BLASTX nr result

ID: Acanthopanax22_contig00000085 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax22_contig00000085
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022989187.1| protodermal factor 1-like isoform X1 [Cucurb...    48   8e-07
ref|XP_022989188.1| leucine-rich repeat extensin-like protein 5 ...    48   8e-07
gb|PNW78832.1| hypothetical protein CHLRE_09g391615v5 [Chlamydom...    45   7e-06

>ref|XP_022989187.1| protodermal factor 1-like isoform X1 [Cucurbita maxima]
          Length = 575

 Score = 48.1 bits (113), Expect(2) = 8e-07
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = -3

Query: 380 FAQPTSQPPPAPLTSHSPSAPTPLSSQPHSPNTPTPSA------YLSPPFAPLSPT-SSQ 222
           ++ PT  P P P T  +P+  TP +  P +P+TPTPSA      Y SPP    +PT S+ 
Sbjct: 218 YSPPTYDPTPTPSTPSTPTPSTPSTPTPSTPSTPTPSAPSGGGGYYSPPTYDPTPTPSTP 277

Query: 221 TP 216
           TP
Sbjct: 278 TP 279



 Score = 32.3 bits (72), Expect(2) = 8e-07
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -2

Query: 174 PQPSVHLLCPAPQLQSTPSPSVPPAIRAFHSTSLHLTAPSSSTSQRPFPQPAQARYP 4
           P PS     P P   STP+PS P     ++S   +   P+ ST   P P       P
Sbjct: 272 PTPST----PTPSTPSTPTPSAPSGGGGYYSPPTYDPTPTPSTPSTPTPSTPSTPTP 324


>ref|XP_022989188.1| leucine-rich repeat extensin-like protein 5 isoform X2 [Cucurbita
           maxima]
          Length = 562

 Score = 48.1 bits (113), Expect(2) = 8e-07
 Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
 Frame = -3

Query: 380 FAQPTSQPPPAPLTSHSPSAPTPLSSQPHSPNTPTPSA------YLSPPFAPLSPT-SSQ 222
           ++ PT  P P P T  +P+  TP +  P +P+TPTPSA      Y SPP    +PT S+ 
Sbjct: 205 YSPPTYDPTPTPSTPSTPTPSTPSTPTPSTPSTPTPSAPSGGGGYYSPPTYDPTPTPSTP 264

Query: 221 TP 216
           TP
Sbjct: 265 TP 266



 Score = 32.3 bits (72), Expect(2) = 8e-07
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -2

Query: 174 PQPSVHLLCPAPQLQSTPSPSVPPAIRAFHSTSLHLTAPSSSTSQRPFPQPAQARYP 4
           P PS     P P   STP+PS P     ++S   +   P+ ST   P P       P
Sbjct: 259 PTPST----PTPSTPSTPTPSAPSGGGGYYSPPTYDPTPTPSTPSTPTPSTPSTPTP 311


>gb|PNW78832.1| hypothetical protein CHLRE_09g391615v5 [Chlamydomonas reinhardtii]
          Length = 294

 Score = 44.7 bits (104), Expect(2) = 7e-06
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -3

Query: 374 QPTSQPPPAPLTSH--SPSAPTPLSSQPHSPNTPTPSAYLSPPFAPLSPTSSQTP 216
           QP S  PP+P +    SP+ P+P S QP SP  P P +   P  AP SP S Q P
Sbjct: 130 QPPSPAPPSPPSPQPPSPAPPSPPSPQPPSPAPPLPPSPQPPSPAPPSPPSPQPP 184



 Score = 32.7 bits (73), Expect(2) = 7e-06
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 168 PSVHLLCPAPQLQSTPSPSVPPAIRAFHSTSLHLTAPSSSTSQRPFPQPA 19
           PS     PAP +  +PSPS P   R    +     +PS S S+ P P PA
Sbjct: 205 PSPQPPSPAPPVPPSPSPSPPTPPRPPSPSPSPSPSPSPSPSRSPSPSPA 254


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