BLASTX nr result
ID: Achyranthes22_contig00016810
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Achyranthes22_contig00016810
(740 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEV42258.1| hypothetical protein [Beta vulgaris] 167 2e-59
gb|ABM55240.1| retrotransposon protein [Beta vulgaris] 157 2e-55
gb|EOY19088.1| Uncharacterized protein TCM_043787 [Theobroma cacao] 164 3e-54
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 164 1e-53
gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobrom... 164 1e-53
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 156 7e-51
gb|EOY19083.1| DNA/RNA polymerases superfamily protein [Theobrom... 153 2e-50
gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus pe... 153 3e-50
gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobrom... 155 2e-49
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 159 3e-47
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 158 5e-47
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 160 2e-46
gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao] 160 2e-46
gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subc... 132 6e-46
emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group] 132 6e-46
gb|EOY20371.1| Gag protease polyprotein-like protein [Theobroma ... 137 6e-46
gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [... 150 1e-45
gb|EOX94106.1| DNA/RNA polymerases superfamily protein [Theobrom... 143 2e-45
gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Ja... 132 2e-45
emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group] 132 3e-45
>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 167 bits (422), Expect(2) = 2e-59
Identities = 82/140 (58%), Positives = 102/140 (72%), Gaps = 2/140 (1%)
Frame = -2
Query: 418 RFSSEPSIKFVSTLKLNKLKKKGHQVYLCCVKDLTLEDKLN--DIPVVREFPDVFPEDLP 245
R EP IK ++ L+L KG +++C V+ + +D L D+P+VREF DVFPE++P
Sbjct: 514 RIPREPGIKVINALQLKNYVDKGWPLFMCSVRRVE-DDPLRPEDVPIVREFQDVFPEEIP 572
Query: 244 GLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPV 65
G+PP+RDVEF +DL+PGTGPISKA YRMAPA KG+IRPS+SPWGAPV
Sbjct: 573 GMPPRRDVEFTVDLVPGTGPISKATYRMAPAEMNELKNQLEELLDKGYIRPSMSPWGAPV 632
Query: 64 LFVRKKDGSLRLCIDYRELN 5
LFV+KKDGSLRLCIDYRELN
Sbjct: 633 LFVKKKDGSLRLCIDYRELN 652
Score = 89.7 bits (221), Expect(2) = 2e-59
Identities = 43/105 (40%), Positives = 64/105 (60%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVAS 553
+FD+GA SFI+ + L + +S + +P+G+ + CS+ F V L+I E F +
Sbjct: 409 LFDSGASLSFIAHATVRNLTLVESESISMPIVIPSGETVNCSKRFLKVPLKIGEGYFPSD 468
Query: 552 LIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYR 418
LI+F+L D+ILGMDWL K+ AR DC KV + +G RV+YR
Sbjct: 469 LIEFNLSNLDIILGMDWLGKYMARIDCDAQKVELKDPSGKRVSYR 513
>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 157 bits (398), Expect(2) = 2e-55
Identities = 77/140 (55%), Positives = 97/140 (69%), Gaps = 2/140 (1%)
Frame = -2
Query: 418 RFSSEPSIKFVSTLKLNKLKKKGHQVYLCCVKDLTLED--KLNDIPVVREFPDVFPEDLP 245
RF + +S L++ KL +KG +++ C V+D++ E KL D+ +V EF DVFP ++
Sbjct: 481 RFGKPKNFGVISALQVQKLMRKGCELFFCSVQDVSKEAELKLEDVSIVNEFMDVFPSEIS 540
Query: 244 GLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPV 65
G+PP R VEF IDL+PGT PISKAPYRMAP KG+IRPS SPWGAPV
Sbjct: 541 GMPPARAVEFTIDLVPGTAPISKAPYRMAPPEMSELKTQLQELLDKGYIRPSASPWGAPV 600
Query: 64 LFVRKKDGSLRLCIDYRELN 5
LFV+KKDGS+RLCIDYRELN
Sbjct: 601 LFVKKKDGSMRLCIDYRELN 620
Score = 85.5 bits (210), Expect(2) = 2e-55
Identities = 42/106 (39%), Positives = 66/106 (62%)
Frame = -3
Query: 735 TIFDTGAERSFISTNCAKKARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVA 556
T+FD+GA SFIS + K L + + V++P G+ + C++ F+N+ L+I F +
Sbjct: 375 TLFDSGATYSFISPSVLKSLGLVEHESIDLSVSIPTGEVVKCTKLFKNLPLKIGGSVFPS 434
Query: 555 SLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYR 418
LI+F+L + DVILGM+WLS ++AR DC KV + +G +YR
Sbjct: 435 ELIEFNLGDLDVILGMNWLSLYKARIDCEVQKVVLRNPSGKFTSYR 480
>gb|EOY19088.1| Uncharacterized protein TCM_043787 [Theobroma cacao]
Length = 649
Score = 164 bits (416), Expect(2) = 3e-54
Identities = 80/130 (61%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+P+V EFPDVFP+DLPGLPP R++EF
Sbjct: 282 ISAIKASKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFP 341
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+PGT PIS PYRMAPA KGFIRPS+SPWGAPVLFV+KKDG+LR
Sbjct: 342 IDLLPGTAPISIPPYRMAPAELKELKVQLQELVDKGFIRPSISPWGAPVLFVKKKDGTLR 401
Query: 31 LCIDYRELNK 2
LCIDYR+LN+
Sbjct: 402 LCIDYRQLNR 411
Score = 74.3 bits (181), Expect(2) = 3e-54
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKA--RLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST A A L+P++ + T P G+ + + + + +R+ E +
Sbjct: 164 YVLIDSGSDRSYVSTTFASIADRNLSPLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEE 222
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI ++++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 223 FRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEVVLRNSEGAEIVFVG 272
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 164 bits (414), Expect(2) = 1e-53
Identities = 79/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+P+V EFPDVFP+DLPG+PP R++EF
Sbjct: 522 ISAIKASKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGIPPNRELEFP 581
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+PGT PIS PYRMAPA KGFIRPS+SPWGAPVLFV+KKDG+LR
Sbjct: 582 IDLLPGTAPISIPPYRMAPAELKELKAQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLR 641
Query: 31 LCIDYRELNK 2
LCIDYR+LN+
Sbjct: 642 LCIDYRQLNR 651
Score = 73.6 bits (179), Expect(2) = 1e-53
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAK--KARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST A L+P++ +V P G+ + + + + +R+ E +
Sbjct: 404 YVLIDSGSDRSYVSTTFASITDRNLSPLEE-EIVVHTPLGEQLIRNTCYRDCGVRVGEEE 462
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI ++++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 463 FRGDLIPLEILDFDLILGMDWLTTHRANLDCFRKEVVLRNSEGAEIVFVG 512
>gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1336
Score = 164 bits (415), Expect(2) = 1e-53
Identities = 79/130 (60%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+P+V EFPDVFP+DLPGLPP R++EF
Sbjct: 472 ISAIKASKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFP 531
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+PGT PIS PYRMAPA KGFIRPS+SPWGAP+LFV+KKDG+LR
Sbjct: 532 IDLLPGTAPISIPPYRMAPAELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLR 591
Query: 31 LCIDYRELNK 2
LCIDYR+LN+
Sbjct: 592 LCIDYRQLNR 601
Score = 73.2 bits (178), Expect(2) = 1e-53
Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKA--RLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST A A L+P++ + T P G+ + + + + +R+ E +
Sbjct: 354 YVLIDSGSDRSYVSTTFASIAARNLSPLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEE 412
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI +++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 413 FRGDLIPLKILDFDLILGMDWLTTHRANVDCFRKEVVLRNSEGAEIVFVG 462
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 156 bits (395), Expect(2) = 7e-51
Identities = 76/130 (58%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+ +V EFPDVFP+DLPGLPP R++EF
Sbjct: 509 ISAIKASKLVQKGYSTYLAYVIDTSKGEPKLEDVSIVSEFPDVFPDDLPGLPPDRELEFP 568
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+PGT PIS PYRMAP KGFIRPS+SPWGAP+LFV+KKDG+LR
Sbjct: 569 IDLLPGTAPISIPPYRMAPTELKELKVQLQELVDKGFIRPSISPWGAPILFVKKKDGTLR 628
Query: 31 LCIDYRELNK 2
LCID R+LN+
Sbjct: 629 LCIDCRQLNR 638
Score = 71.2 bits (173), Expect(2) = 7e-51
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAK--KARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST L+P++ + T P G+ + + + + +R+ E +
Sbjct: 391 YVLIDSGSDRSYVSTTFVSIVDRNLSPLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEE 449
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI ++++FD+ILGMDWL+ HRA DC + ++ + S G + + G
Sbjct: 450 FRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEIVLRNSEGAEIVFVG 499
>gb|EOY19083.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 906
Score = 153 bits (386), Expect(2) = 2e-50
Identities = 75/130 (57%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K++KL +KG+ YL V D + E KL D+P+V EF DVFP++LP +PP R++EF
Sbjct: 555 ISAIKVSKLVQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFSDVFPDNLPRIPPNRELEFP 614
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+P T PIS PYRMAPA KGFIRPS+SPWGAPVLFV+KKDG+LR
Sbjct: 615 IDLLPSTVPISIPPYRMAPAELKELKAQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLR 674
Query: 31 LCIDYRELNK 2
LCIDYR+LN+
Sbjct: 675 LCIDYRQLNR 684
Score = 73.2 bits (178), Expect(2) = 2e-50
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAK--KARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST A L+P++ +V P G+ + + + + +R+ E +
Sbjct: 437 YVLIDSGSDRSYVSTTFASITDRNLSPLEE-EIVVHTPLGEQLIRNTCYRDCGVRVGEEE 495
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI ++++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 496 FRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEVVLRNSEGAEIVFVG 545
>gb|EMJ01464.1| hypothetical protein PRUPE_ppa015000mg [Prunus persica]
Length = 1493
Score = 153 bits (386), Expect(2) = 3e-50
Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 2/131 (1%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTLEDKLN--DIPVVREFPDVFPEDLPGLPPQRDVEF 215
+S + KL KKG++ YL + D T E LN DIPVV EFP++FP+DLPGLPP+R++EF
Sbjct: 495 ISAITAKKLLKKGYEGYLAHIID-TREITLNLEDIPVVCEFPNIFPDDLPGLPPKREIEF 553
Query: 214 GIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSL 35
ID +PGT PI + PYRMAPA FIRPSVSPWGAPVLFVRK+DG++
Sbjct: 554 TIDFLPGTNPIYQTPYRMAPAELRELKIQLQELVDLRFIRPSVSPWGAPVLFVRKQDGTM 613
Query: 34 RLCIDYRELNK 2
RLCIDYR+LNK
Sbjct: 614 RLCIDYRQLNK 624
Score = 72.8 bits (177), Expect(2) = 3e-50
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAK--KARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFV 559
+ D GA SF++ N R P+ G S ++LP G+ + R F N +++ +
Sbjct: 379 LIDPGATHSFVAHNFIPYISIRPTPITG-SFSISLPTGEVLYADRVFRNCFVQVDDAWLE 437
Query: 558 ASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
A+LI DL++ D+ILGMDWL KH A DC + +V++ +VT+RG
Sbjct: 438 ANLIPLDLVDLDIILGMDWLEKHHASVDCFRKEVTLRSPGQPKVTFRG 485
>gb|EOY21657.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1188
Score = 155 bits (393), Expect(2) = 2e-49
Identities = 77/130 (59%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+P+V EFPDVF +DLPGLPP R++EF
Sbjct: 500 ISAIKASKLVQKGYPAYLAYVIDTSKGEPKLEDVPIVSEFPDVFSDDLPGLPPDRELEFP 559
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+P T PIS PYRMAPA KGFIRPS+SPWGAPVLFV+KKDG+LR
Sbjct: 560 IDLLPSTAPISIPPYRMAPAELKELKVQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLR 619
Query: 31 LCIDYRELNK 2
LCI YR+LN+
Sbjct: 620 LCIYYRQLNR 629
Score = 67.4 bits (163), Expect(2) = 2e-49
Identities = 34/106 (32%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Frame = -3
Query: 726 DTGAERSFISTNCAK--KARLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVAS 553
D+G++RS++ST A L+P++G +V G+ + + + + +R+ E +F
Sbjct: 386 DSGSDRSYVSTTFASITNRNLSPLEG-EIIVHTHLGEQLIRNTCYRDCGVRVGEEEFRGD 444
Query: 552 LIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
LI ++++FD+ILGMDWL+ H A DC + +V + S G + + G
Sbjct: 445 LIPLEILDFDLILGMDWLTAHWANMDCFRKEVVLRNSEGAEIVFVG 490
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 159 bits (402), Expect(2) = 3e-47
Identities = 83/141 (58%), Positives = 100/141 (70%), Gaps = 1/141 (0%)
Frame = -2
Query: 421 SRFSSEPSIKFVSTLKLNKLKKKGHQVYLCCVKDLTLE-DKLNDIPVVREFPDVFPEDLP 245
S S+ P +F+S LK KL KG +L V D ++E +P+VREFP+VFP+DLP
Sbjct: 589 SSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQSVPIVREFPEVFPDDLP 648
Query: 244 GLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPV 65
G+PP+R+++FGIDLIP T PIS PYRMAPA KGFIRPSVSPWGAPV
Sbjct: 649 GIPPEREIDFGIDLIPDTRPISIPPYRMAPA----ELKELKDLLEKGFIRPSVSPWGAPV 704
Query: 64 LFVRKKDGSLRLCIDYRELNK 2
LFVRKKDGSLR+CIDYR+LNK
Sbjct: 705 LFVRKKDGSLRICIDYRQLNK 725
Score = 56.6 bits (135), Expect(2) = 3e-47
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKARLNPVDGVSTL-VTLPNGQGIPCSRSFENVTLRIAEVDF 562
Y + D GA SF++ A K + P V+ P G+ I R + + + I
Sbjct: 482 YALLDPGASLSFVTPYVANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPVSINHKST 541
Query: 561 VASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKV 457
+ LI+ D+++FDVILGMDWL A DCR V
Sbjct: 542 MVDLIELDMVDFDVILGMDWLHACYASIDCRTRVV 576
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 158 bits (400), Expect(2) = 5e-47
Identities = 83/141 (58%), Positives = 99/141 (70%), Gaps = 1/141 (0%)
Frame = -2
Query: 421 SRFSSEPSIKFVSTLKLNKLKKKGHQVYLCCVKDLTLE-DKLNDIPVVREFPDVFPEDLP 245
S S+ P +F+S LK KL KG +L V D ++E +P+VREFP+VFP DLP
Sbjct: 583 SSSSAVPKGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQSVPIVREFPEVFPNDLP 642
Query: 244 GLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPV 65
G+PP+R+++FGIDLIP T PIS PYRMAPA KGFIRPSVSPWGAPV
Sbjct: 643 GIPPEREIDFGIDLIPDTRPISIPPYRMAPA----ELKELKDLLEKGFIRPSVSPWGAPV 698
Query: 64 LFVRKKDGSLRLCIDYRELNK 2
LFVRKKDGSLR+CIDYR+LNK
Sbjct: 699 LFVRKKDGSLRMCIDYRQLNK 719
Score = 56.6 bits (135), Expect(2) = 5e-47
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKARLNPVDGVSTL-VTLPNGQGIPCSRSFENVTLRIAEVDF 562
Y + D GA SF++ A K + P V+ P G+ I R + + + I
Sbjct: 476 YALLDPGASLSFVTPYVANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPVSINHKST 535
Query: 561 VASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKV 457
+ LI+ D+++FDVILGMDWL A DCR V
Sbjct: 536 MVDLIELDMVDFDVILGMDWLHACYASIDCRTRVV 570
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 160 bits (406), Expect(2) = 2e-46
Identities = 82/141 (58%), Positives = 99/141 (70%), Gaps = 1/141 (0%)
Frame = -2
Query: 421 SRFSSEPSIKFVSTLKLNKLKKKGHQVYLCCVKDLTLE-DKLNDIPVVREFPDVFPEDLP 245
S S+ P +F+S LK KL KG +L V D ++E +P+VREFP VFP+DLP
Sbjct: 664 SSSSAVPKGRFISYLKARKLVSKGCIYHLVRVHDSSVEIPHFQSVPIVREFPKVFPDDLP 723
Query: 244 GLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPV 65
G+PP+R+++FGIDLIP T PIS PYRMAP+ KGFIRPSVSPWGAPV
Sbjct: 724 GIPPEREIDFGIDLIPDTHPISIPPYRMAPSELKELKEQLKDLLDKGFIRPSVSPWGAPV 783
Query: 64 LFVRKKDGSLRLCIDYRELNK 2
LFVRKKDGSLR+CIDYR+LNK
Sbjct: 784 LFVRKKDGSLRMCIDYRQLNK 804
Score = 52.4 bits (124), Expect(2) = 2e-46
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKARLNPVDGVSTL-VTLPNGQGIPCSRSFENVTLRIAEVDF 562
Y + D G SF++ A K + P V+ P G+ I R + + I
Sbjct: 557 YALLDPGVSLSFVTLYVANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPDSINHKST 616
Query: 561 VASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKV 457
+A L++ D+++FDVILGM+WL A DCR V
Sbjct: 617 MADLVELDMVDFDVILGMNWLHACYASLDCRTRVV 651
>gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao]
Length = 694
Score = 160 bits (404), Expect(2) = 2e-46
Identities = 78/130 (60%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+ST+K KL +KG+ YL V D + E KL D+P+V EFP+VFP DLPGLPP R++EF
Sbjct: 239 ISTIKALKLVQKGYPAYLAYVIDTSKGEPKLEDVPIVSEFPNVFPNDLPGLPPNRELEFP 298
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+PGT PIS PYRMAPA KGF RPS+SPWGAP+LFV+KKDG+LR
Sbjct: 299 IDLLPGTAPISIPPYRMAPAELKELKVQLQELVDKGFTRPSISPWGAPILFVKKKDGTLR 358
Query: 31 LCIDYRELNK 2
LCIDYR+LN+
Sbjct: 359 LCIDYRQLNR 368
Score = 52.8 bits (125), Expect(2) = 2e-46
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = -3
Query: 573 EVDFVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
E +F LI ++++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 177 EEEFRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEVVLRNSKGAEIVFVG 229
>gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1778
Score = 132 bits (331), Expect(2) = 6e-46
Identities = 59/100 (59%), Positives = 74/100 (74%)
Frame = -2
Query: 301 LNDIPVVREFPDVFPEDLPGLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXX 122
L +IP+V+++PDVFPEDLPG+PP+RD+EF IDL+PGT PI K PYRMA
Sbjct: 803 LQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVD 862
Query: 121 XXXXKGFIRPSVSPWGAPVLFVRKKDGSLRLCIDYRELNK 2
KG+IRPS SPWGAPV+FV KKD + R+C+DYR LN+
Sbjct: 863 DLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNE 902
Score = 79.3 bits (194), Expect(2) = 6e-46
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKARLNPVD-GVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVA 556
+FD+GA SF+S + A K + V G LV P Q +R +VT+ I EV F +
Sbjct: 683 LFDSGATHSFLSKSFAIKHGMEVVSLGRPLLVNTPGNQAFS-TRYCPSVTIEIEEVPFPS 741
Query: 555 SLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTY-------RGSVLNRV 397
SLI + + DVILGMDWLS+HR DC KV++ S G V++ G VLN+V
Sbjct: 742 SLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSFFASSPKSHGEVLNQV 801
>emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
Length = 1451
Score = 132 bits (331), Expect(2) = 6e-46
Identities = 59/100 (59%), Positives = 74/100 (74%)
Frame = -2
Query: 301 LNDIPVVREFPDVFPEDLPGLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXX 122
L +IP+V+++PDVFPEDLPG+PP+RD+EF IDL+PGT PI K PYRMA
Sbjct: 506 LQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVD 565
Query: 121 XXXXKGFIRPSVSPWGAPVLFVRKKDGSLRLCIDYRELNK 2
KG+IRPS SPWGAPV+FV KKD + R+C+DYR LN+
Sbjct: 566 DLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNE 605
Score = 79.3 bits (194), Expect(2) = 6e-46
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKARLNPVD-GVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVA 556
+FD+GA SF+S + A K + V G LV P Q + +R +VT+ I EV F +
Sbjct: 386 LFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQ-VFSTRYCPSVTIEIEEVPFPS 444
Query: 555 SLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTY-------RGSVLNRV 397
SLI + + DVILGMDWLS+HR DC KV++ S G V++ G VLN+V
Sbjct: 445 SLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNGETVSFFASSPKSLGGVLNQV 504
>gb|EOY20371.1| Gag protease polyprotein-like protein [Theobroma cacao]
Length = 665
Score = 137 bits (344), Expect(2) = 6e-46
Identities = 68/116 (58%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +KG+ YL V D + E KL D+P+V EFPDVFP+DLPGLPP R++EF
Sbjct: 525 ISAIKASKLVQKGYSTYLAYVIDTSKREPKLEDVPIVSEFPDVFPDDLPGLPPDRELEFP 584
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKD 44
IDL+ GT PIS PYRMAPA KGFIRPS+SPWGAPVLFV+KKD
Sbjct: 585 IDLLSGTAPISIPPYRMAPAELKELKVQLQELVDKGFIRPSISPWGAPVLFVKKKD 640
Score = 74.3 bits (181), Expect(2) = 6e-46
Identities = 37/110 (33%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Frame = -3
Query: 738 YTIFDTGAERSFISTNCAKKA--RLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVD 565
Y + D+G++RS++ST A A L+P++ + T P G+ + + + + +R+ E +
Sbjct: 407 YVLIDSGSDRSYVSTTFASIADRNLSPLEEEIVIHT-PLGEKLVRNSCYRDCGVRVGEEE 465
Query: 564 FVASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
F LI ++++FD+ILGMDWL+ HRA DC + +V + S G + + G
Sbjct: 466 FRGDLIPLEILDFDLILGMDWLTAHRANVDCFRKEVVLRNSKGAEIVFVG 515
>gb|EMJ11440.1| hypothetical protein PRUPE_ppa014973mg, partial [Prunus persica]
Length = 747
Score = 150 bits (380), Expect(2) = 1e-45
Identities = 73/130 (56%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTLED-KLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S + +L +KG Y+ V D +L DIP++++FPDVFPEDLPG+PPQR++EF
Sbjct: 300 ISAMTAKRLLRKGCSGYIAHVIDTRDNGLRLEDIPIIQDFPDVFPEDLPGVPPQREIEFV 359
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
I+L PGT PIS+APYRMAPA KGFI PS SPWGAPVLFV+KKDG++R
Sbjct: 360 IELAPGTNPISQAPYRMAPAELRELKTQLQELVDKGFICPSFSPWGAPVLFVKKKDGTMR 419
Query: 31 LCIDYRELNK 2
LC+DYR+LNK
Sbjct: 420 LCVDYRQLNK 429
Score = 59.3 bits (142), Expect(2) = 1e-45
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKA--RLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFV 559
+ D GA SF++ + A A RL+ + +++P G+ + + T+ + V
Sbjct: 184 LIDPGATHSFVTPSFAHNANVRLSALQ-TELAISVPTGEIFRIGTVYRDSTVMVGNVFLE 242
Query: 558 ASLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
A LI +++ DVILGMDWL++HRA DC + +V VT+ G
Sbjct: 243 ADLIPLGMVDLDVILGMDWLARHRASVDCFRKEVVFRSPGRHEVTFYG 290
>gb|EOX94106.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1119
Score = 143 bits (361), Expect(2) = 2e-45
Identities = 73/130 (56%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
Frame = -2
Query: 388 VSTLKLNKLKKKGHQVYLCCVKDLTL-EDKLNDIPVVREFPDVFPEDLPGLPPQRDVEFG 212
+S +K +KL +K + YL V D + E KL D+P+V EFPDVF +DLPGLP R++EF
Sbjct: 496 ISAIKASKLVQKRYPAYLAYVIDTSKGEHKLEDVPIVSEFPDVFLDDLPGLPLDRELEFP 555
Query: 211 IDLIPGTGPISKAPYRMAPAXXXXXXXXXXXXXXKGFIRPSVSPWGAPVLFVRKKDGSLR 32
IDL+P PIS PYRMA A KGFIRPS+SPWGAPVLFV+KKDG+LR
Sbjct: 556 IDLLPSIAPISIPPYRMALAELKELKVQLQDLVDKGFIRPSISPWGAPVLFVKKKDGTLR 615
Query: 31 LCIDYRELNK 2
LCIDY +LN+
Sbjct: 616 LCIDYHQLNR 625
Score = 66.2 bits (160), Expect(2) = 2e-45
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = -3
Query: 714 ERSFISTNCAKKA--RLNPVDGVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVASLIQF 541
+ S++ST A A L+P++G +V P G+ + + + + +R+ E +F LI
Sbjct: 386 QESYVSTTFASIADRNLSPLEG-EIVVHTPLGEQLIRNTCYRDCGVRVGEEEFRGDLIPL 444
Query: 540 DLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTYRG 415
++++FD+ILG+DWL+ HRA DC + KV + S G + + G
Sbjct: 445 EILDFDLILGIDWLTAHRANVDCFQKKVVLRNSKGAEIVFVG 486
>gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Japonica Group]
gi|78707943|gb|ABB46918.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1661
Score = 132 bits (331), Expect(2) = 2e-45
Identities = 59/100 (59%), Positives = 74/100 (74%)
Frame = -2
Query: 301 LNDIPVVREFPDVFPEDLPGLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXX 122
L +IP+V+++PDVFPEDLPG+PP+RD+EF IDL+PGT PI K PYRMA
Sbjct: 818 LQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVD 877
Query: 121 XXXXKGFIRPSVSPWGAPVLFVRKKDGSLRLCIDYRELNK 2
KG+IRPS SPWGAPV+FV KKD + R+C+DYR LN+
Sbjct: 878 DLIQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNE 917
Score = 77.4 bits (189), Expect(2) = 2e-45
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKARLNPVD-GVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVA 556
+FD+GA SF+ + A K + V G LV P Q +R +VT+ I EV F +
Sbjct: 698 LFDSGATHSFLCKSFAIKHGMEVVSLGRPLLVNTPGNQAFS-TRYCPSVTIEIEEVPFPS 756
Query: 555 SLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTY-------RGSVLNRV 397
SLI + + DVILGMDWLS+HR DC KV++ S G V++ G VLN+V
Sbjct: 757 SLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSFFASSPKSHGEVLNQV 816
>emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]
Length = 1481
Score = 132 bits (331), Expect(2) = 3e-45
Identities = 59/100 (59%), Positives = 74/100 (74%)
Frame = -2
Query: 301 LNDIPVVREFPDVFPEDLPGLPPQRDVEFGIDLIPGTGPISKAPYRMAPAXXXXXXXXXX 122
L +IP+V+++PDVFPEDLPG+PP+RD+EF IDL+PGT PI K PYRMA
Sbjct: 506 LQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVD 565
Query: 121 XXXXKGFIRPSVSPWGAPVLFVRKKDGSLRLCIDYRELNK 2
KG+IRPS SPWGAPV+FV KKD + R+C+DYR LN+
Sbjct: 566 DLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALNE 605
Score = 77.0 bits (188), Expect(2) = 3e-45
Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Frame = -3
Query: 732 IFDTGAERSFISTNCAKKARLNPVD-GVSTLVTLPNGQGIPCSRSFENVTLRIAEVDFVA 556
+FD+GA SF+S + A K + V G LV P Q + ++ +VT+ I EV F +
Sbjct: 386 LFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQ-VFSTQYCPSVTIEIEEVPFPS 444
Query: 555 SLIQFDLMEFDVILGMDWLSKHRARFDCRKHKVSMVGSTGTRVTY-------RGSVLNRV 397
SLI + + DVILGMDWLS+HR DC KV++ S G V++ G VLN+V
Sbjct: 445 SLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTNSNGETVSFFASSPKSPGVVLNQV 504