BLASTX nr result

ID: Acanthopanax23_contig00004031 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004031
         (1284 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010940856.1| PREDICTED: uncharacterized protein LOC105059...    52   2e-06
ref|XP_010942712.1| PREDICTED: 60 kDa jasmonate-induced protein ...    45   5e-06

>ref|XP_010940856.1| PREDICTED: uncharacterized protein LOC105059301 [Elaeis guineensis]
          Length = 507

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
 Frame = +1

Query: 793 VPVVSGQPIQLSRSVVAVPINSNLLVRAHLRTKDKD------FPSAKLLFPAQQSGVSEL 954
           + V  G+ I LSRSVVAVP+ S+L+VRA L  +D+D             FPAQ SG S+ 
Sbjct: 431 IEVSPGKHIPLSRSVVAVPLESSLIVRADLYDRDRDASPDDEIAKGTAEFPAQLSGTSQK 490

Query: 955 SIK---DTMQVKVTW 990
            I      ++VKVTW
Sbjct: 491 HISGQYGEIRVKVTW 505



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +2

Query: 605 IFDKPSSYTVLGKDNKCSVTILYALFREAIQAVVEVVWLK-DEELESGVYG 754
           ++DK   + V GK    SVT+ YA+  +A QA VEV  +  D E  + VYG
Sbjct: 361 VYDKLLFHDVDGKYG--SVTVSYAVLSDAAQATVEVTLINGDGEDPADVYG 409


>ref|XP_010942712.1| PREDICTED: 60 kDa jasmonate-induced protein [Elaeis guineensis]
          Length = 501

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
 Frame = +1

Query: 784 SRSVPVVSGQPIQLSRSVVAVPINSNLLVRAHLRTKDKDFPSAKLL------FPAQQSGV 945
           S  + V  GQ I LSRSVVAVP NS+L+V A L     D  S   +      FP++  G 
Sbjct: 420 SERIDVRPGQLIPLSRSVVAVPSNSSLVVEADLYDHRSDASSGDEIAKGTAEFPSKLQGT 479

Query: 946 SELSI---KDTMQVKVTW 990
            E  I   K  ++VKVTW
Sbjct: 480 YEKIIQGKKGKIRVKVTW 497



 Score = 35.4 bits (80), Expect(2) = 5e-06
 Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +2

Query: 584 VYNPSEEIFDKPSSYTVLGKDNKCSVTILYALFREAIQAVVEVVWLK-DEELESGVYGLI 760
           VYN S E +DKP    V GK+   SVT+ YA+  +A +A VEV  +  D +  + VYG +
Sbjct: 347 VYNTSNE-YDKPLFRNVDGKNG--SVTVNYAVLSDAAEAAVEVTLIDGDGKNPAHVYGRL 403

Query: 761 A 763
           +
Sbjct: 404 S 404


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