits (160), Expect = 4e-09
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Frame = +1
Query: 19 YSFNQFLKGLCKANRLDKAYLLL-DVMEVKGLCDVVSYNTILRGLCSGHHIKRAYKLFEE 195
+++++F+ GL AN L+ LL D+ ++ D+ +YN + LC + + A L E+
Sbjct: 244 FTYSRFISGLSDANDLEYIEKLLSDIYKMGYAPDIWAYNKYMNSLCRLNKLDLALTLLED 303
Query: 196 MFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDHLSKTGK 375
M ++ I P+ TYTI+IN ++ A ++ ++M G PD + T++ L K K
Sbjct: 304 MTRR-IKPNPVTYTIIINGLCRKERFQSALEVWNEMIRKGFEPDLIACGTLVFGLCKHSK 362
Query: 376 VDVAFGV 396
VD+A+GV
Sbjct: 363 VDLAYGV 369
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLDVMEVKGLCDVVS-YNTILRGLCSGHHIKRA 177
G EPD+ + + GLCK +++D AY + + +G+ YN ++ G CS I +A
Sbjct: 342 GFEPDLIACGTLVFGLCKHSKVDLAYGVAMRVITRGIALTTPVYNALINGFCSIGRIDKA 401
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
+ M + G +PD TY ++N E A+KL+++M GI PD Y ++
Sbjct: 402 QAIVAFMRRNGCTPDLVTYNTMLNYCCNENLVFEAEKLIEKMKRYGINPDKYSYNILLKG 461
Query: 358 LSKTGKVDVAFGVFSD 405
++D A+ + D
Sbjct: 462 YCNANQLDKAYLLLVD 477
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 1 GLEPDIYSFNQFLKGLCKANRLDKAYLLLD-VMEVKGLCDVVSYNTILRGLCSGHHIKRA 177
G+ PD+ +++ + G + +D A L + +++V + DVV+Y T+ LC +++A
Sbjct: 517 GISPDVVTYSSLINGFFREGHIDLAEELFNQILDVGFVPDVVTYTTMFDHLCKSGRVEQA 576
Query: 178 YKLFEEMFQKGISPDTRTYTILINSFLQEGNSNVAKKLLDQMTGLGILPDCVFYTTIIDH 357
LF M + G+ PD +Y LI+ + + A ++ ++M G PD V Y +I
Sbjct: 577 RSLFFNMIKNGVRPDMISYNALIDGLCKAFMVSEAVEVYEEMVHGGCEPDEVTYHLLIGG 636
Query: 358 LSKTGKVDVAFGVFSDMV 411
L + K+ +A ++ M+
Sbjct: 637 LLRDEKLGMACKIWDQMM 654